Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I0 R1 91 172.1 3477528 97.2% 3380157 226.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,978,166 T→A 14.2% Y245F (TAT→TTT)  lysA ← diaminopimelate decarboxylase, PLP‑binding

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,978,1660TA14.2% 247.6 / 6.2 109Y245F (TAT→TTT) lysAdiaminopimelate decarboxylase, PLP‑binding
Reads supporting (aligned to +/- strand):  ref base T (46/44);  new base A (2/14);  total (50/59)
Fisher's exact test for biased strand distribution p-value = 5.36e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 109 total aligned reads displayed.

CTGATATGGTGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGGTGTACCAG  >  NC_000913/2977947‑2978402
                                                                                                                                                                                                                             |                                                                                                                                                                                                                                             
cTGATATGGTGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGGAATTAATACGCCAGACTGCGCTACCCGGAAGCGACCCGGGTCAATTTCCAGTTTCCCAGGGTGG‑CCCAAAT‑GGCGGGGGATTTGACCACCCGCGGCCGTCCCCCGACCATAATAATTTTCGGTAG‑Caa                                                                                                                                                                                                                            >  2:1002320/1‑238 (MQ=255)
 tGATATGGTGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTTTTTGACGCTCCGCACCTGTGTAATTAATACGCCAGAATGCGCTACCAGGAAGGGACCCCGTTCAATTTCCAGTTTCCAAGGGTGT‑CCCAAAT‑AGCGGGCGGGTTGCTCAACCGCGGTCTTTCCCAGACCATAATAAATTTCGGTAT‑CAAc                                                                                                                                                                                                                           >  2:1229239/1‑238 (MQ=255)
  gagatGGTGTTAACTACCGTACATCGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCCCCCGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCg                                                                                                                                                                                                                         <  2:1554620/236‑1 (MQ=255)
  gATATGGGGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCCCCCCATTTTTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAG‑GGCGGGCGATTTGCTCACGCGCGGCATTCCATAGACCATAATAATGTTCGGTAT‑CAACCg                                                                                                                                                                                                                         <  1:1229239/239‑1 (MQ=255)
       ggtggtAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTTACGCCCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCCCACGCGCCGACTTCCACCAACCATCATAATTGTCGGTAT‑CAACCGCct                                                                                                                                                                                                                      >  2:292645/1‑237 (MQ=255)
       ggtggtAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCCCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCCATTTACAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCCCctct                                                                                                                                                                                                                    >  1:265339/1‑239 (MQ=255)
        gtggtAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCACCAACCAGCACAAAGGGGCGCCTCCCCAGTTGTTGGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGGCACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTGCGGTAT‑CAACCGCctct                                                                                                                                                                                                                    <  2:1085230/238‑1 (MQ=255)
         tggtAACCACCGTACATTGCCGGGCGCATCAGATCGTTGCACCCGGCATCACCCAGCACAAAGTGGCGGCTCCCCCTTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCGCAGACCATAATAATGTTGGGTAT‑CAACCGCCTCtt                                                                                                                                                                                                                   <  2:98774/238‑1 (MQ=255)
           ttAACTACCGTACATGGCCGGGCGCATCGTAACGTCGAACCCGGCATCAACCAGCACAAAGTGGGGGCTCCCCATTTGTTTGACGCTCCGCCCCTGAGTAATTAATACGCCAGACTGCGCTCCCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCa                                                                                                                                                                                                                 <  1:340355/237‑1 (MQ=255)
           gtAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTTACGCCCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCCGTTTCACAGGGTGG‑CCCCAAT‑GGCGGGCGGTTTGCTCACGCGCGGCATTCCACAGACCATAATAAAGTTCCGTAT‑CCACCCCCCCTTcc                                                                                                                                                                                                                 >  2:233067/1‑237 (MQ=255)
           gtAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCACTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCCGCTTCACAGGGGGG‑CCCCAAT‑AGCGGGCCGATTGGTCACACCCGGCACTCCACAAACCATAAAAATGTTCGGTAT‑CAACCGCCTCTTCa                                                                                                                                                                                                                 >  2:403354/1‑238 (MQ=255)
             aaCTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGCCTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCCACA‑TGCGGGCGGATTGCCTCCGCGCGGCCTTTCACAGACCCTAATAATGTTCGGTAT‑CAACCGCCTCTTCAc                                                                                                                                                                                                                >  2:395460/1‑237 (MQ=255)
              aatACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGAGGGGGCGCCCCAATTGTTTGACGCTACGCACCCGACGAATTAACACGCCGGTCCGCGCAACCAGGAAAACCCCCAGCTCAATTTTCAGTTTCACATGGTGG‑CCACAAT‑GGCGGGCGATTTTCACACCCCCGGCATCCCCCAGACCCCAACAAAGCTCGGGTG‑CAACAGCACCTTCAccc                                                                                                                                                                                                              >  2:1689050/3‑238 (MQ=255)
              aCTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGGGG‑CCCAAAT‑GGCGGGCGATTTGCCTACTCGCGGCATTCCCCAGACCCACATAATGTTCGGTAT‑CAACCGCCTCTTccacc                                                                                                                                                                                                              >  2:60369/1‑234 (MQ=255)
                   cGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACCCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCCAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACATACCCTAATAATTTTCGGGAT‑CAACCGCCTCTTTACCCTGTTGa                                                                                                                                                                                                        >  1:1116193/1‑239 (MQ=255)
                    gTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAGGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGAt                                                                                                                                                                                                       <  2:173550/239‑1 (MQ=255)
                      aCATTCCCGGGCCCATCGGATCGTCTACCCCGGCATCAACCAGCACAAAGTGACGGCCCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACGGCGCTACCAGGAAGCGACCCGGTTCAATTGCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAGCCGCCTCTTCACCCTGTTGATa                                                                                                                                                                                                      <  1:1255267/238‑1 (MQ=255)
                          tGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTTACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTTCTCACCCCCGGCATTCCCCAGACCATAAAAATTTTCGGTTT‑CAAACGCCTCTTCACCCTGTTGATAAGGaa                                                                                                                                                                                                 >  1:800347/1‑239 (MQ=255)
                          tGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTTCTTACGCGCGGCCTTCCCCAGAACACAATAATGTTCGGTAT‑CAACCGCCTCTTCCCCCCGTTGGTAAGGaa                                                                                                                                                                                                 >  2:1534500/1‑239 (MQ=255)
                          tGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGaa                                                                                                                                                                                                 >  1:792809/1‑239 (MQ=255)
                          tGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCCCACCCGCGGCATTTCCCAGACCAAAATAATGTTCGGGAT‑CAACCCCCTCTTCCCCCCGTTGATAAGGa                                                                                                                                                                                                  >  2:760155/1‑238 (MQ=255)
                            ccGGGCGCATCAGATCGTTGACCCGGGCATCAACCAGCACAAAGTGGCGTCTCCCCATTTGTTTGACGCTCCGCCCCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTCCCAGTTTCACAGGGTGG‑CCAAAAG‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCAAAATAAGGTGCGGTAC‑CAACCGCCTCTTCACCCTGTTGATAAGGAAc                                                                                                                                                                                                <  2:461469/238‑1 (MQ=255)
                            ccGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGGTTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCCCCTCCTCACCCTTTTGATAAGGAACa                                                                                                                                                                                               >  2:1288971/1‑239 (MQ=255)
                               ggCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGaa                                                                                                                                                                                            >  1:913386/1‑239 (MQ=255)
                                gcgcATCGAATCGTTGAACCCGGCACCACACAGCAAAAAGTGGCGGCCCCCCATTGGTTTGACGCTCCGCACCTGATTAATTAATCCGCCAGACTGCGCTCCCAGGAAGCGACCCGGTTCAATTCCCAGTTTCACAGGGTGG‑CCAAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAC‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGaa                                                                                                                                                                                            <  2:727147/238‑1 (MQ=255)
                                          tCGTTGACCCCGGCATCAACAAGCACAAAGTGGCGGCTCCCCATTGGTTTGGCGCTCCGCACCTGAGTAATTAATCCGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGCCCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCAccg                                                                                                                                                                                   <  1:335734/237‑1 (MQ=255)
                                           cGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCCATTTCCAGTTTCACAGGGTGG‑CCCACAT‑GGCGGGCGATTTGCTCACGCCCGGCATTCCCCAGACCATAATAATGTTCGGTAT‑CAACCCCCTCTTCACCCCGTTGATAAGGGACAGAAAACCCCccgcc                                                                                                                                                                                 >  2:1086405/1‑238 (MQ=255)
                                            gTTGAGCCCGGAATCAACCAGCCCAAGGGGGCGGCTCCCCATTTGTTTGCCGCTCCGCACCTGAGTAATTAATACGCCAGACTGGGCTACCAGGAAGCGACCCGGTTCAATTCCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCAccgcccg                                                                                                                                                                               <  1:911911/239‑1 (MQ=255)
                                            gTTGACCCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCAccgcccg                                                                                                                                                                               <  1:39086/239‑1 (MQ=255)
                                              tGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTTACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACCGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCCTTTGATAAGGAACAAAAAGCCCACCGCCCGCa                                                                                                                                                                             >  2:355482/1‑239 (MQ=255)
                                              tGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGAAGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCCAAT‑GGCGGGCGCATTTCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CCACCGCCCCTTCCCCCTGGTGATAAGGAACAGAAAACCCACCGCCCCCa                                                                                                                                                                             >  1:160439/1‑239 (MQ=255)
                                                                           cggcTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTc                                                                                                                                                >  1:252145/1‑239 (MQ=255)
                                                                           cggcTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTc                                                                                                                                                >  1:177686/1‑239 (MQ=255)
                                                                           cggcTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACCCGCGGCATTCCACAGACCATAATAATGTTCGGGAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTc                                                                                                                                                >  1:1679644/1‑239 (MQ=255)
                                                                                           tgACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCCGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCAc                                                                                                                                 >  2:1630716/1‑238 (MQ=255)
                                                                                           tgACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCAcc                                                                                                                                >  1:624782/1‑239 (MQ=255)
                                                                                            gACGCTCCGCACCTGAGTAATGAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCAAAAT‑GGCGGGCGATTTGCTCACGCGGGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCa                                                                                                                               <  1:909418/239‑1 (MQ=255)
                                                                                               gCTCCGCACCTGAGTAATTAATCCGCCAGACTGCGCTCCCAGGAAGCGCCCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAg                                                                                                                            <  1:760155/239‑1 (MQ=255)
                                                                                               gCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTCCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGCCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAg                                                                                                                            <  1:233067/239‑1 (MQ=255)
                                                                                               ccTCCGCACTTGAGTAATTAACACGCAAGCCGGGGCCACCGGGAAGCGACCGTGTTAAATTACCAG‑TTCACCGGGGGGCCCCAAAT‑GGCGGGCGTTTTCCTCCCGCGCGGCATCCCAAAGACCAAAAAAATGTTCGGTAC‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAg                                                                                                                            <  2:1199364/238‑1 (MQ=255)
                                                                                                   cGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGGTTTGATCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCGCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCACCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGTTGCCCTGACACACCATAGcccc                                                                                                                        >  2:19721/1‑239 (MQ=255)
                                                                                                   cGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGcacc                                                                                                                        >  1:580224/1‑239 (MQ=255)
                                                                                                   cGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGcacc                                                                                                                        >  1:1245008/1‑239 (MQ=255)
                                                                                                    gccccTGAGTAATTAATACGCAAGACTGCTCTACCAGGAAGCGACCCGGTTCAATTCCCATTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTGGCCCACGCGCGGCATTCCACAGACCATAATAGTGTGCGGTAC‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGcacca                                                                                                                       <  2:230230/236‑1 (MQ=255)
                                                                                                    gcacaagAGTAATTAATCCGCCAGACTGCGCTACCAGGAGCGGCCCCGGTTCAATTTCAAGTTTCACAGGGTGG‑CCCAAAT‑GAGGGGCGATTTGCGCACCCGCGGCAGCCCACAGACCATAAAAATGTCCGTTAC‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGcacca                                                                                                                       <  2:1416420/233‑1 (MQ=255)
                                                                                                    gCACCTGAGTAATAAATACGCCAGACTGCGCTCCCAGAAAGCGACCCGGTTCAATTTCCAGCTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGCCCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGcacca                                                                                                                       <  1:403354/239‑1 (MQ=255)
                                                                                                    gCACCGGAGAAATTATTCCGCCAGCCGGCGCTACCAGGAAGCCACCCGGTCCAATTTCCAGTTTCCCAGGGTGG‑CCAAAAG‑GGCGGGCGATTTGCTCCCCCGCGGCATTCCACAAACCATAATAATGTTCGTTAC‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGcacca                                                                                                                       <  2:223294/239‑1 (MQ=255)
                                                                                                    cccccTGAGTAATTAATACGCCAGACGGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCAAAAT‑GGCGGGCGATTTGCTCACGCGCGCCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGcacca                                                                                                                       <  1:77101/236‑1 (MQ=255)
                                                                                                       ccTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACcacac                                                                                                                    <  1:1086405/239‑1 (MQ=255)
                                                                                                         tGATTAATTAATCCGCCGACCTGCGCTCCCGGGAAGCGACCCGTTTAAATTTCCAGTTTCACAGGGGGG‑CCAAAAT‑GGCGGGCTATTTGCTCCCGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCacacac                                                                                                                  <  2:1292301/239‑1 (MQ=255)
                                                                                                           aGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACcacaca                                                                                                                   >  1:230230/1‑236 (MQ=255)
                                                                                                           aGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCt                                                                                                                >  2:980185/1‑239 (MQ=255)
                                                                                                             taataagtccGCCAGACTGCGTCACCGGGAACCGACCGGTGTCAATTTCCTGTTTCACGGGGGGC‑CCCAAAG‑GCCGGGCGTTTTCCCCCCGCGCGGCATTCCACAGACCAAAAAAATGTTCGGTAC‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGcacca                                                                                                                       <  2:460753/221‑1 (MQ=255)
                                                                                                                 taatCCGCCAGACGGCGCTACCAGGAAGCGACCCGTTTCAATTCCCAGTTTCACAGGGTGG‑CCAAAAG‑GGCGGGCGATTTGCCCACGCGCGGCATCCCACAGACAAAAATAAGGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACAcc                                                                                                                 <  2:44485/232‑1 (MQ=255)
                                                                                                                       gCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGtt                                                                                                             >  1:460753/1‑230 (MQ=255)
                                                                                                                         cAGACTGCGCTCCCAGGAGGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCCCGCGCGGCATTCCACAGACCATAAAAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCa                                                                                                  <  1:395460/239‑1 (MQ=255)
                                                                                                                           gACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGAt                                                                                                       >  1:44485/1‑232 (MQ=255)
                                                                                                                            aCTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATaa                                                                                               >  1:1668374/1‑239 (MQ=255)
                                                                                                                               ggcgtACCAGGGAGCGACCCGGTGAAATTCCGTGGTACCGAGGGGGG‑ACAAAGT‑GGTGGGCGTTTGCCTCCCCCGCGGATTTCCCAGGCCCATAATAAGGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCGGCCGCACCATAGCACCGCACACCTGTTCCAGATGGGCATAATCa                                                                                            <  2:1017825/235‑1 (MQ=255)
                                                                                                                                 gcTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCaa                                                                                           >  1:349290/1‑238 (MQ=255)
                                                                                                                                   tACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACg                                                                                         >  1:1255362/1‑238 (MQ=255)
                                                                                                                                          aaGCGACCCGGTTCAATTTCCATTTCCACGGGGTGG‑CCAAAAT‑GGCGGGCGATTTCCTCACGCGCGGCATTCCACAGACCAAAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAAc                                                                                  <  2:792809/238‑1 (MQ=255)
                                                                                                                                           aGCGACCGGGTCCAATTTCCAGTTCACCAGGGTGC‑CCCAAAT‑GCCGGGCAATTTGCCCACGCGCGGCATCCCACCGACAATAATAAGTTCCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAAACCTGACCGAAGTCGATGACCTGACGCACCATAGCACCACACCCCTGTTCCAGAGGGGCATAATCAACGCCAGAACCa                                                                                <  2:1592732/239‑1 (MQ=255)
                                                                                                                                              gACCGGGTTCAATTCCCAGTTTCACGGGGTGG‑CCAAAAT‑GGCGGGCGATTTGCCCACGCGCGGCATTCCAAAGACCAAAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAAt                                                                              <  2:1562112/238‑1 (MQ=255)
                                                                                                                                               aCCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAAtgt                                                                            >  1:1436860/1‑239 (MQ=255)
                                                                                                                                               aCCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAAtgt                                                                            >  2:375982/1‑239 (MQ=255)
                                                                                                                                               aCCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAAtgt                                                                            >  2:1016997/1‑239 (MQ=255)
                                                                                                                                               aCCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAAtgt                                                                            >  2:603663/1‑239 (MQ=255)
                                                                                                                                                   ggTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCAt                                                                        >  1:1592732/1‑239 (MQ=255)
                                                                                                                                                          tttCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGCTTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAAt                                                                  >  2:1387860/1‑238 (MQ=255)
                                                                                                                                                                     acaGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTg                                                      <  1:375982/239‑1 (MQ=255)
                                                                                                                                                                        gggTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAg                                                   >  2:1664852/1‑239 (MQ=255)
                                                                                                                                                                          gTGG‑CCCAAGT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACAATAATAATGTTCGGTAT‑CACCCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAga                                                  <  2:572675/238‑1 (MQ=255)
                                                                                                                                                                           tGG‑GCCAAATGGGCGGGCGTTTCGCTCCCGCGCGGCATCCCACAACCAAAAAAAATTTTCGGAAC‑CAACCGCCTCTTCACCCTTTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAga                                                  <  2:1086141/238‑1 (MQ=255)
                                                                                                                                                                               cccAAAT‑GGCGGGCGTTTTGCCCCCGCGCGGCATTCCACAGACCAAAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAgatgat                                              <  2:177686/238‑1 (MQ=255)
                                                                                                                                                                               ccaaaaG‑GGCGGGCGATTTGCTCACGCGCGGCATTCCAAAGACCATAAAAATGTTCGTTAC‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAgatgat                                              <  2:1668374/235‑1 (MQ=255)
                                                                                                                                                                                ccAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAGCCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGatgatg                                             <  1:1373022/238‑1 (MQ=255)
                                                                                                                                                                                  aaaT‑GGCGGTCGGTTTGCCCAGGGCCGGAATTCACCAGCCCAAAATAA‑GGGCGGTTTACAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCAACACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACg                                          <  2:265339/239‑1 (MQ=255)
                                                                                                                                                                                  aaaT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGTTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACg                                          <  2:580224/239‑1 (MQ=255)
                                                                                                                                                                                    aT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGtt                                        <  1:980185/239‑1 (MQ=255)
                                                                                                                                                                                    aT‑GGCGGGCGATTTGCTCACCCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGCAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGtt                                        >  2:70622/1‑239 (MQ=255)
                                                                                                                                                                                         cgggcgATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTa                                     >  1:1020397/1‑238 (MQ=255)
                                                                                                                                                                                         cgggcgATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAACACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTa                                     >  1:757054/1‑238 (MQ=255)
                                                                                                                                                                                           ggcgATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACg                                          >  2:1464285/1‑231 (MQ=255)
                                                                                                                                                                                           ggcgATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACg                                          <  1:1464285/231‑1 (MQ=255)
                                                                                                                                                                                           ggcgATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATc                                   <  1:355482/238‑1 (MQ=255)
                                                                                                                                                                                                      cACGCGCGGCATCCCACAGACAAAAAAAATGTTCGGTAC‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTgcg                       <  2:913386/239‑1 (MQ=255)
                                                                                                                                                                                                                atcccACACACAAAAATAAATTCCGGTAT‑AACCCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGAt             <  2:81544/236‑1 (MQ=255)
                                                                                                                                                                                                                aTTCCCCAGACCATAATAAGGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGAt             <  1:60369/239‑1 (MQ=255)
                                                                                                                                                                                                                aTTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGAt             <  1:1016997/239‑1 (MQ=255)
                                                                                                                                                                                                                aTTCCACAGACAATAAAAATCTGCGGCAC‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGAt             <  2:800347/239‑1 (MQ=255)
                                                                                                                                                                                                                  cccACAGACAAAAAAAATGTTCGGTAT‑AAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCg           <  2:1679644/238‑1 (MQ=255)
                                                                                                                                                                                                                   ccACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCgg          >  1:716273/1‑239 (MQ=255)
                                                                                                                                                                                                                    cacggcccAAAATAATGTCCGGTCT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGgt         <  1:19721/233‑1 (MQ=255)
                                                                                                                                                                                                                    cacaGACCATAATAATGTTCGTTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGgt         <  1:1624230/239‑1 (MQ=255)
                                                                                                                                                                                                                    cacaGACCATAAAAATGTCCGTTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGgt         <  2:1245008/239‑1 (MQ=255)
                                                                                                                                                                                                                    cacaGACAATAAAAACTGTCGGAAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCCCGTCCAGTGCGGCGGGCAGATCGgt         <  2:155881/239‑1 (MQ=255)
                                                                                                                                                                                                                         aCCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGGGGTAcc    >  1:1207665/1‑239 (MQ=255)
                                                                                                                                                                                                                          ccATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGGTGTAcc    <  1:969567/238‑1 (MQ=255)
                                                                                                                                                                                                                           cATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGCTCGGGGTAcccg  >  2:142790/1‑237 (MQ=255)
                                                                                                                                                                                                                             |                                                                                                                                                                                                                                             
CTGATATGGTGGTAACTACCGTACATTGCCGGGCGCATCAGATCGTTGAACCCGGCATCAACCAGCACAAAGTGGCGGCTCCCCATTTGTTTGACGCTCCGCACCTGAGTAATTAATACGCCAGACTGCGCTACCAGGAAGCGACCCGGTTCAATTTCCAGTTTCACAGGGTGG‑CCCAAAT‑GGCGGGCGATTTGCTCACGCGCGGCATTCCACAGACCATAATAATGTTCGGTAT‑CAACCGCCTCTTCACCCTGTTGATAAGGAACAGAAAGCCCACCGCCCGCAGAAATAGCCTGTAAATCCTGACCGAATTCGATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAATGTGCATGTGAATGCCGACCAGCTGCAGATGATGACGTTGTATCACGTCCAGTGCGGCGGGCAGATCGGTGTACCAG  >  NC_000913/2977947‑2978402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A