Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
66 |
46.7 |
5280542 |
98.1% |
5180211 |
47.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_017635 |
2,860,853 |
C→A |
R442S (AGG→AGT) |
qseE ← |
two component system sensor histidine kinase QseE/GlrK |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_017635 | 2,860,853 | 0 | C | A | 100.0%
| 310.0
/ NA
| 78 | R442S (AGG→AGT) | qseE | two component system sensor histidine kinase QseE/GlrK |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (38/40); total (38/40) |
CGTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCCCTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTTT > NC_017635/2860810‑2860897
|
cgtcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTgg > 2:413525/1‑48 (MQ=255)
gtcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACt < 2:1730334/45‑1 (MQ=255)
gtcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTg < 2:664285/46‑1 (MQ=255)
tcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGc > 1:1235561/1‑47 (MQ=255)
tcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCa < 2:144680/48‑1 (MQ=255)
tcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCa < 1:2126110/48‑1 (MQ=255)
tcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCa < 1:503900/48‑1 (MQ=255)
tcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCa < 2:104168/48‑1 (MQ=255)
tcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCa < 1:189170/48‑1 (MQ=255)
tcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCa < 1:1761683/48‑1 (MQ=255)
tcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCa < 2:116772/48‑1 (MQ=255)
tcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCa < 2:1439274/48‑1 (MQ=255)
tcgACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCa < 2:910336/48‑1 (MQ=255)
ccAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGc < 2:1481338/48‑1 (MQ=255)
cAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCt > 2:2265256/1‑48 (MQ=255)
aGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCtt < 2:1747410/48‑1 (MQ=255)
aGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCtt < 1:2443583/48‑1 (MQ=255)
gATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTa < 1:1767687/48‑1 (MQ=255)
aTACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTaa > 1:1100381/1‑48 (MQ=255)
aTACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTaa < 2:1663826/48‑1 (MQ=255)
tACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAAt > 1:1025981/1‑48 (MQ=255)
tACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAAt > 1:1385479/1‑48 (MQ=255)
tACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAAt > 2:1309396/1‑48 (MQ=255)
tACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAAt > 1:1737683/1‑48 (MQ=255)
tACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAAt > 1:2597957/1‑48 (MQ=255)
tACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAAt > 1:2547669/1‑48 (MQ=255)
aCAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATc > 1:2018770/1‑48 (MQ=255)
aCAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATc > 1:2142125/1‑48 (MQ=255)
cAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATc < 1:1913166/47‑1 (MQ=255)
aGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATcc > 2:2139962/1‑47 (MQ=255)
aGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATcc > 1:590828/1‑47 (MQ=255)
aGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATcc > 1:87656/1‑47 (MQ=255)
ttCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATcc > 2:737597/1‑45 (MQ=255)
ttCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATcc > 1:85478/1‑45 (MQ=255)
tCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGa > 2:875533/1‑48 (MQ=255)
cccTTGCATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGAcc > 2:166840/1‑48 (MQ=255)
tGCATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTg > 2:576971/1‑48 (MQ=255)
gCATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCt < 2:1520909/46‑1 (MQ=255)
cATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGcc < 1:2503024/48‑1 (MQ=255)
cATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGcc > 2:2397647/1‑48 (MQ=255)
cATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGcc < 1:1484351/48‑1 (MQ=255)
cATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGcc < 1:462518/48‑1 (MQ=255)
cATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGcc < 1:2588223/48‑1 (MQ=255)
cATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGcc < 2:599832/48‑1 (MQ=255)
cATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGc < 2:2082365/47‑1 (MQ=255)
aTACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGccc < 1:2309141/48‑1 (MQ=255)
aTACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGccc < 2:1424957/48‑1 (MQ=255)
aTACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGccc < 2:1479997/48‑1 (MQ=255)
aTACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGccc < 1:14593/48‑1 (MQ=255)
aTACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGccc > 1:465234/1‑48 (MQ=255)
tACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCt > 1:855236/1‑48 (MQ=255)
tACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCt > 2:363720/1‑48 (MQ=255)
aCGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCtt > 1:1901355/1‑48 (MQ=255)
aCGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCtt > 1:1561547/1‑48 (MQ=255)
aCGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCtt > 1:540694/1‑48 (MQ=255)
aCGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCtt > 2:2107614/1‑48 (MQ=255)
cGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTc < 2:2146050/48‑1 (MQ=255)
ggCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCa < 1:872159/48‑1 (MQ=255)
ggCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCa < 1:2167407/48‑1 (MQ=255)
ggCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCa < 1:836787/48‑1 (MQ=255)
aTACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcc < 2:1882975/48‑1 (MQ=255)
aTACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcc > 1:1489305/1‑48 (MQ=255)
aTACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcc > 2:1619024/1‑48 (MQ=255)
aTACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcc > 2:2259413/1‑48 (MQ=255)
aTACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcc > 2:2364511/1‑48 (MQ=255)
tACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGccc > 1:1484501/1‑48 (MQ=255)
tACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGccc > 1:1709013/1‑48 (MQ=255)
tACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGccc > 2:2542570/1‑48 (MQ=255)
aCAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcccc > 1:2101762/1‑48 (MQ=255)
aCAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcccc > 1:17093/1‑48 (MQ=255)
cAATCACTGGCACTGCTTAACCCCAGACCGCTGCCCTTCACCGcccc < 1:736681/47‑1 (MQ=37)
cAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcccc < 2:155292/47‑1 (MQ=255)
cAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcccc < 1:357094/47‑1 (MQ=255)
cAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcccc < 1:2419317/47‑1 (MQ=255)
cAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGcccc < 1:2510669/47‑1 (MQ=255)
aaTCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCtt < 2:854080/48‑1 (MQ=255)
aaTCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCtt < 1:1920077/48‑1 (MQ=255)
aTCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCttt > 1:1546887/1‑48 (MQ=255)
|
CGTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCCCTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTTT > NC_017635/2860810‑2860897
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCTCTCGTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCCCTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTTTTCGCTG > NC_017635/2860804‑2860903
|
CGCTCTCGTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCAC < M01420:84:000000000‑ABVEH:1:2112:15201:11305/51‑1 (MQ=60)
GCTCTCGTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACT > M01420:84:000000000‑ABVEH:1:1102:21551:14547/1‑51 (MQ=60)
CTCGTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTG < M01420:84:000000000‑ABVEH:1:1110:19429:16504/49‑1 (MQ=60)
CTCGTCGACCAGATACAGTTCCCCTTGCATACGACGAATACAATCACTGGC > M01420:84:000000000‑ABVEH:1:2114:12261:2547/1‑51 (MQ=60)
CGTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCA > M01420:84:000000000‑ABVEH:1:1111:21017:16491/1‑50 (MQ=60)
GTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAAT < M01420:84:000000000‑ABVEH:1:1105:10503:11643/51‑1 (MQ=60)
GTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAAT < M01420:84:000000000‑ABVEH:1:2101:19728:27808/51‑1 (MQ=60)
GTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAAT < M01420:84:000000000‑ABVEH:1:2105:7580:7282/51‑1 (MQ=60)
GTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAAT < M01420:84:000000000‑ABVEH:1:1102:23895:18329/51‑1 (MQ=60)
GACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCT > M01420:84:000000000‑ABVEH:1:2111:16887:9112/1‑51 (MQ=60)
CAGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAA < M01420:84:000000000‑ABVEH:1:2107:25932:24029/51‑1 (MQ=60)
AGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAAT < M01420:84:000000000‑ABVEH:1:2102:15880:3383/51‑1 (MQ=60)
AGATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAAT > M01420:84:000000000‑ABVEH:1:1110:10919:13410/1‑51 (MQ=60)
GATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATC > M01420:84:000000000‑ABVEH:1:2109:18603:7809/1‑51 (MQ=60)
GATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATC > M01420:84:000000000‑ABVEH:1:1112:23463:22428/1‑51 (MQ=60)
GATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATC > M01420:84:000000000‑ABVEH:1:2101:25133:21421/1‑51 (MQ=60)
GATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATC > M01420:84:000000000‑ABVEH:1:2110:13181:2966/1‑51 (MQ=60)
GATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATC > M01420:84:000000000‑ABVEH:1:2108:27933:20970/1‑51 (MQ=60)
GATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATC > M01420:84:000000000‑ABVEH:1:1109:10086:21900/1‑51 (MQ=60)
ATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATCC > M01420:84:000000000‑ABVEH:1:2105:22409:10702/1‑51 (MQ=60)
ATACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATCC > M01420:84:000000000‑ABVEH:1:2104:15807:8926/1‑51 (MQ=60)
ACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATCCC > M01420:84:000000000‑ABVEH:1:1101:6098:21216/1‑50 (MQ=60)
ACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATCCC < M01420:84:000000000‑ABVEH:1:2103:28433:10823/50‑1 (MQ=60)
ACAGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATCCC > M01420:84:000000000‑ABVEH:1:1106:9972:5104/1‑50 (MQ=60)
AGTTCCCCTTGCATACGGCGAATACAATCACTGGCAATGCTTAATCCC > M01420:84:000000000‑ABVEH:1:1101:15422:20753/1‑48 (MQ=60)
GCATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCT > M01420:84:000000000‑ABVEH:1:1105:16393:1680/1‑51 (MQ=60)
GCATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCT < M01420:84:000000000‑ABVEH:1:2108:14643:12569/51‑1 (MQ=60)
GCATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCT < M01420:84:000000000‑ABVEH:1:1104:20780:27830/51‑1 (MQ=60)
GCATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCT < M01420:84:000000000‑ABVEH:1:2109:20386:5494/51‑1 (MQ=60)
GCATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCT < M01420:84:000000000‑ABVEH:1:1113:9401:18306/51‑1 (MQ=60)
GCATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCC < M01420:84:000000000‑ABVEH:1:2112:23845:9864/50‑1 (MQ=60)
CATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTT < M01420:84:000000000‑ABVEH:1:1101:10136:6469/51‑1 (MQ=60)
CATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTT < M01420:84:000000000‑ABVEH:1:2106:18006:20561/51‑1 (MQ=60)
CATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTT > M01420:84:000000000‑ABVEH:1:1108:8495:11625/1‑51 (MQ=60)
ATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTC > M01420:84:000000000‑ABVEH:1:1105:6952:18738/1‑51 (MQ=60)
ATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTC > M01420:84:000000000‑ABVEH:1:2103:22014:8380/1‑51 (MQ=60)
ATACGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTC > M01420:84:000000000‑ABVEH:1:1114:9805:10273/1‑51 (MQ=60)
CGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACC < M01420:84:000000000‑ABVEH:1:2111:17154:13902/51‑1 (MQ=60)
CGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACC < M01420:84:000000000‑ABVEH:1:1108:16330:14883/51‑1 (MQ=60)
CGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACC < M01420:84:000000000‑ABVEH:1:2105:5796:15527/51‑1 (MQ=60)
CGGCGAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACC < M01420:84:000000000‑ABVEH:1:1108:22061:7808/51‑1 (MQ=60)
GAATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCC > M01420:84:000000000‑ABVEH:1:1113:20023:19243/1‑51 (MQ=60)
AATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCC > M01420:84:000000000‑ABVEH:1:2101:16638:15786/1‑51 (MQ=60)
AATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCC > M01420:84:000000000‑ABVEH:1:1113:5365:18334/1‑51 (MQ=60)
ATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCT > M01420:84:000000000‑ABVEH:1:2104:19901:26190/1‑51 (MQ=60)
ATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCT > M01420:84:000000000‑ABVEH:1:2110:23199:20745/1‑51 (MQ=60)
ATACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCT > M01420:84:000000000‑ABVEH:1:1101:14390:7054/1‑51 (MQ=60)
ATAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTTT > M01420:84:000000000‑ABVEH:1:2112:4327:14234/1‑51 (MQ=60)
ACAATCACTGGCACTGCTTAACCCCAGACCGCTGCCCTTCACCGCCCCTT < M01420:84:000000000‑ABVEH:1:1107:8076:11392/50‑1 (MQ=44)
ACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTT < M01420:84:000000000‑ABVEH:1:2108:19803:13983/50‑1 (MQ=60)
ACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTT < M01420:84:000000000‑ABVEH:1:2107:2442:18995/50‑1 (MQ=60)
ACAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTT < M01420:84:000000000‑ABVEH:1:1104:6729:4814/50‑1 (MQ=60)
CAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTTTT < M01420:84:000000000‑ABVEH:1:2103:5937:12181/51‑1 (MQ=60)
CAATCACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTTTT > M01420:84:000000000‑ABVEH:1:1114:18588:7240/1‑51 (MQ=60)
ACTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTTTTCGCTG > M01420:84:000000000‑ABVEH:1:1102:27274:8304/1‑51 (MQ=60)
|
CGCTCTCGTCGACCAGATACAGTTCCCCTTGCATACGGCGAATACAATCCCTGGCAATGCTTAATCCCAGACCGCTGCCCTTCACCGCCCCTTTTCGCTG > NC_017635/2860804‑2860903
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
