Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F28 I0 R1
|
67 |
124.6 |
2504412 |
97.6% |
2444306 |
226.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,434,882 |
T→G |
22.9% |
Y252S (TAC→TCC) |
truA ← |
tRNA pseudouridine(38‑40) synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,434,882 | 0 | T | G | 22.9%
| 238.3
/ 11.7
| 93 | Y252S (TAC→TCC) | truA | tRNA pseudouridine(38‑40) synthase |
| Reads supporting (aligned to +/- strand): ref base T (4/64); new base G (22/2); total (27/66) |
| Fisher's exact test for biased strand distribution p-value = 3.99e-15 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTAATATGCATAACGTTGCGCCA > NC_000913/2434653‑2435114
|
tAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACcg < 1:1053206/239‑1 (MQ=255)
tAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACcg < 1:155778/239‑1 (MQ=255)
tAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACcg < 1:1224281/239‑1 (MQ=255)
cccAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTGGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGAc < 1:633622/239‑1 (MQ=255)
cccAGACGCCGTACTCCGCGACCAGCTCTGCCAGACGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGAc < 2:1173277/239‑1 (MQ=255)
aGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGGAAGTCACCGCGACCAg > 1:1050811/1‑239 (MQ=255)
aCGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGTAGAACATACCCGTCAGGGGAATACACCGCGccccaaa > 1:927377/1‑235 (MQ=255)
gTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATCATACCCGTCAGGGGAATCCACCCCGCCCAGATACaa > 1:772786/1‑237 (MQ=255)
tACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATCCTACCCGTCAGGGGAAATCCCCCCGAcccaacacaac > 2:398579/1‑229 (MQ=255)
tACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGGTTTTGGAGATCATACCGGTCAAGGGAATTCACCCCGACCAggaaaaac > 1:181551/1‑231 (MQ=255)
cTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCt < 1:673079/239‑1 (MQ=255)
tGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTtgctgc < 1:386281/237‑1 (MQ=255)
aCGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCa < 2:643145/239‑1 (MQ=255)
aCGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCa < 2:678892/239‑1 (MQ=255)
gTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATTATACAGGGCAGGGAGAATAAACGCCGCCAGATACAACCCTTCCCCTTTT‑TTCGCTGCTGCCCCCacc > 2:687049/1‑237 (MQ=255)
gTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGAACATACCGGGCAGGGGAATCCACCGCGACCAGATACAGCCCCTCCGCCTTT‑TTCGTTTCTgccgcccg > 1:394814/1‑236 (MQ=255)
tgtgCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATGCAAACGGGCAGGGGGAATCACCCCCACCCGAAACAACCCTTTCACTTTTCGCCG‑TGCTTGCCCCA‑GCGTTCt > 2:489726/1‑239 (MQ=255)
gATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGGAGATCCTACCCGTCAGGGGGATCCACCGCGACCACGAACAACCCCTCCCCTTTT‑TCCGGTGGTTCCCCCC‑GCGTCTCG‑TCCttt > 2:1249452/1‑239 (MQ=255)
aTGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCCTACCCGGCACGGGAAACCACCCCGACCAGATACAACCCTTTCCCCTTT‑GTCGTGTGTGCCCCCC‑GCGTTCTG‑TCCTTTGTCGCCCGcc > 1:620004/1‑238 (MQ=255)
aTGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGAACAAAACGGGCAGGGGAAACCACCCCGCCCCGAAACCACCCCTCCCCTTTT‑GTCGTTGCTGCCCCCC‑GCGCTCTG‑TCCTTTgcctcccccc > 2:971606/1‑235 (MQ=255)
aTGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGTAGATCATACCCGTTAGGGGAATCCACCCCGACCAAGTACAACCCTTCCCCCTTT‑TGCGTTTGTGCCCCCC‑GCGGTCTT‑TCCCTTTccgcccgcc > 1:1130400/1‑238 (MQ=255)
tGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCaa < 1:202418/239‑1 (MQ=255)
tGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCa < 1:125034/238‑1 (MQ=255)
cAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAg < 2:724633/239‑1 (MQ=255)
tCCATATTTGCCTATGCTTTGTACACGTCATCTGTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATTTTCCGAGCATTATTCTCGTTAGTCCGCCAGAACTATCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑c < 2:1248905/236‑1 (MQ=255)
ccATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑ctct < 1:723865/238‑1 (MQ=255)
atTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGc < 1:916884/239‑1 (MQ=255)
tGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGTAGATTATACCGGTCAGGGGAATTCACCGCGACCAGATACAGCCCTTCCCCTTTT‑GCCCTTGCTGCCCCCC‑GCGTTCTG‑TCCTTTTCCGCCCGCAACTCTCCTCTTCCG‑CTCTCCgcgttggtgtgg > 1:302398/1‑228 (MQ=255)
tGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATCATACCCGGCAGGGGGAACCACCCCGCCCAGCAACAACCCCTTCGCCTTT‑TCCCTGTGTGCCCCCC‑CCGCTCTT‑TCCTTTTCCCCCCGCCACACCGCTATCCCG‑CCCTCCCGCGGGGTGTgg > 2:1128794/1‑239 (MQ=255)
cTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCa < 1:978464/239‑1 (MQ=255)
ttGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCAc < 1:1219875/239‑1 (MQ=255)
gTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATCATAACGGTCAGGGGAATCCCCCCCGACCCGATACAACCCCTCCGCTTTT‑TCCGTTGCTGCCGCCC‑CCGTTCTG‑TCCTTTTCCGCCCGCAACCCTGCTCTCCCG‑CTCTCCGGCTGGGTGTggggcccgccatc > 2:1142824/1‑228 (MQ=255)
gTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGATTTGGAAGATCATAACGGGTAAGGGAAACCACCCCGACCAGATACACCCCTTCCCCCTTT‑TACGGTGGCGGCGCCACGCG‑TCTGTTCTTTTGCCCCCAG‑AACACCGCCATCCAGCCTCTCGGGGTGG‑TGTgggggccggcctg > 2:859841/1‑228 (MQ=255)
cATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCAc < 1:551569/229‑1 (MQ=255)
tttCAGGCTGTAACTACGTTGGCTACAGCCTGAAAGGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATGGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAgg < 2:645629/239‑1 (MQ=255)
ggCTGTAACTGCGTTGGCGAAAGCCTTAAATGTTCCGAGCATTATTCTCGTTAGTCCTGCAGGAATAGCGGGCCGATTGGCGGTTTTGGAAGATCATACCGGTCAGGGGAATCCACCGCGACCAGATACAGCCCTTCCGCTTTG‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGcc < 2:362416/239‑1 (MQ=255)
gCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGCTTTTGGAGAACACACAGGTCAGGGGAATACCCCCCGACCCGATACAGCCCTTCCGCCTTT‑TGCGTTGCTGCCCCCC‑GCGGGCTG‑TCCTTTTCCCCCACCCACTCTGCTATCCAG‑CTCCCCGCCTGGTTGTGGGCACCGCCCTCCaccccgtctctt > 2:551569/1‑228 (MQ=255)
cTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGcc < 1:838864/237‑1 (MQ=255)
cTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGcc < 1:991678/237‑1 (MQ=255)
cTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGcc < 1:799251/237‑1 (MQ=255)
cTGTAACTACGTTGGCTACAGCCTGAAAGTTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGcc < 1:1199253/237‑1 (MQ=255)
gTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACa < 1:784845/239‑1 (MQ=255)
tAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATCATAACGGTCAGGGGAATCCACCCCGACCAGATACAGCCCTTCCGCTTTT‑TCCGTTGCTGCCGCCC‑GCGGTCTG‑TCCTTTTGCGCCAGCAAATCTGCTATCCAG‑CTCTCCCGCTTGGTGTGGGCCCCGCCTTCCC‑TCCGGCTGCCggcca > 1:172529/1‑235 (MQ=255)
tAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATTATAACGGGCCGGGGAATCCACCCCGACCAGAAACAACCCTTTCCCTTTT‑TCCGGTGCTTCCGCCC‑GCGGTCTT‑TCCTTTGCCGCCAGCCACTCTGCTATCCAG‑CTCTCCGGCTGGGTGTGGGGACCGGCTTCCC‑TCCGGCTGCCGCCaa > 2:666840/1‑239 (MQ=255)
tACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATAtt < 2:869501/239‑1 (MQ=255)
cggtGGCTATAGTCTGAAATTGTCCGTGCATCATTCTCGTTAGTCCGCTAGTAATAGCGTGCCCATTGGCGGTTTTGGAAGCTCATACCGGTCAGGGTGATCCTCCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGGTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCTAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGTGCACCGACTTCCA‑TCAGGCTGCCGACAAGATTcc < 2:468852/236‑1 (MQ=255)
cGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTcc < 1:1142824/239‑1 (MQ=255)
ttGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGcc < 1:1029473/226‑1 (MQ=255)
gCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCAc < 1:1145425/204‑1 (MQ=255)
agaGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCata < 1:389607/237‑1 (MQ=255)
aCAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCata < 1:489726/239‑1 (MQ=255)
ccTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGAACATACCGGTCAGGGGAATCCACCCCGACCAGATACAACCCTTCCGCTTTT‑GCCGTTGCTGCCGCCC‑GCGGTCTG‑TCCTTTTCCGCCAGCAACTCTGCTTTCCCG‑CCCTCCCGCTGGTTGTGGGGACCCACTTCCA‑CCAGGCTGCCCACAATATTc > 2:1029473/1‑226 (MQ=255)
ccTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAgg < 1:1226754/211‑1 (MQ=255)
cTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATatga < 1:491235/237‑1 (MQ=255)
cTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATatga < 2:173407/237‑1 (MQ=255)
cTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATatg < 2:874438/236‑1 (MQ=255)
cTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATatg < 1:666840/236‑1 (MQ=255)
aaaTGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCATACCCGTCAGGGGAAACCACCGCGCACAGATACAGCCCTTCCGCTTTT‑GCCCCTGGTGCCGCCC‑GCGCTCTT‑TCCTTTTCCGCCCGCCAACCTGCTATCCAG‑CCCTCCGGCTGGTTGTGGGCCCCCGCCTCCC‑TCCAGCTGCCGGCCATATTCCTGACCATATGATGT‑Ac > 2:722001/1‑239 (MQ=255)
aaaTGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGAc < 1:1067043/197‑1 (MQ=255)
aTGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACaa < 1:1249452/239‑1 (MQ=255)
aTGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACaa < 1:1032319/239‑1 (MQ=255)
gAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCAtt < 1:179246/239‑1 (MQ=255)
ttattCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCtt < 1:419428/239‑1 (MQ=255)
attCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTa < 1:1183486/239‑1 (MQ=255)
tCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATTATACCCGTCAGGGGAATCCACCCCCACCCGATACAGGCCCTCCCCTTTT‑TCCGTTGTTGCCCCCC‑ACGCTCTT‑TCCTTTTCCGCCCGCAAATCTGCTATCCCG‑CCCCCCCGCCGGGTTTGGGGCCCCCCCTCCATTCAGCCCCCCGACAA‑AATCCTGTCCCCATGTTTTGACAAAA‑CATTCGCTTTTATATATtcca > 2:1049409/1‑238 (MQ=255)
ccGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTaccac < 2:145760/238‑1 (MQ=255)
ccGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTaccac < 1:971606/238‑1 (MQ=255)
ccGCCAGAAATAGCGGGCCCATGGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTaccac < 2:1130400/238‑1 (MQ=255)
ccGCCAGAAATAGCGGCCCCATTGGCGGTTTTGGAAGATAATACCGGTCAGGGTACTCCGCCGCGACCAGATACAGCCCTTCCGCGTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTaccac < 2:874563/238‑1 (MQ=255)
ccGCCAGAAACAGCGGGCCCATTGGCGATTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATCCAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACGCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTaccac < 2:1067497/238‑1 (MQ=255)
cAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGGAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑TCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCCCCAGCAACTCTGCTATCCCG‑CTCTCCCGCTGGGTGTGGGGACCGACTTCCC‑TCAGGCTGCCGACCATATTCCTGACCATATGATGT‑ACAAAAACATTTGCTTTTATATCTACCACcccac > 1:88440/1‑238 (MQ=255)
ccAGTGGCGGTTTCGGAAGCTCAGACCGTTCAGGGTCGTCACCCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCGCCACATAAGGACCGTGAcg < 2:1080162/238‑1 (MQ=255)
cATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGAcgcg < 1:1068587/239‑1 (MQ=255)
cATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGAcgcg < 1:30889/239‑1 (MQ=255)
cATTGGCGGTTGTGGAAGCTCATACCGGTCAGGTGAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGACGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCCCCACATAAGGACCGTGAcgcg < 2:1245106/239‑1 (MQ=255)
cATTGGCGGTTGTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGAcgcg < 1:726786/239‑1 (MQ=255)
aTTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGt < 2:790133/239‑1 (MQ=255)
tGGCGGTTTTGGAAGATCATCCCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGa < 2:302398/239‑1 (MQ=255)
tGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGa < 1:1169257/239‑1 (MQ=255)
ttttTGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTTGTTGTGGGCACCGCCTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTa < 1:859841/238‑1 (MQ=255)
ttttGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTa < 2:181551/238‑1 (MQ=255)
ttttGGAAGATCATACCGGGCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTa < 1:1024755/238‑1 (MQ=255)
tttGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTAat < 1:885680/239‑1 (MQ=255)
tttGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTAat < 1:398579/239‑1 (MQ=255)
aGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTAATATGCa < 1:181689/238‑1 (MQ=255)
cATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTAATATGCATAACg < 1:563256/239‑1 (MQ=255)
tCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTAATATGCTTAACGTTGCGcc > 2:1157741/1‑238 (MQ=255)
tCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTAATATGCATAACGTTGCGcc > 2:1214926/1‑238 (MQ=255)
cAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTAATATGCATAACGTTGCGCCa < 1:148705/238‑1 (MQ=255)
aGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTtg > 1:978854/1‑109 (MQ=255)
aGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTtg < 2:978854/109‑1 (MQ=255)
ggTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCAtt < 1:915685/169‑1 (MQ=255)
ggTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCAtt > 2:915685/1‑169 (MQ=255)
|
TAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTT‑GCCGTTGCTGCCGCCA‑GCGTTCTG‑TCCTTTGCCGCCAGCAACTCTGCTATCCAG‑CTCTCCGGCTGGTTGTGGGCACCGACTTCCA‑TCAGGCTGCCGACAATATTCCTGACCATATGATGT‑ACAAAAGCATTCGCTTTAATATCTACCACCACATAAGGACCGTGACGCGTGACATTAATATGCATAACGTTGCGCCA > NC_000913/2434653‑2435114
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
