Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F23 I0 R1 26 121.0 2321878 93.0% 2159346 257.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,815,937 C→A 7.3% E205* (GAA→TAA)  rph ← truncated RNase PH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,815,9370CA 7.3% 373.6 / 15.9 116E205* (GAA→TAA) rphtruncated RNase PH
Reads supporting (aligned to +/- strand):  ref base C (53/54);  new base A (6/3);  total (59/57)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.86e-01

Only 100 of 116 total aligned reads displayed.

GGCGTTGAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCGCAGTCCAGCG  >  NC_000913/3815658‑3816212
                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                   
ggCGTTGAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAA‑GCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTg                                                                                                                                                                                                                                                                                   <  1:650148/281‑1 (MQ=255)
           aaTAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACCCCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAA‑GCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTg                                                                                                                                                                                                                                                                         <  1:763118/280‑1 (MQ=255)
           aaTAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTg                                                                                                                                                                                                                                                                         <  1:1147054/281‑1 (MQ=255)
            attggggTTTTTGCTCCCGGATTTCAGCGTAAACCCTCCAAACTTTACCACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGGCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTg                                                                                                                                                                                                                                                                         <  2:917046/277‑1 (MQ=255)
             gaGGGGCTTGTGCCCCCGGATTTCAGCGTAAACCGGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATAGGGTTTCATGCCTTCCCTCCTCATCTTGCGTTTCAGCAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCa                                                                                                                                                                                                                                                                       <  2:261823/280‑1 (MQ=255)
             aaGGCGCTTTTGCGCCCGGATTGCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGGGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTAGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTg                                                                                                                                                                                                                                                                         <  1:510691/278‑1 (MQ=255)
                     tttGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATAGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCCCTTCAT‑GGGTGAACGGCTGGCCTTAGCCCGTCCCCTCCACTTCaa                                                                                                                                                                                                                                                                 >  1:875530/1‑280 (MQ=255)
                      ttGCGCCCGGATTTCAGCGTAAACTCGCCAAACCTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTAGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGCTTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAatga                                                                                                                                                                                                                                                              >  1:903635/1‑281 (MQ=255)
                            cccggtttcaggcgaaaCCCGCCCAACTTTAACCCCCGCTTGCTAAGCCCAAATTCCATAAACTGGCGCTGTTTTGGTTTCATGCCTTCGCTCCTCCTCTTTCTTTTCCACAGACAAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATAGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTATGCCGTCCCCTGCACTTCAATGATgcg                                                                                                                                                                                                                                                          <  2:875530/266‑1 (MQ=255)
                                            gcTCGCCCAATTGTAACACTTGCTTGCTAGGCGCAAATTGAATAAGCTGGCACTGATATGGTTTCATGCCTTCGCGCCTCATCTTACTTTGCAGCAGAC‑AAAGAAAAGGCGACTCATCAGCCGCCTTACAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACGATGGATTCGATT‑CCCTCGGGCCAGAGCCAACAACATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCTGTCCCCTGCACTTCAAGGATGCGCCCGTCTTCGGTCATCACt                                                                                                                                                                                                                                       <  2:682422/280‑1 (MQ=255)
                                            aCTCGCCCAACTTTAACCCCTGCTTACGTAGCGCAAATTCAATAAACGGGCGTTAATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCGACAGAC‑AAAAAAAA‑GCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACt                                                                                                                                                                                                                                       <  1:1024899/281‑1 (MQ=255)
                                                gCCACACGTTAACCCCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGACTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCTCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACt                                                                                                                                                                                                                                       <  1:505288/278‑1 (MQ=255)
                                                ctccaaCTTTTACCCCTGCTGCCTATACCCAAATTCAACACACTGGCGCGGATATGTTTTCGTCCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACt                                                                                                                                                                                                                                       <  2:827382/274‑1 (MQ=255)
                                                         tAACCCCTGCTGGCTAATCGCAAATTCATTAAGCTGGCGCGGTTATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACACAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAACATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCg                                                                                                                                                                                                                           <  2:302275/281‑1 (MQ=255)
                                                         tAACACCTTCTTGCTAAGCTCAAATTCAGTAGACTTCCGCTAATATTGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACGAAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCg                                                                                                                                                                                                                           <  1:1160764/281‑1 (MQ=255)
                                                          aaCACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCCGTCGCCTTAAAAATCAGTTTCCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTGCTGCCGTCCCCTGAACTTCAATGTTGCGCCCGGCTTCGGTCATACCTACGttaccggtgg                                                                                                                                                                                                                          >  2:788570/1‑273 (MQ=255)
                                                               cTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTctct                                                                                                                                                                                                                     >  1:779914/1‑281 (MQ=255)
                                                                 gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTTTACAGAC‑AAAAAAAAGGCGACTCATAAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCACCAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCt                                                                                                                                                                                                                                                                          >  1:232713/1‑226 (MQ=255)
                                                                 gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGCCGGTCTCTg                                                                                                                                                                                                                    >  1:167161/1‑280 (MQ=255)
                                                                 gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGGCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTccc                                                                                                                                                                                                                                                                            >  2:552540/1‑224 (MQ=255)
                                                                           cgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAA‑GCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAatg                                                                                                                                                                                                                                                               >  2:953289/1‑226 (MQ=255)
                                                                           cgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAA‑GCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAatg                                                                                                                                                                                                                                                               <  1:953289/226‑1 (MQ=255)
                                                                                           tGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTcccc                                                                                                                                                                                                                                                                           >  2:17821/1‑199 (MQ=255)
                                                                                           tGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATTCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAATGTATTCCAGAt                                                                                                                                                                                         >  1:1160588/1‑281 (MQ=255)
                                                                                              cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAACGGATGCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTCCAATGTAGCGCCCTTCTTCGGTCATCCCTACGTTCATGGCGGCCGCGGAGGCAGAGCCTTCAACGTACTCCAGATCg                                                                                                                                                                                       >  2:562687/1‑280 (MQ=255)
                                                                                                       ggTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTACGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCtt                                                                                                                                                                             >  1:924872/1‑281 (MQ=255)
                                                                                                           tCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGcc                                                                                                                                                                         >  2:878888/1‑281 (MQ=255)
                                                                                                             aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGt                                                                                                                                                                                                                                   <  2:1037642/221‑1 (MQ=255)
                                                                                                             aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGt                                                                                                                                                                                                                                   >  1:1037642/1‑221 (MQ=255)
                                                                                                             aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTCTTCCAGATCGCAAACCGCTTCGCCGt                                                                                                                                                                       >  1:553883/1‑281 (MQ=255)
                                                                                                             aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCg                                                                                                                                                                        >  1:663758/1‑280 (MQ=255)
                                                                                                             aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCCTCTGCGTCGCTACAATGGATTAGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAA‑GGGTGCACGGCTCGCCTTCTGCCGTCCCCTGCACTTCATTGATGGCTCCTTCTTTGTTCATCACTACGCTCTATTCGGTCACTCTGGCCGAGCCCTCAACGTTTTCCAGATTGAAAACCgggtcggcgg                                                                                                                                                                       >  2:219163/1‑272 (MQ=255)
                                                                                                             aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAA‑GCGACTCATTAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGACTTCAACGTATTCAAGCTCGCAAACCGCTTCGCCGt                                                                                                                                                                       >  1:1035014/1‑280 (MQ=255)
                                                                                                                  ttCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTcaca                                                                                                                                                                  >  2:417645/1‑281 (MQ=255)
                                                                                                                                 aCTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAAc                                                                                                                                                    >  1:720597/1‑280 (MQ=255)
                                                                                                                                     ttCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCa                                                                                                                                                                                                                                                                       >  1:453053/1‑161 (MQ=255)
                                                                                                                                     ttCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCa                                                                                                                                                                                                                                                                       <  2:453053/161‑1 (MQ=255)
                                                                                                                                      tCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCg                                                                                                                                                >  1:361425/1‑280 (MQ=255)
                                                                                                                                      tCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAc                                                                                                                                                                                                    >  1:1062858/1‑227 (MQ=255)
                                                                                                                                      tCTACAGAC‑AAAAAAAAGGCGACTCATCAG‑CGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCgg                                                                                                                                               >  1:34028/1‑279 (MQ=255)
                                                                                                                                                aaaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTTTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGGCGTTTACAATTCCGACAGAAATTGCGGCTACCATccc                                                                                                                                     >  1:533335/1‑281 (MQ=255)
                                                                                                                                                            aCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGAtt                                                                                                                         >  1:1059251/1‑281 (MQ=255)
                                                                                                                                                                    ggcGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTACGGCAGAGTCTTCAACGTATTCCACATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACGGCGGCTACCATCCCTTCCCTCGGTTTGGTTTTCa                                                                                                                 >  2:949882/3‑281 (MQ=255)
                                                                                                                                                                        ccTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCt                                                                                                              >  1:244956/1‑280 (MQ=255)
                                                                                                                                                                                   aGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTcc                                                                                                   >  1:148950/1‑280 (MQ=255)
                                                                                                                                                                                   aGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTc                                                                                                    >  1:665662/1‑279 (MQ=255)
                                                                                                                                                                                   aGTGTGCCAGCCCCGCCTTCTGGGTCGCTACAATGGATTCGGTTCCCCGCGGGCCAGAGCCAACAAGATGGGTAGCTCTTCAT‑GGGTGAACGGCTCCCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTcca                                                                                                  <  2:148950/281‑1 (MQ=255)
                                                                                                                                                                                     tttGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGcc                                                                                                                                                                                                                                                                                 >  1:989361/1‑104 (MQ=255)
                                                                                                                                                                                     ttggCCAGCGCCGCCTTCATGGAGGGTACAATGGGTTCGATTCCCCTCGGGCCAGAGCCAACAAGATGTGTAGCTCTTCAT‑GGGGGCACGGCTCGCCTGCTGCCTTCCCCTGCACTTCAGTGATGCGCCCGTCTTCGGTGATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTccacc                                                                                                <  2:792262/278‑1 (MQ=255)
                                                                                                                                                                                       tGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCCCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCCCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAGCGAAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGTTACCATCCTGTTCTTCGGATTGGTTTTCAGCTTGCCGTTTTccacaa                                                                                               >  2:499077/1‑278 (MQ=255)
                                                                                                                                                                                             cgccgcCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGCCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCCCTACGTTTATGGCGGTCTCTTCGGCAGAGTCTGCAACGTATGTCAGATCGCAAACCGCTTCGCCGTTTACAATTCCGACAGAAACCGCGGCTAACAACCCTTTCATCGGATTGGGTTTCAGCTTGCCGGTTTCTACTAGCTTCTg                                                                                        >  2:436523/1‑281 (MQ=255)
                                                                                                                                                                                               ccgccTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTTTGTa                                                                                      <  1:878888/281‑1 (MQ=255)
                                                                                                                                                                                               ccgccTTCTGCCGCGCAACCGTGTATTCGAATCCCCTCGGGCCGGAGCCAACAAGATGGTTAGTTCTTAAT‑GGGTGCACGGGTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCGCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATACCAGGTCGCAAACCGCTTCGCCGTTCACGATTCCGACAAAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTa                                                                                      <  2:1035014/281‑1 (MQ=255)
                                                                                                                                                                                               ccgccTCCTGCTTGCCTACAATGGATTCGATGCCCCCCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTa                                                                                      <  2:553883/281‑1 (MQ=255)
                                                                                                                                                                                                         cGTCGCTACAATGTATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTAc                                                                            <  1:73940/281‑1 (MQ=255)
                                                                                                                                                                                                         cGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGt                                                                                                                                                                                                                                              <  1:417955/119‑1 (MQ=255)
                                                                                                                                                                                                         cGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGt                                                                                                                                                                                                                                              >  2:417955/1‑119 (MQ=255)
                                                                                                                                                                                                               tACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAgcgc                                                                      <  2:244956/281‑1 (MQ=255)
                                                                                                                                                                                                                      gattcgattcCCCACTGGCCAGAGCCAACAAGATGAGTATCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTAc                                                                            <  1:492367/268‑1 (MQ=255)
                                                                                                                                                                                                                       cttcgatt‑cCCTCGGGCCAGAGCCAACAAGATGGGTAGCTCTTCAT‑GGGTGAACTGCTCGGCTGCTGCCGTCCCCTGCACTTCAATGATGCCCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAgg                                                              <  2:44282/279‑1 (MQ=255)
                                                                                                                                                                                                                       attcaattcCCCTCGGGCCAGAGCCAACGGGATAAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTAACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCAGCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAgg                                                              <  1:219163/281‑1 (MQ=255)
                                                                                                                                                                                                                        ttcgattcCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATTACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGACGTTTTCCACCCGCTTCTGTAGCGACACCAACAGCGCCAcccctg                                                              >  2:492367/1‑275 (MQ=255)
                                                                                                                                                                                                                                cccTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTC‑GTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGa                                                                                                                                                       <  2:1075143/182‑1 (MQ=255)
                                                                                                                                                                                                                                cccTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTC‑GTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGa                                                                                                                                                       >  1:1075143/1‑182 (MQ=255)
                                                                                                                                                                                                                                  cTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATc                                                   >  1:105319/1‑281 (MQ=255)
                                                                                                                                                                                                                                      ggCCAGGGCCAACAAGATGAGTAGTTTTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGAcg                                               <  2:1160588/281‑1 (MQ=255)
                                                                                                                                                                                                                                       gCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTATGCCGTCCCCTGCACTTCAATGATGCGCACGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAACCCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCCTTCATCGGAGTGGTTTTCAGCTTGACGTTTGCCACCAGCTTCTGTAGCGCATCTACCAGCGCCCCGCCGGCACCCGTACTCGAcgc                                              >  2:875806/1‑281 (MQ=255)
                                                                                                                                                                                                                                                 acaaGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGa                                                 >  2:575524/1‑268 (MQ=255)
                                                                                                                                                                                                                                                 acaaGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGa                                                 <  1:575524/268‑1 (MQ=255)
                                                                                                                                                                                                                                                 acaaGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTATGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATCCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTTCCGTTTTCCACCAGCTTCTGTAGCGCCTCTCCCCGCGCCACGCAGGCAACCGTAATCGACGCGGTCCCCGt                                     >  2:597128/1‑280 (MQ=255)
                                                                                                                                                                                                                                                      aTGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCTGCGCCACGCAGGCACCCGTAATCGACGCGTTACGCGTGcccc                                >  2:214456/1‑278 (MQ=255)
                                                                                                                                                                                                                                                       tGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGccacca                              <  1:417645/281‑1 (MQ=255)
                                                                                                                                                                                                                                                           tAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCAt                             <  1:42091/278‑1 (MQ=255)
                                                                                                                                                                                                                                                           tAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCAt                             >  2:42091/1‑278 (MQ=255)
                                                                                                                                                                                                                                                             gCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCg                                                                                                                                                                                                                           <  1:875055/86‑1 (MQ=255)
                                                                                                                                                                                                                                                             gCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCg                                                                                                                                                                                                                           >  2:875055/1‑86 (MQ=255)
                                                                                                                                                                                                                                                             gCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCa                                                                                 <  1:722652/224‑1 (MQ=255)
                                                                                                                                                                                                                                                             gCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCa                                                                                 >  2:722652/1‑224 (MQ=255)
                                                                                                                                                                                                                                                                   cAT‑GGGTGAACGGCTCGCCTTATGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTAccc                                                                          >  1:222258/1‑224 (MQ=255)
                                                                                                                                                                                                                                                                     agtggTTAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCa                 <  1:499077/278‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTATCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCTGGCAATCATCAGCCTGAAGCACGTc             >  1:593355/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                         gTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCAGCAGCCTGAAGCACGTc             >  1:951091/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                          ttgcaggatcaccTTCTGCCGGCCCCGCCACTTCAACTACGCGCCCGTCTTCGGTCATACCTACTTTCTTGTCGGTCTCCAAGGCAGAGTCTTCAACGTATTCCCAATCCAAAACCGATTCGCCGTTCACAATTCCCCAAGAAACTGCGGCTACCACCCCTTTCATCGGAGTAGTTTTCAGCTTGCCGTTTTACACCAGCTTCTATAGAGCATCTACCAGCGCCACGCAGGCACCCGGAATCGACGCTGTACGCGTGCCACCATCAGCCTGAAGCACGTCg            <  2:1128096/270‑1 (MQ=255)
                                                                                                                                                                                                                                                                          tGAACGTCTCGCCTTCTGCCGTCCCCGGCACTTCAATGAGGCGCCCGTCTTCGGTCCTCACTACGTTGATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGGTCGCAAACCGCTTCGCCGTTCACAGTTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCg            <  2:91023/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                          tGAACGGCTCGCCTTCTGCCATCCCCTGACCTTCAATGATCCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCg            <  1:436523/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aaCGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCCGAGTCTTCAACGTATTCCAGACCGCAAACCGCTTCGCCGCTCACAATCACGCCAGAAACTGCGGCAACCATCCCTTTCATCGGATTGGCTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCCGGCACCCGTCATCAGCGCCGTACGCGTGCCACCATCCGCCAGCAGCCCggtcca          >  2:1154731/1‑276 (MQ=255)
                                                                                                                                                                                                                                                                            aaCGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGGTTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGAGCATCAACCAGCCCCACGCAGGCACCCGTAATCGACGAGGTACCCGTGCAACCATAAGCCTGAAGCACGGCGCa          >  1:360996/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                            aaCGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCCCCATCAGCCTGAAGCCCGTCGCa          >  1:196320/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                            aaCGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCGCa          >  1:91023/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                            aaCGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACCCCGTACGCGTGCCACCATCCGCCTGAAGCCCGCCGCa          >  2:949834/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                            aaCGGCTCGCCCTATGCCGTCCCCTGCACTTCAATGATCCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCCCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATCGGTTTTCATATTGACGTTTTCCCCCAGCTTCTGCAGAGCATCAACCCCCGCTACGCCGCACCCCGTAACCGACCGGGCAGCAGTGCCACCATCGGCCTGACGCACGCCgat          >  2:630545/1‑279 (MQ=255)
                                                                                                                                                                                                                                                                               gtcTCCCCTTCTGCCGTCCCCTGCCCTTCAATGATTCGCCCTTCTTCGGTCATCCATCCGTACATGTCGGTCTCTGTTGCAGATTCTTCAACCTATTCCAGATCGCAAACCGCTTCGCCTTTCACAATTCCGACAGAAACGGCGGTTGCCATCCCTTACAACGGTTTGGTTTTCAGCTGGCCGTTTTCCACCAGCTGCTTTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCGCAGTc       <  2:1154698/279‑1 (MQ=255)
                                                                                                                                                                                                                                                                               ggCTCGCCTTCTGCCTTCCCCTGCACTTCACTGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCGCAGTc       <  1:140895/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                               ggCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCGCAGTc       <  1:214456/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                                gcctgCCGTCTGCCCGCCCCTAGACTTGAAACATGCGCCCGTCTTCGGGCATCACGACATTCATGTCGGTCTCTGCGACATAGTCTTCAACGTATTCCAGATCGCCAGCCGCTTCGCCGTTCACAATTCCGACTGAAACTGCGGCTACCTACCCTTTCATCGGATTGGTTTTCAGCTTGCCATTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCGCAGTc       <  2:533335/276‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 cTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCAACCATCAGCCTGAAGCACGTCGCAGTCCa     >  1:718828/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                                   cGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCCCCACGCAGGCACCCGTAATCGACGCGGTACGCGGGCCCCCATCACCCTGAAGCACGCCGCAGTCCAGc   >  2:1044115/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                                     ccTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAAGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCGCAGTCCAGCg  <  2:779914/280‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      cTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCAt                             >  1:970548/1‑252 (MQ=255)
                                                                                                                                                                                                                                                                                      cTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCAt                             <  2:970548/252‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                   
GGCGTTGAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAT‑GGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCGCAGTCCAGCG  >  NC_000913/3815658‑3816212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A