Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A24 F2 I0 R1
|
35 |
39.7 |
777878 |
96.9% |
753763 |
248.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| MC JC |
NC_000913 |
4,001,645 |
Δ5 bp |
100% |
coding (220‑224/951 nt) |
corA → |
magnesium/nickel/cobalt transporter |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
4001645 |
4001649 |
5 |
58 [0] |
[0] 58 |
corA |
magnesium/nickel/cobalt transporter |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 4001644 | 0 (0.000) | 58 (1.520) |
42/476 |
NT |
100% |
coding (219/951 nt) |
corA |
magnesium/nickel/cobalt transporter |
| ? | NC_000913 |
4001650 = |
0 (0.000) | coding (225/951 nt) |
corA |
magnesium/nickel/cobalt transporter |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTTGTTTCTGTGTGCCCACCGAACTGTCCGATATTTTAAGCATTGGGAGTCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAGCGACCTGGAGCAGTTGAGCCGGGTGATTATGGAAGGGCATCAGGGCGATGAGTACGACG > NC_000913/4001368‑4001942
|
ATTTGTTTCTGTGTGCCCACCGAACTGTCCGATATTTTAAGCATTGGGAGTCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAAGCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATG > M01186:120:000000000‑A992N:1:2108:15464:11033/1‑300 (MQ=60)
TTGTGTGCCCACCGAACTGTCCGATATTTTAAGCATTGGGAGTCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATC < M01186:120:000000000‑A992N:1:2105:12344:8217/301‑1 (MQ=60)
CCACCGAACTGTCCGATATTTTAAGCATTGGGAGTCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTC < M01186:120:000000000‑A992N:1:2106:18473:14860/271‑1 (MQ=60)
AACTGACCGATATATTAAGCATTTGGAGGCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCAGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACTACGAGCGACTGCGCGTACAAGCTGAACTTGGCCAGAGCCTGGCAACCCGCACGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCC < M01186:120:000000000‑A992N:1:2112:28871:12396/301‑1 (MQ=60)
GTCCGATATTTTAAGCATTGGGAGTCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGAT < M01186:120:000000000‑A992N:1:2102:28066:15134/282‑1 (MQ=60)
CCGATATTTTAAGCATTGGGAGTCCCGGTCATGCTGGGCGCAATTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGT < M01186:120:000000000‑A992N:1:1106:23963:12176/300‑1 (MQ=60)
ATTTTAAGCATTGGGAGTCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGCTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CCCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCCTT > M01186:120:000000000‑A992N:1:2104:24861:10733/1‑301 (MQ=60)
ATTTTAAGCATTGGGAGTCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCACGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCAGGTAACTCCACTGTGGCATT > M01186:120:000000000‑A992N:1:1117:14135:7268/1‑301 (MQ=60)
ATTTTAAGCATTGGGAGTCACGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCAAGAGCCTGGCAACCCGCCCGGCACTGGAAGACATTGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGACTCCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTCACTCCACGTTGGCATT > M01186:120:000000000‑A992N:1:1111:21234:20419/1‑301 (MQ=60)
GTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGT > M01186:120:000000000‑A992N:1:2106:20603:13374/1‑298 (MQ=60)
GTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCACTTGTAAATGTAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGAACGTTTCTTTGAAGACGACGACGGCCTGAAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGTGGAAGATCACGCCGGGAACTCCctgtctcttctcaccatctccgaccccacgcga > M01186:120:000000000‑A992N:1:1106:21219:25323/1‑268 (MQ=60)
TCATGCTGAGCGCATTTCAACTGGAAATGAACCGCCTGACCCGGCTGGAAGTCGAAGAGTCACACCCCCTTGTAAATGCATTATGGATTCATCTTGTCGGACCGGACGACGACGAGCGACGGCGCGTACAATCTGAACTTGGCCAGGGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAACATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGT < M01186:120:000000000‑A992N:1:2107:11467:13010/301‑1 (MQ=60)
GCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTA > M01186:120:000000000‑A992N:1:1105:13257:3565/1‑300 (MQ=60)
TGGGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGGAACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGAGGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTC < M01186:120:000000000‑A992N:1:1103:23183:9651/301‑1 (MQ=60)
ggcaCATTTCAACTGGAAAATAACCTACTCACCCTGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATGTTGTCGAACCGTACGACGACTAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGTCATCTGAGCTTCGGCACGTTTCTTTGAATACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGTCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCT < M01186:120:000000000‑A992N:1:2116:27238:19655/296‑1 (MQ=60)
CATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTCTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCattttcctctgagtg > M01186:120:000000000‑A992N:1:1109:20869:5438/1‑286 (MQ=60)
CATTTCAACTGGAAAATAACCGACTGACCCGGATGGAGGACGAAGAGTCCAAACCCCTTGTAACTGCAGTATGGATTAATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTAGGCCCGAGCCTGGAAACCCGCCCGGAACTGGAAGAAATCGAAGCATCGGAGCGTTTCCTTGAAGAAGACGACGGCCTGCAT‑‑‑‑‑CAACTTCTTCTTCTTTGATGATGCGGAAGAaaaagacggtcacaccagcgtggcacttaccatccggtgtggtcgtctgtttacgatgcgtg > M01186:120:000000000‑A992N:1:2118:5539:5042/1‑239 (MQ=60)
TAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGCTCACGCCGGTAAATCCACTGCGGCATTTA‑CCATCCGTGATGGTCGGCTGTTTACTCTGCGTTAGCGTGAACTGCCCG > M01186:120:000000000‑A992N:1:2119:19508:20339/1‑300 (MQ=60)
CTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCG < M01186:120:000000000‑A992N:1:2106:16283:7350/300‑1 (MQ=60)
AAGTCGAAGAGTCACAACCCATTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACCGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATG < M01186:120:000000000‑A992N:1:2110:15726:9984/300‑1 (MQ=60)
GTCGAAGAGTCACACCCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGACTGGCACCCCGCCCGGGACTGGAAGACATCGAAGCATCGGCACGTTGATTTGAAGACGACGCCGGCCTGGAT‑‑‑‑‑CTACTTCTTCTTCTTTGACGATCAGGCAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTCACGGTCGTCTGTTTACCCTGCGTCACCGTTAACTGCCCGCTTTTGGTTTGTATCGTATGCGT > M01186:120:000000000‑A992N:1:1118:26151:21251/1‑301 (MQ=60)
GTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTC < M01186:120:000000000‑A992N:1:2105:26290:9996/181‑1 (MQ=60)
ggaggcctcgtgggctcggagatgtgtataagggcaaggagCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCG < M01186:120:000000000‑A992N:1:1102:27978:15022/258‑1 (MQ=60)
AGAGTCACAACCCTATGTAAATGCAGTATGGATGGATCTTATCAAACCGGACGACGACGACCGACTGCGCGTACAATCTGAACTTGGCCAGGGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCC < M01186:120:000000000‑A992N:1:1109:9100:22433/299‑1 (MQ=60)
GTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG > M01186:120:000000000‑A992N:1:1103:13398:12086/1‑301 (MQ=60)
GTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCACGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG > M01186:120:000000000‑A992N:1:2103:14574:5144/1‑301 (MQ=60)
ATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACG > M01186:120:000000000‑A992N:1:2117:19497:18069/1‑301 (MQ=60)
ATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTAGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGAC > M01186:120:000000000‑A992N:1:2110:12487:18256/1‑300 (MQ=60)
CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCAGCCCGGAACTGGAAGACATCGAAGCATCAGCACGGTTCTTTGAACACCAAGACGGCCTGC‑‑‑‑‑CTCTCCTTATTATTCTTTGAAGATGCGGAAGAACACGC > M01186:120:000000000‑A992N:1:2112:11335:10984/1‑179 (MQ=60)
TTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CCCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTtgtctcttatacccatctccgagcccacgagacccatctacaccttgtctgacgtcttctgatttaaacacaaaa > M01186:120:000000000‑A992N:1:1106:20693:5217/1‑226 (MQ=60)
GTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATA‑‑‑‑‑TCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTCAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCTTCGCCAGTTCATGGTAGACGGTAA > M01186:120:000000000‑A992N:1:2113:22862:7121/1‑300 (MQ=60)
GTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGATGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTATTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTCGCCAGTCGATGGTAGACGGTAA > M01186:120:000000000‑A992N:1:1118:28333:11048/1‑300 (MQ=60)
TATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATAACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAA < M01186:120:000000000‑A992N:1:1109:17390:12356/299‑1 (MQ=60)
GATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAG > M01186:120:000000000‑A992N:1:2115:12403:9213/1‑301 (MQ=60)
GATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGCCGATGGTAGACGGTAACGCCTACGGG > M01186:120:000000000‑A992N:1:1102:10153:4803/1‑301 (MQ=60)
GATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTAC > M01186:120:000000000‑A992N:1:1114:19626:17925/1‑216 (MQ=60)
TTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTC > M01186:120:000000000‑A992N:1:2101:10924:11663/1‑214 (MQ=60)
CAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGC‑‑‑‑‑CTCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGTTCGACGGTAACGC > M01186:120:000000000‑A992N:1:1103:18652:6297/1‑255 (MQ=60)
ATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCCATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGG > M01186:120:000000000‑A992N:1:1104:21678:20265/1‑301 (MQ=60)
ATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCAGCTTTTCGTCTGTATCGTATGCGTGCCCGTCGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGACCTGTTCGAAACCAAAATCGACCAGTGGG > M01186:120:000000000‑A992N:1:2101:13046:21182/1‑300 (MQ=60)
CTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTGCTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATC < M01186:120:000000000‑A992N:1:1115:21544:7040/301‑1 (MQ=60)
ttataagtgactgCTGGAAGACATCGAATCATTGGTAAGTTTCTGTGAGGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTGCTTGTTTGAAGATTCGGAAGGTCACGCCGGTAACTCCACTGTGGCAGTTA‑CCATCCGTTATTGTCGTCTGTTTACTCTGCGTTAGCGTGAACTGCCCGCTTGTCGGCTTTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAGCGCCTACGAGTTGCTGCTGGATCTGTTCTAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAG < M01186:120:000000000‑A992N:1:1114:23917:5015/288‑1 (MQ=60)
AACCCGACCGGAACTTGAAGACATCGAAGAATCGGCACGTTTCTTTGAAGACCGCGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGGGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGCTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAG < M01186:120:000000000‑A992N:1:2111:8277:10659/301‑1 (MQ=60)
cttgGAAGCATCGGCAAGTTGCTTCGGAGACGACGACCGCCTGCGT‑‑‑‑‑CTCCTTCTTCGTCTTTGAAGATGCCGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTTGTCTGTTTACTGTGCGTTAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCTATGGGAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGACCAGTTGGCAGATGAAATTGAAAATATCTATAGCGACCTGGAGCAGTTGAGCCG < M01186:120:000000000‑A992N:1:2115:13555:17707/297‑1 (MQ=60)
CATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCCGGATCTGTCCGAAACCAAAATCGAACAGTTGGCAGCTGAAATTGAAACTATCTATAG > M01186:120:000000000‑A992N:1:2102:24747:20110/1‑280 (MQ=60)
GAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAAAAGTTGGCAGATGAAATTGAAAATATCTATAGCGACCTGGAGCAGTTGAGCCGGGTGATTATGGAAGGGAATCAGGG > M01186:120:000000000‑A992N:1:2101:23816:17022/1‑300 (MQ=60)
CCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAGCGACCTGGAGCAGTTGAGCCGGGTGATTATGGAAGGGCATCAGGGCGATGAGTACGACG < M01186:120:000000000‑A992N:1:1101:21277:12108/301‑1 (MQ=60)
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ATTTGTTTCTGTGTGCCCACCGAACTGTCCGATATTTTAAGCATTGGGAGTCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTA‑CCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAGCGACCTGGAGCAGTTGAGCCGGGTGATTATGGAAGGGCATCAGGGCGATGAGTACGACG > NC_000913/4001368‑4001942
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
