Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I3 R1
|
53 |
201.3 |
10250884 |
92.1% |
9441064 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,245,958 |
C→T |
R271H (CGC→CAC) |
cirA ← |
colicin IA outer membrane receptor and translocator; ferric iron‑catecholate transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,245,958 | 0 | C | T | 98.2%
| 564.9
/ NA
| 170 | R271H (CGC→CAC) | cirA | colicin IA outer membrane receptor and translocator; ferric iron‑catecholate transporter |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (74/92); minor base G (1/2); total (76/94) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 172 total aligned reads displayed.
GTTTTTGTTCTCGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGCGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCAAATTCGA > NC_000913/2245861‑2246054
|
gTTTTTGTTCTCGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTgg < 2:4436196/100‑1 (MQ=255)
tttttGTTCTCGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAggtggt < 2:4988756/100‑1 (MQ=255)
ttttGTTCTCGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGtt > 1:2532311/1‑100 (MQ=255)
tttGTTCTCGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGctt > 1:4336781/1‑100 (MQ=255)
ttGTTCTCGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGtttt < 1:1899477/100‑1 (MQ=255)
gTTCTCGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTg > 2:4114341/1‑100 (MQ=255)
ttCTCGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGt > 2:2002975/1‑100 (MQ=255)
ttCTCGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGt < 1:3013604/100‑1 (MQ=255)
tctcGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTc > 2:3243178/1‑100 (MQ=255)
ctcGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTcc < 1:3962159/100‑1 (MQ=255)
tcGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCa > 2:1754161/1‑100 (MQ=255)
tcGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCa > 1:801188/1‑100 (MQ=255)
cGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAg > 2:3725549/1‑100 (MQ=255)
gACTTTCTGACCGTGGTATTTCAGTTCGCTGGTGCCGTAATGCCAACGCCAATTTTGGACGACGGAGTAGTTGTTGCGTGCCAGGGGGGTTTTGTCCAGc > 2:3518501/1‑100 (MQ=255)
gACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCATCGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGc < 2:4758276/100‑1 (MQ=255)
gACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGc < 1:3130662/100‑1 (MQ=255)
gACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGc < 1:3442514/100‑1 (MQ=255)
gACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGc > 1:2456500/1‑100 (MQ=255)
aCTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCg < 1:521651/100‑1 (MQ=255)
aCTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCg < 2:2893479/100‑1 (MQ=255)
ctcACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCg < 2:583038/100‑1 (MQ=255)
ctcACCGTAGTATTTCAGTTCGCTGATGCCGTCATCACAACGCCCATTATGGCTCACGCAGTAGTTCTGACGTTCCAAGTGGTCTTTCTCCAACGAGTCg > 2:3330085/1‑100 (MQ=255)
tcACCGTAGTATTTCAGTGCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCgg < 1:1915407/100‑1 (MQ=255)
ccGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAAt > 1:4656026/1‑100 (MQ=255)
ccGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAAt > 2:2422878/1‑100 (MQ=255)
ccGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAAt > 2:23814/1‑100 (MQ=255)
ccGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAAt < 1:2241676/100‑1 (MQ=255)
gtagtaTTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCa > 2:4015522/1‑100 (MQ=255)
agtaTTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACg < 1:1080131/100‑1 (MQ=255)
agtaTTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACg > 2:3526139/1‑100 (MQ=255)
aTTTCAGTTCGCTGGTGTCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATc > 1:1594779/1‑100 (MQ=255)
ttCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCt > 1:850378/1‑100 (MQ=255)
ttCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCt < 1:3987075/100‑1 (MQ=255)
tCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTg > 1:1918924/1‑100 (MQ=255)
aGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGAc < 1:3565216/100‑1 (MQ=255)
gTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGCGTCGGAATCACGATCCTGACg > 2:3881383/1‑100 (MQ=255)
gTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACg > 2:2162976/1‑100 (MQ=255)
ttCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACgg < 1:3199570/100‑1 (MQ=255)
tCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGt < 2:1828601/100‑1 (MQ=255)
gCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCg < 1:4437487/100‑1 (MQ=255)
cTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGa < 1:195454/100‑1 (MQ=255)
tGGTACCGTAATCCCAACGCCCATTATGGCTGACGGAGGAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGaa > 2:2694332/1‑100 (MQ=255)
ggTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGaaa < 2:2725613/100‑1 (MQ=255)
gTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTGCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAAc < 1:2473632/100‑1 (MQ=255)
gCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCg < 2:3080939/100‑1 (MQ=255)
gCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCg < 2:3468167/100‑1 (MQ=255)
ccGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGt > 1:1461525/1‑100 (MQ=255)
ccGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGt > 2:3642151/1‑100 (MQ=255)
cGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTa > 2:3238610/1‑100 (MQ=255)
gTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTAt < 2:2889974/100‑1 (MQ=255)
gTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTAt > 1:1197040/1‑100 (MQ=255)
tAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATc > 2:1381455/1‑100 (MQ=255)
aaTCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGCTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATcc < 2:715939/100‑1 (MQ=255)
cccAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGc < 1:1633081/100‑1 (MQ=255)
cccAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGc > 2:2603648/1‑100 (MQ=255)
cccAACGCCCATTATGACTGACGGAGGAGTTCTGGCGTTCCAGGCGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGc > 1:4519277/1‑100 (MQ=255)
aaCGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGt > 2:1504974/1‑100 (MQ=255)
aaCGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGt > 2:4670755/1‑100 (MQ=255)
aaCGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGt < 2:4380987/100‑1 (MQ=255)
gCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTaaa < 2:1737591/100‑1 (MQ=255)
cccATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTaaaa > 1:3914113/1‑100 (MQ=255)
cATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATc > 2:2320155/1‑100 (MQ=255)
cATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATc < 1:2177587/100‑1 (MQ=255)
aTTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCg < 2:4644146/100‑1 (MQ=255)
tATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTg < 2:1431514/100‑1 (MQ=255)
tATGGCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTg < 1:2028154/100‑1 (MQ=255)
ggCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGAtt > 1:626/1‑100 (MQ=255)
ggCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGAtt > 1:2771264/1‑100 (MQ=255)
ggCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGAtt < 1:1760496/100‑1 (MQ=255)
gCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGAttt > 1:2942903/1‑100 (MQ=255)
gCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGAttt < 1:3279606/100‑1 (MQ=255)
gCTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGAttt > 1:3905209/1‑100 (MQ=255)
cTGACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGAtttt < 1:4516489/100‑1 (MQ=255)
gACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGa > 1:2892272/1‑100 (MQ=255)
gACGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGa < 2:3418032/100‑1 (MQ=255)
aCGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGATACCGTATCCGGCAGTAAAATCGTGATTTTGAt < 2:4577694/100‑1 (MQ=255)
aCGGAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGAt < 2:2384206/100‑1 (MQ=255)
gAGTAGTTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCg < 2:4463974/100‑1 (MQ=255)
agtagtTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCgg < 2:837015/100‑1 (MQ=255)
gtagtTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGTCAGTAAAATCGTGATTTTGATTCgct < 2:2151080/100‑3 (MQ=255)
gtagtTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGgt < 2:2859952/100‑1 (MQ=255)
gtagtTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAAACGTGATTTTGATTCGgt > 1:511067/1‑100 (MQ=255)
gtTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTc > 1:3164903/1‑100 (MQ=255)
gtTCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGACGGAATCACGATCCTGACTGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTc > 1:4781913/1‑100 (MQ=255)
ttCTGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTcc < 1:5147009/100‑1 (MQ=255)
tGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAgg < 2:246211/100‑1 (MQ=255)
tGGCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAgg < 1:2633789/100‑1 (MQ=255)
tGGCGTTCCAGGGGGTGTTTGTCCAGCAAGCCGGAATTACGACCCGGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAgg < 2:3568332/100‑1 (MQ=255)
ggCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGAGTTTGATTCGGTGTCCAGGc > 2:3629104/1‑100 (MQ=255)
gCGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCa < 2:3943054/100‑1 (MQ=255)
cGTTCCAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCaa > 1:3403022/1‑100 (MQ=255)
ccAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCAAATTc < 2:4209089/100‑1 (MQ=255)
ccAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCAAATTc > 2:2404254/1‑100 (MQ=255)
ccAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCAAAGTc > 2:1608125/1‑100 (MQ=255)
cAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCAAATTCg > 2:2736333/1‑100 (MQ=255)
cAGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCAAATTCg < 2:58357/100‑1 (MQ=255)
aGGTGGTTTTTGTCTAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTACAATCCTGCTTTTGTTTCGGTGTCCAGGCAGATTCGa > 2:459140/1‑100 (MQ=255)
aGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCAAATTCGa > 2:3287964/1‑100 (MQ=255)
aGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCAAATTCGa > 1:577853/1‑100 (MQ=255)
aGGTGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCAAATTCGa > 1:417050/1‑100 (MQ=255)
|
GTTTTTGTTCTCGACTTTCTCACCGTAGTATTTCAGTTCGCTGGTGCCGTAATCCCAACGCCCATTATGGCTGACGGAGTAGTTCTGGCGTTCCAGGCGGTTTTTGTCCAGCGAGTCGGAATCACGATCCTGACGGTCGAAACCGTATCCGGCAGTAAAATCGTGATTTTGATTCGGTGTCCAGGCAAATTCGA > NC_000913/2245861‑2246054
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
