Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A23 F184 I0 R1 36 86.6 1465572 97.6% 1430398 267.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,296,190 A→G 22.6% intergenic (+396/+246) gltP → / ← yjcO glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,296,1900AG22.6% 38.0 / 13.1 30intergenic (+396/+246)gltP/yjcOglutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein
Reads supporting (aligned to +/- strand):  ref base A (15/8);  new base G (5/2);  total (20/10)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.87e-01

TTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑TGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑‑CCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCC  >  NC_000913/4295904‑4296471
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                             
ttttGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTaa                                                                                                                                                                                                                                                                                              <  1:131066/288‑1 (MQ=37)
ttttGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAAc                                                                                                                                                                                                                                                                                             <  1:110185/289‑1 (MQ=37)
           ggATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAATGCGTTTACGCCGCCTCCGACATCAAAGCCTGCTGCGACGCTTACCGCGTCTTATCa                                                                                                                                                                                                                                                                                  >  2:27301/1‑289 (MQ=255)
              tAAGGCGTTTAGGCCGCGTCCGACACCAACGCCTGAGGGGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGc                                                                                                                                                                                                                                                                               <  2:543485/289‑1 (MQ=255)
                tggCGTTGATGGACCATCCGAAATCAACGCCGGATGCTACGGATAACGCGGCTTATCAGGCCTACGCCGGGCAGGGCAATAGCCTGATGTCGCGTGATTTTGTAGGTAGGATAAGGCTTTTAGGCCGCACCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATCGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGc                                                                                                                                                                                                                                                                               <  2:609252/286‑1 (MQ=11)
                       tATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAAcg                                                                                                                                                                                                                                                                                            >  1:346768/1‑267 (MQ=37)
                              cATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGCGTATTACCAGGCCTACGCCCGACAgccg                                                                                                                                                                                                                                                               >  2:325279/1‑287 (MQ=255)
                                                 gtgtgacgtgtcaCGGGTCTTATCCGGCGTAAGCCCGACAGCGGAATTGCCATATTTGGGGTGATTATGTAGGGTGGATAAGGCGTTTACGCCGCATCCGCCATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGt                                                                                                                                                                                                                                            <  2:378027/276‑1 (MQ=11)
                                                                      aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGc                                                                                                                                                                                                                                                                               <  2:135638/233‑1 (MQ=33)
                                                                              tACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTacg                                                                                                                                                                                                               >  1:137181/1‑286 (MQ=17)
                                                                                cGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGa                                                                                                                                                                                                                                                                     >  1:135638/1‑233 (MQ=33)
                                                                                   cagaaggcggAATTGCCTGATTGTGCGTGGTTTGGTCGGTCGGATAAGGCGTTTACGCCGCATCCGCCATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑CGCCGCa                                                                                                                                                                                                         <  2:621018/282‑1 (MQ=11)
                                                                                     gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACTGCGCAATAGC‑CTGCCTTCGCGTGATTTTGTAGTTCCGATAAGGCGATTA‑CGCCGCATc                                                                                                                                                                                                       >  2:427021/1‑288 (MQ=255)
                                                                                          cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCCACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑CGCCGCATCCGACa                                                                                                                                                                                                  >  2:204092/1‑288 (MQ=25)
                                                                                          cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑CGCCGCATCCGACa                                                                                                                                                                                                  >  1:252673/1‑288 (MQ=25)
                                                                                                    tGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATACGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTCATGCCGCATACGACATCAACGCCTGATGCGCCGCTTACCGCTTCTTATCAGGCCTATACCAGCCAGCGCACTAGCACTCA‑TTCGCGTGCTTTTGTATGTCGGATAAGGCGTTTA‑CGACGTATCCGAAAtgatgcccac                                                                                                                                                                                        >  2:182836/1‑279 (MQ=11)
                                                                                                     gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGTCGTTTA‑CGACGCATTCCACCTCCATCCCTGAt                                                                                                                                                                                      >  2:154035/1‑289 (MQ=255)
                                                                                                     gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑CGCCGCATCCGACATCAATGCCTGAt                                                                                                                                                                                      >  1:406825/1‑289 (MQ=21)
                                                                                                      aTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGAGTCTTATCAGGCCTACGCCAGACCGCGGAATACC‑CTGATTTCGGGTGATCTTGTAGGTCGGATAATGTGTTTACTCCCGCTTCCAACAT‑AATGCCTGact                                                                                                                                                                                     >  2:454840/1‑287 (MQ=11)
                                                                                                           gCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑CGCCGCATCCGACCTCAATGCCTGATGCGAc                                                                                                                                                                                 >  2:347576/1‑288 (MQ=21)
                                                                                                                    tGTAGTACGGATAATGCGTTTACGCCGCATCAGACATCAACGCCTGGTGCGACGCTTGCCGCGTCTTAGCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑CGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgcg                                                                                                                                                                       <  1:410520/289‑1 (MQ=11)
                                                                                                                      tAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTacg                                                                                                                                                                                                               >  1:182337/1‑246 (MQ=18)
                                                                                                                      tAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTacg                                                                                                                                                                                                               <  2:182337/248‑3 (MQ=18)
                                                                                                                                                                                     ttATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTCTAGGTCGGATAAGGCGTTTA‑CGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCTGGCCTACGCCCGAAAGGACCATCGCCTGATTGCGTGTGACTTTTTAGGTCGGATacg                                                                                                      >  2:492238/1‑287 (MQ=11)
                                                                                                                                                                                                                                                               gCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑TGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTg                            >  2:158928/1‑289 (MQ=12)
                                                                                                                                                                                                                                                                          cAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑TGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTc                 >  2:16389/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                  gATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑TGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAActct          >  1:50821/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                   aTGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑TGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGATGCTTGCCGCGTCTTTTCAGGCCTATCTTAAACGGTGGCTACTTTTTCAAACTCtt         >  2:604517/1‑288 (MQ=11)
                                                                                                                                                                                                                                                                                    tGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑TGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGTATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTc        >  1:712466/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                         cGCTTGCCGCGTCTTGTCAGGCCTACGCCAGACAGCGCAAGAGG‑CTGATTTAGCGTGAGTTTGTAGGTCGGATAAGGCGTTTA‑TGCCGCATCCGACATCAACGCCTTATGCGACGCTTAAAGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCACGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACAcc   <  1:615906/288‑1 (MQ=14)
                                                                                                                                                                                                                                                                                         cGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑TGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACAccc  <  1:16389/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                             
TTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGC‑CTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑TGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑‑CCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCC  >  NC_000913/4295904‑4296471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A