Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I3 R1
|
53 |
201.3 |
10250884 |
92.1% |
9441064 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,653,277 |
T→C |
Y262H (TAC→CAC) |
sseA → |
3‑mercaptopyruvate sulfurtransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,653,277 | 0 | T | C | 98.0%
| 709.0
/ ‑1.2
| 204 | Y262H (TAC→CAC) | sseA | 3‑mercaptopyruvate sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base T (3/1); new base C (110/89); total (113/91) |
| Fisher's exact test for biased strand distribution p-value = 6.31e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 204 total aligned reads displayed.
CTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTT > NC_000913/2653180‑2653372
|
cTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCac < 2:432534/100‑1 (MQ=255)
cGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCacgac < 1:3301236/100‑1 (MQ=255)
cGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCacgac > 2:2556213/1‑100 (MQ=255)
cGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCacgac < 2:2591826/100‑1 (MQ=255)
gACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCacgacg > 1:3740065/1‑100 (MQ=255)
aCAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACgg > 2:1471454/1‑100 (MQ=255)
aaaCCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGgcg > 1:283327/1‑100 (MQ=255)
aaaCCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGgcg > 2:3209581/1‑100 (MQ=255)
aCCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCa > 1:3258644/1‑100 (MQ=255)
aCCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCa > 2:2474211/1‑100 (MQ=255)
cAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTGGTTAGCACTAGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATg < 2:4571797/100‑1 (MQ=255)
aaTTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATgg < 2:2935397/100‑1 (MQ=255)
ttATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAg > 2:3160731/1‑100 (MQ=255)
tATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGt > 1:1511937/1‑100 (MQ=255)
tATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGt < 1:3913972/100‑1 (MQ=255)
tATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGt < 2:2433983/100‑1 (MQ=255)
cGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGaa > 1:1084146/1‑100 (MQ=255)
cGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGaa < 2:3040580/100‑1 (MQ=255)
gTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAAt > 2:2233836/1‑100 (MQ=255)
gTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAAt > 1:3217280/1‑100 (MQ=255)
cAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATgg < 2:713983/100‑1 (MQ=255)
aGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATggg < 2:3792592/100‑1 (MQ=255)
aGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATggg > 1:403434/1‑100 (MQ=255)
gCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATgggg < 2:3390234/100‑1 (MQ=255)
gCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATgggg > 2:4760460/1‑100 (MQ=255)
gCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATgggg < 2:2501735/100‑1 (MQ=255)
gCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATgggg < 1:4277161/100‑1 (MQ=255)
cTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGgc < 2:134411/100‑1 (MQ=255)
ggCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGgcgcgc > 2:1537301/1‑100 (MQ=255)
tctGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCggg < 1:4340629/100‑1 (MQ=255)
tGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCa > 2:2075584/1‑100 (MQ=255)
ggTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAg > 1:3167827/1‑100 (MQ=255)
gtgtAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGa < 2:3444438/100‑1 (MQ=255)
gtgtAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGa < 1:2126455/100‑1 (MQ=255)
tgtAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGAt < 1:964294/100‑1 (MQ=255)
tgtAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGAt < 1:685759/100‑1 (MQ=255)
gtAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGAtt > 1:3404458/1‑100 (MQ=255)
aCGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTAc > 2:1389006/1‑100 (MQ=255)
cGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTAcc < 2:1213513/100‑1 (MQ=255)
cGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTAcc > 1:4774471/1‑100 (MQ=255)
cGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTAcc > 1:2097520/1‑100 (MQ=255)
cAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGt < 1:789130/100‑1 (MQ=255)
aGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGtt < 2:41745/100‑1 (MQ=255)
gCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTg > 1:4249249/1‑100 (MQ=255)
cGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAg < 2:4560074/100‑1 (MQ=255)
gTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGc > 2:3256329/1‑100 (MQ=255)
gTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAg > 2:30764/1‑100 (MQ=255)
gTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGGGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAg > 1:1721418/1‑100 (MQ=255)
ttttGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGt > 2:3020964/1‑100 (MQ=255)
tttGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTg > 1:2530457/1‑100 (MQ=255)
tttGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTg < 1:31126/100‑1 (MQ=255)
tttGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTg < 2:1698484/100‑1 (MQ=255)
ttGTTAGCACTCGCGACGCTGGATGTGCCAACCGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGa < 1:2059147/100‑1 (MQ=255)
ttGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGa > 1:4995841/1‑100 (MQ=255)
tGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGaa > 1:3028214/1‑100 (MQ=255)
gTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGaaa < 2:4194244/100‑1 (MQ=255)
ttAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAAt < 2:1062312/100‑1 (MQ=255)
tAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATa > 2:3960323/1‑100 (MQ=255)
tAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATa < 1:4625833/100‑1 (MQ=255)
aGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGagatcg > 1:3289038/1‑95 (MQ=255)
aGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATaa > 2:5028167/1‑100 (MQ=255)
gCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAg < 2:4367226/100‑1 (MQ=255)
gCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAg < 2:3886814/100‑1 (MQ=255)
gCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAg < 1:1415988/100‑1 (MQ=255)
cACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGt > 1:3127533/1‑100 (MQ=255)
cACTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGt < 2:1265233/100‑1 (MQ=255)
cTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTAt > 1:1967132/1‑100 (MQ=255)
cTCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTAt > 1:4542388/1‑100 (MQ=255)
tCGCGACGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTAtt < 2:464395/100‑1 (MQ=255)
gACGCTGGATGTGCCAAACGTGAAACTGCACGACGGGGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTAc < 2:358657/100‑1 (MQ=255)
aCGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACa > 2:2690726/1‑100 (MQ=255)
cGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAg > 2:1789374/1‑100 (MQ=255)
cGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAg > 2:1169853/1‑100 (MQ=255)
cGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAg < 1:1295546/100‑1 (MQ=255)
cGCTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAg > 2:3781974/1‑100 (MQ=255)
cTGGATGTGCCAAACGTGAAACTGCACGACGTCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGc > 1:4138929/1‑100 (MQ=255)
cTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGc < 2:784909/100‑1 (MQ=255)
cTGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGc > 1:3457685/1‑100 (MQ=255)
tGGATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCa < 1:2272906/100‑1 (MQ=255)
ggATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCaa < 2:3419566/100‑1 (MQ=255)
ggATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCaa > 1:1144646/1‑100 (MQ=255)
ggATGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCaa > 2:2122083/1‑100 (MQ=255)
aTGTGCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATa < 2:1991717/100‑1 (MQ=255)
gtgCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATaaa < 1:2310857/100‑1 (MQ=255)
gtgCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATaaa > 1:3791199/1‑100 (MQ=255)
tgCCAAACGTGATACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCTGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATaaaa > 2:4897057/1‑100 (MQ=255)
tgCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATaaaa > 1:4901348/1‑100 (MQ=255)
gCCAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATaaaaa < 2:1942417/100‑1 (MQ=255)
cAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAAc > 2:4477224/1‑100 (MQ=255)
cAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAAc < 1:1382664/100‑1 (MQ=255)
cAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAAc < 1:1863141/100‑1 (MQ=255)
cAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAAc < 1:952686/100‑1 (MQ=255)
cAAACGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAAc < 1:4713454/100‑1 (MQ=255)
cAAACGTGAAACTGCACGACGGCGCATGGAGGGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGCATTTTACAGGCAATAaacaac > 1:2365597/1‑100 (MQ=255)
tatcGTGAAACGGCACGACGGTTCTGTGAGGGAAGGGGGCGCGCTGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAAcc < 1:5165310/97‑1 (MQ=255)
cGTGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAAccgcc < 1:539327/100‑1 (MQ=255)
tGAAACTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGa > 1:922237/1‑100 (MQ=255)
aCTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAAttt < 2:4091084/100‑1 (MQ=255)
aCTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAAttt > 2:683326/1‑100 (MQ=255)
aCTGCACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTCGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAAttt > 1:5113827/1‑100 (MQ=255)
|
CTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTT > NC_000913/2653180‑2653372
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
