Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F9 I0 R1
|
58 |
62.8 |
1514203 |
84.7% |
1282529 |
220.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,132,787 |
A→C |
100% |
I204S (ATC→AGC) |
wcaA ← |
putative glycosyl transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,132,787 | 0 | A | C | 100.0%
| 220.4
/ ‑6.7
| 78 | I204S (ATC→AGC) | wcaA | putative glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (33/42); minor base T (0/2); total (34/44) |
| Rejected as polymorphism: E-value score below prediction cutoff. |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
CCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACT > NC_000913/2132566‑2133011
|
cccGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑g > 1:595212/1‑227 (MQ=255)
ccaaactccATCAGCTAGTATTTTGTCGTTTCGCCCCGAACGCGGGGTCCGCAAAGTGGGCCAGTTTATGCGTTTATTGCGGATCTGGTAGAGGGTAAACATCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTAACCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTc < 2:326569/222‑1 (MQ=255)
ccGAATACCATCAGTCAGTCGTTTGGCTTTCCGCGCCGATGGAGGCGTCAGCAAAGGGCGCCAGGTCATTCGGTTATTGCGGATCTGGTAGGGGGTAAACAGCCGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTc < 2:225037/229‑1 (MQ=255)
ccGAAACCCACCCGCCAGGCGTTTCCCGTTACGCACCGACAGCGGGGTCAGGAAAGGGTGCCAGGTCATACGTTTATTGCGGATCTGGTAGATGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTc < 2:340519/229‑1 (MQ=255)
gAATTCCATCAGCCAGACTTTTGCCGTTTCGTACCGACAGCAGCGTCAGCAATGTGCGCCAGGTCATTCGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc < 1:579628/229‑1 (MQ=255)
gAATTCCATCAGCCAGACGTGTGCCGTTACTCACCGACAGCAGAGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc < 1:70854/229‑1 (MQ=255)
gAATACCATCAGCCAGACGTTTGCCGTTACGCCCCGACAGCAGCGTCAGGAAAGTGCGCCAGGTCATACGTTTATTGGGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc < 1:583380/229‑1 (MQ=255)
aaaTACCATCAGCCGGTCGTTTTCCGTTACGCACCGGCAGCTGGGTCAGCAAAGTGCCCGAGGTCATTCGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc < 1:340790/228‑1 (MQ=255)
acttacaccAGGCTTTTGCCGGTTCGCACCGACGGCGGCGTGAGCAAAGTGCGTCGTGTCATGCGGTTATTGGGGATCTGGTAGAGGGTACACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTATTTGGGCTTGCGGTAAAAGTGGAATTTCCCGGAGAATTTTTTCGGTTACGAGGTGATCTCCATTTTACCGTGATTGATATGCAGGCTCT‑GCGTCGCCtctt < 2:521498/222‑1 (MQ=255)
cATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGAAGGCTCT‑GCGTCGTCtctt > 1:521498/1‑228 (MQ=255)
tCAGCCAGACTTTGGCCGTTGCGCACCGAAAGGAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGGGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCCCCGTGATTGATATGCAGGCTCT‑GCGTc < 2:700894/219‑1 (MQ=255)
tCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGCTCTGGTAGAGGGAAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGCGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCT‑GCGTc > 1:700895/1‑219 (MQ=255)
tCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTCCATTTCACCGTGATTGATATTCAGGCTCT‑GAGTCGGCTCTTCTa > 2:736092/1‑229 (MQ=255)
aCGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGCCGAGGTGATCTGCATTTCACCGTGATTGATTTCCAGGCTTT‑GCGTCGCCTCTTCTACTTTCCAc > 1:750853/1‑229 (MQ=255)
aCGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGGGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GGGTCGCGTCTTCTACTTTCCa > 1:729266/1‑228 (MQ=255)
cGTTTGCCGTTTCGCACCGACAGCAGCGTCAGCAAAGTGCGACAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACg < 1:437614/229‑1 (MQ=255)
gCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGCATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGTGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTc > 1:246311/1‑228 (MQ=255)
gtttcgctgcGACAGCGGGGTTAGGAAAGTGGGCCGGGTTATCGGTTTAGTGCGGATTTGGTAGAGGGTAAAAGGCTGATA‑TTTTGTGCTGGCGCGGTCGAATTTGTTTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCg < 2:724268/220‑1 (MQ=255)
ttACGCACCGACAGCAGTGTCAGCAAAGGGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑GTTTTTGCTAGCGCGGTCGAATTTGGCTTTGTGCTTGCGGTAAAAGTGGAAGTACCAGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCg < 1:212677/228‑1 (MQ=255)
aCGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGGAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGTTGACGAGGTGATTTGCATTTCACCGTGATTGATATGCAGG‑TCTGGCGCGGCCTCTTCTACTTTCCCCCGTTCTCCGTa > 2:501885/1‑228 (MQ=255)
gagcagaGGCAGCAAAGTGCGCCAGGTCTTACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTTATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGATAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTccaccac < 1:594566/227‑1 (MQ=255)
aagggggcccagTCATACGTTTATTGCGGCTCTGGTAGAGGGTAAAGAGCTGATA‑TTTTTTGCTGGCTCGGTCAAATTTGTCGTTGTGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGaa < 2:729265/215‑1 (MQ=255)
cAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGAAGGCTTT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCAACCCCCATCCGCAGGAAGagtccgta > 1:145113/1‑220 (MQ=255)
cAGGGCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCATGCGGGAAAAGTGGAAGTACCCGGGGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTTGTATGCAGGCTCT‑GCGTCGCCTCGTCTACTTTCCACGGGTCGCCGTAGTCACCCGGCATACGCCGGAAGAA‑Gtagga > 2:107389/1‑223 (MQ=255)
gtctgtcGTTTATTGCGGATCTGGTAGAGGGTAAACAGGTGATT‑TTTTTTGCTGGCCCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCt < 1:371568/223‑1 (MQ=255)
tACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCTCT‑GCGTCGCCCCTTCTACTTTCCCCGGTTCGCCGTCCCCCCCCACCATCC‑CCGGGAGATCGTCGTAATcccttg > 2:145965/1‑224 (MQ=255)
tACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGAAAAAT‑GTCGTAATCCtttg > 2:148457/1‑228 (MQ=255)
tACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTGGTCTTTTTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTCCTTGATAATCAGGCTCT‑GCGGCGCCTCTTCTACTTTCCACGTTTCGCCGTACACCACAACCACCCCCAGGAAGAT‑GTCGTAATCCTCTGc > 2:178566/1‑229 (MQ=255)
tATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTTGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCCCGGTTCGCGGTACTCCACCACCATCCGCCGGACGCT‑GTCGTAATCCTGGGCCGCttt > 2:159170/1‑229 (MQ=255)
ttgtgggATTTGGGGGAGGGTAAACAGGTGATA‑TTTTTTGCTGGCGGGGGCGAATTTGTCTTTGGGGTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCttt < 2:246311/223‑1 (MQ=255)
aTTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCCGTAAGAT‑TGCGTAATCCtgtcactcttt > 1:635728/1‑220 (MQ=255)
aTTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCCGGAAGAT‑GTCGTAATCCTTTGCCGCttt > 1:196241/1‑228 (MQ=255)
cGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGtt > 1:487327/1‑229 (MQ=255)
cTGGTTGGGGGTAAACAGCGGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGa < 2:498706/197‑1 (MQ=255)
cTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAgc > 1:498706/1‑196 (MQ=255)
gttttgagGGTATAGAGGTGATT‑TTTTTGGGTGTGGCGGGTGAATTTGTTTTTGTGCTTGGGGGAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCTCCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTAt < 2:294614/224‑1 (MQ=255)
ggTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaac > 1:443908/1‑228 (MQ=255)
gTAAACAGGTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGATTGCGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaa < 1:487519/228‑1 (MQ=255)
taaatgggtGATA‑TCTTGTTCTGGCGGGGTCGAATTTGTCTTTGTGCTTGCGGTTAAAGTGGAAGTACGCGGAGAAGTGTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTTGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca < 1:315697/221‑1 (MQ=255)
aaCAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCCCTTTTCCTTTCCCCGGTTCGCCGTACTCAACCCCCACCCCCAGAGAATT‑GTCGCAACCCGTTGCCCCTCTCAATCCGGATTCCAACAAaaac > 2:70853/1‑228 (MQ=255)
aaCAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGGAAAAGTGGAAGGACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACTATCCGCAGGAAGAT‑GTCGGAATCCTGTGCCGCTTCCATTTCGGTATCGcacaacacc > 2:175918/1‑224 (MQ=255)
cTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAAAACCCttt > 1:333090/1‑228 (MQ=255)
tGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGCT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATGGAAAAAAACCTCTTTg > 2:521149/1‑228 (MQ=255)
ctgtttttttttGCTGGCGGGGTCGAATTTGTTTTTGTGCTTGGGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTTATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCttt < 2:750852/222‑1 (MQ=255)
ttttttGGTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGGGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGc < 1:711607/229‑1 (MQ=255)
ggtGGCGGGGTGGATTTGGTTTTTGGTGTTTCGGTAAAAGTGGAAGTTCCCGGGGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGcc < 2:117411/227‑1 (MQ=255)
ggtGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGcc < 1:148457/227‑1 (MQ=255)
cTGTCGCGGTGGATTTTGTCGTTGTGGTTGCGTTAATAGTGTAAGTACCCTGAGAAGTTTTTCGGTGACGAGGTGATCTGCCTTTCCCCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGccc < 2:145113/229‑1 (MQ=255)
cTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTGCGCCGTACTCCACCACCATCCGCAGGAGGAT‑GTCGTAATCCTGTGCCGCTTTGAGTTCGGAATCGAACAAACACACTTTGAAACCCCATGcc > 1:660337/1‑228 (MQ=255)
tGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCa > 1:546014/1‑130 (MQ=255)
tGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCa < 2:546014/130‑1 (MQ=255)
gcgcGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca < 2:583745/206‑1 (MQ=255)
gcgcGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca > 1:583746/1‑206 (MQ=255)
ttttTCTTTGTTGTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTg < 1:521149/228‑1 (MQ=255)
ttGTCGTTGTGCTTGGGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGATGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTgg < 1:469285/228‑1 (MQ=255)
tttttttGTGTTTGCGGTAAAAGGGGAAGTACCCGGAGAATTTTGTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt < 2:595211/225‑1 (MQ=255)
gttcttGTTCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCGCCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGGTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAAGCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt < 1:736093/224‑1 (MQ=255)
gTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt < 1:152226/228‑1 (MQ=255)
gTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTGTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt < 1:427261/228‑1 (MQ=255)
cTTTGTGCTTGCGGTAAAAGTGGATGTACCCGGAGAATTTTTTCGGTGACGGGGTGATCTTCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGc < 1:510526/228‑1 (MQ=255)
gctgTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACGCTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTg < 1:175918/226‑1 (MQ=255)
taacgttgAAGTTCCCTGGGAATTTTGTGGGGGACGGTGTGATCTTCTTTTCACCGTGTTTGATCTGGAGGTTTT‑GCTTCGCCTCTTCGACGTTCCACGGTTCGCAGTACTCCACCACCATCCGGAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCGTTGAAACGCCATGCCCAGGTAAAGATCTGGTTGCCAATGATATTGCGttt < 2:635727/222‑1 (MQ=255)
aaaaGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCAACATCCGCAGGACGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGACCAAACACTCTTTGAAACGCCATGCCCAGGTAAAAACACGGTTGCCAAAGAAATTGCGttt > 2:93004/1‑229 (MQ=255)
ggAAGTACCCGGAGAATTTTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGaa < 1:501885/229‑1 (MQ=255)
gTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCCTTTCCCCGTTATTGGTATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAgg < 1:504764/229‑1 (MQ=255)
tgcccGGAAGATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAggc < 1:486715/227‑1 (MQ=255)
cccGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAACGACCTGGTTCCCAATGACATTGCGTTTCTAGAACAggcgg > 1:727312/1‑229 (MQ=255)
ttttCGGTTACGAGGTGATCTGCATTTCCCCGTGATTGATAGGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACgg < 1:145965/229‑1 (MQ=255)
tGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATTCCCAGGTAAAGACCTgg > 1:500272/1‑178 (MQ=255)
tGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGAtt < 1:380060/227‑1 (MQ=255)
tttGCTTTTCCCCGTGTTTGCTCTCCGGGCTCT‑CCGTGCCCTCTTCTCCCTTCCACGGTTCGCCGTACTCCACCCCCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCgg < 2:333090/227‑1 (MQ=255)
cACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACAATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGAAAAGACCTGGATGCCAATGTTATTGGGTTTGGAGAACAGACGGCGTGCATACGGCGAGTTGGGAAACAGCTGCAAGCATGc > 1:268389/1‑229 (MQ=255)
cGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCTCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACTAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTCCCAATGATATTGCGTTTGTAGTACAGTCGGCGTGACTACGTCGATTTGGGATACAGCGGCCAGCTTGACgg > 1:225887/1‑229 (MQ=255)
tgattgatATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAAAAGGCGGCGTGAAAACGGCGCATTGGGATCCAGCGGCAAGCTTGCCgg > 1:223483/1‑227 (MQ=255)
tgattgatATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGACGACCAGGCGGCGGGAATACGGCCAATTTGGTAACACCGTCAAGCTTGGCGGtt > 2:233418/1‑229 (MQ=255)
attgatATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGACGCT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGCGGGGAATACGGGGGTTTGGGATACAGCGGCAAGATTTCCgggggg > 2:502524/1‑225 (MQ=255)
gatATGCCGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGaa < 1:233418/229‑1 (MQ=255)
gaGGTTCT‑GCGTCCCGTCTTCTTACTGCCAGGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCGGGGCCGCTTTCAGTTCGGTATCGAACAAACTCTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACt < 2:220310/228‑1 (MQ=255)
|
CCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACT > NC_000913/2132566‑2133011
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCAGATCTTCCAGCATCTTTAGCGCCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACTTCGCCCTGGCAAACGTAGT > NC_000913/2132539‑2133030
|
CGCAGATCTTCCAGCATCTTTAGCGCCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTAACCGGGATTGTTATGCAGGCT > M01186:129:000000000‑A5M8V:1:1107:9518:13339/1‑250 (MQ=60)
TCTTTAGCGCCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTT > M01186:129:000000000‑A5M8V:1:2107:12991:16185/1‑249 (MQ=60)
TTAGCGCCCCCGAATTCCATCAGCCAGACGTGTGCCGTTACTCACCGACAGCAGAGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTT < M01186:129:000000000‑A5M8V:1:1102:15031:24405/251‑1 (MQ=60)
TTAGCGCCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCCCCGACAGCAGCGTCAGGAAAGTGCGCCAGGTCATACGTTTATTGGGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTT < M01186:129:000000000‑A5M8V:1:2107:22413:8537/251‑1 (MQ=60)
TTAGCCCCCCCGAATTCCATCAGCCAGACTTTTGCCGTTTCGTACCGACAGCAGCGTCAGCAATGTGCGCCAGGTCATTCGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTT < M01186:129:000000000‑A5M8V:1:2107:21720:5246/251‑1 (MQ=60)
TTACCGACCCCAAATACCATCAGCCGGTCGTTTTCCGTTACGCACCGGCAGCTGGGTCAGCAAAGTGCCCGAGGTCATTCGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTG < M01186:129:000000000‑A5M8V:1:1112:28416:18401/251‑1 (MQ=60)
CCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGAAGGCTCTGCGTCGTCTCTTCTACTTTCCCC > M01186:129:000000000‑A5M8V:1:2105:6011:13323/1‑250 (MQ=60)
CCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGCTCTGGTAGAGGGAAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGCGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCTGCGTCGCCTCTTCTAC > M01186:129:000000000‑A5M8V:1:2111:6966:11731/1‑241 (MQ=60)
CCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGCCGAGGTGATCTGCATTTCACCGTGATTGATTTCCAGGCTTTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCtga > M01186:129:000000000‑A5M8V:1:2114:19355:14223/1‑248 (MQ=60)
CCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGGGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGGGTCGCGTCTTCTACTTTCCACGGTTGGCCGT > M01186:129:000000000‑A5M8V:1:2112:18489:21046/1‑250 (MQ=60)
CATCAGCCAGACGTTTGCCGTTTCGCACCGACAGCAGCGTCAGCAAAGTGCGACAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTAC < M01186:129:000000000‑A5M8V:1:2103:9224:6622/251‑1 (MQ=60)
GCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGCATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGTGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCttcatccc > M01186:129:000000000‑A5M8V:1:1108:19559:8251/1‑242 (MQ=60)
GACGGTTGACGTTACGCACCGACAGCAGTGTCAGCAAAGGGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑GTTTTTGCTAGCGCGGTCGAATTTGGCTTTGTGCTTGCGGTAAAAGTGGAAGTACCAGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCAC < M01186:129:000000000‑A5M8V:1:1106:19298:27444/250‑1 (MQ=60)
taccattacgcacccacagcctggttagcagaggtcgccagtgcagactgttattggcgatctggtaagacgttaaccggctATA‑TTTTGTGCTGGCGCGGTCGAATTTGTCTTTGTGTTTGCGGGTAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACAATCCGC < M01186:129:000000000‑A5M8V:1:1102:15096:19885/169‑1 (MQ=60)
ttacgcacggcgagcagaggCAGCAAAGTGCGCCAGGTCTTACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTTATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGATAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGA < M01186:129:000000000‑A5M8V:1:2107:24292:15768/230‑1 (MQ=60)
GCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGAAGGCTTTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCAACCCCCATCCGCAGGAAGAgtccgtaatcctggcccg > M01186:129:000000000‑A5M8V:1:1104:15912:28284/1‑231 (MQ=60)
AAGTGCGCCAGGTCTGTCGTTTATTGCGGATCTGGTAGAGGGTAAACAGGTGATT‑TTTTTTGCTGGCCCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTC < M01186:129:000000000‑A5M8V:1:2101:21744:10708/251‑1 (MQ=60)
GTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCCGTAAGATTGCGTAATCCTGTCACTCTTTCAGTTCGGTAT > M01186:129:000000000‑A5M8V:1:2108:13477:22502/1‑250 (MQ=60)
GTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCCGGAAGATGTCGTAATCCTTTGCCGCTTTCAGTTCGtgat > M01186:129:000000000‑A5M8V:1:1106:12275:14524/1‑246 (MQ=60)
TACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAAA > M01186:129:000000000‑A5M8V:1:2104:20679:14685/1‑251 (MQ=60)
TTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGCTGTCGTAATCC > M01186:129:000000000‑A5M8V:1:2104:12234:21236/1‑219 (MQ=60)
ATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAACAACTCTTTGAA > M01186:129:000000000‑A5M8V:1:2103:16079:10625/1‑251 (MQ=60)
TCTGGTAAGGGGTAAACAGGTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGATTGCGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAA < M01186:129:000000000‑A5M8V:1:2104:13387:14794/250‑1 (MQ=60)
ttggttggtggtaaatgggtgatatcttgttCTGGCGGGGTCGAATTTGTCTTTGTGCTTGCGGTTAAAGTGGAAGTACGCGGAGAAGTGTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTTGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAAC < M01186:129:000000000‑A5M8V:1:1110:14190:26923/220‑1 (MQ=60)
AGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAAAACCCTTTGAAACGCCATG > M01186:129:000000000‑A5M8V:1:1112:23611:5420/1‑250 (MQ=60)
AACAGCTGATA‑TTTTTTGGTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGGGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGT < M01186:129:000000000‑A5M8V:1:2111:14783:21632/251‑1 (MQ=60)
TGATA‑TTTTTTGGTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGAC < M01186:129:000000000‑A5M8V:1:1105:23318:5941/251‑1 (MQ=60)
GATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTGCGCCGTACTCCACCACCATCCGCAGGAGGATGTCGTAATCCTGTGCCGCTTTGAGTTCGGAATCGAACAAACACACTTTGAAACCCCATGCCCAGGGAAAGAA > M01186:129:000000000‑A5M8V:1:2109:12484:19175/1‑250 (MQ=60)
ATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGT > M01186:129:000000000‑A5M8V:1:2106:17899:5686/1‑152 (MQ=60)
A‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACCCTTTGAAAC > M01186:129:000000000‑A5M8V:1:2107:22225:8815/1‑228 (MQ=60)
GCGGGGTCGAATTTTTCTTTGTTGTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGA < M01186:129:000000000‑A5M8V:1:2105:17312:13139/250‑1 (MQ=60)
ctgatTCGAATTTGTCTTTGTGCTTGCGGTAAATGTGCAAGTCCCCGGAGAATTTCTTCGGTGACGGGTTGATCTGCACTTCACCGTTATTGATATGCAGGCTCTGCGTCGCCTCTTCTCCTTTCCTCGGTTCGCCGTCATCCTCCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACCCTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGAT < M01186:129:000000000‑A5M8V:1:1111:11239:15024/245‑1 (MQ=60)
CGCGGTTGAATTTGTCGTTGTGCTTGGGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGATGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGAT < M01186:129:000000000‑A5M8V:1:2103:17808:27543/250‑1 (MQ=60)
cgggtgatTTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATAT < M01186:129:000000000‑A5M8V:1:1105:19047:8692/242‑1 (MQ=60)
CGGTCGAATTTGTTCTTGTTCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCGCCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGGTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAAGCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATAT < M01186:129:000000000‑A5M8V:1:2113:17702:10927/250‑1 (MQ=60)
CGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTGTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATAT < M01186:129:000000000‑A5M8V:1:2102:21774:21670/250‑1 (MQ=60)
GTCGATTTTGTCTTTGTGCTTGCGGTAAAAGTGGATGTACCCGGAGAATTTTTTCGGTGACGGGGTGATCTTCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTG < M01186:129:000000000‑A5M8V:1:2105:13562:6631/250‑1 (MQ=60)
TCTAATTTGGTTTTGTGCTTGCGGGAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTTATCTGCATTTCTCCGTGATTGATATGCAGGCGTGGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCG < M01186:129:000000000‑A5M8V:1:1104:12190:23282/251‑1 (MQ=60)
TCTTTGTGCTTGCTGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACGCTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAA < M01186:129:000000000‑A5M8V:1:1105:20909:23013/251‑1 (MQ=60)
TCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTG < M01186:129:000000000‑A5M8V:1:2104:12291:23366/251‑1 (MQ=60)
TAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCCTTTCCCCGTTATTGGTATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATA < M01186:129:000000000‑A5M8V:1:2104:22714:25826/251‑1 (MQ=60)
AAAAGTGGAAGTGCCCGGAAGATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATAC < M01186:129:000000000‑A5M8V:1:2104:14438:14358/251‑1 (MQ=60)
AAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAACGACCTGGTTCCCAATGACATTGCGTTTCTAGAACAGGCGGCGGGCATACGG > M01186:129:000000000‑A5M8V:1:2112:21955:18646/1‑251 (MQ=60)
CCCGGAGAGTTTTTTCGGTTACGAGGTGATCTGCATTTCCCCGTGATTGATAGGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGAT < M01186:129:000000000‑A5M8V:1:1105:18498:3150/251‑1 (MQ=60)
AATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATTCCCAGGTAAAGACCTGGTTGCCAATGAT > M01186:129:000000000‑A5M8V:1:2104:9133:22227/1‑200 (MQ=60)
AATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGC < M01186:129:000000000‑A5M8V:1:2101:27286:15374/249‑1 (MQ=60)
GATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACAATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGAAAAGACCTGGATGCCAATGTTATTGGGTTTGGAGAACAGACGGCGTGCATACGGCGAGTTGGGAAACAGCTGCAAGCATGCCGGTgggggaa > M01186:129:000000000‑A5M8V:1:1108:9514:25539/1‑244 (MQ=60)
CTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCTCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACTAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTCCCAATGATATTGCGTTTGTAGTACAGTCGGCGTGACTACGTCGATTTGGGATACAGCGGCCAGCTTGACGGTTTGGAATAAA > M01186:129:000000000‑A5M8V:1:1107:24649:13891/1‑251 (MQ=60)
GCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAAAAGGCGGCGTGAAAACGGCGCATTGGGATCCAGCGGCAAGCTTGCCGGTTGGGAATAGA > M01186:129:000000000‑A5M8V:1:1107:26083:12334/1‑249 (MQ=60)
TCCCCGTGATTGATATGCCGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACTTCGCC < M01186:129:000000000‑A5M8V:1:1107:8879:19164/251‑1 (MQ=60)
TATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCCCCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACTTCGCCCTGGCAAACGT < M01186:129:000000000‑A5M8V:1:1101:16185:11681/251‑1 (MQ=60)
TATATGCAGGCTCTGCGGCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAAGTCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACTTCGCCCTGGCAAACGT < M01186:129:000000000‑A5M8V:1:1102:8601:24404/251‑1 (MQ=60)
GATATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGCCGTGAATACGGC > M01186:129:000000000‑A5M8V:1:1104:14171:22016/1‑193 (MQ=60)
ATGCAGGCTCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGAATTCGCCCTGGCAAACGCAGT > M01186:129:000000000‑A5M8V:1:2101:24169:20844/1‑251 (MQ=60)
|
CGCAGATCTTCCAGCATCTTTAGCGCCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCTGCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACTTCGCCCTGGCAAACGTAGT > NC_000913/2132539‑2133030
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
