Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
73,833 |
A→G |
I230T (ATC→ACC) |
yabK ← |
putative transport system permease protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 73,833 | 0 | A | G | 99.5%
| 628.4
/ ‑5.1
| 200 | I230T (ATC→ACC) | yabK | putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (104/95); total (105/95) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01 |
Only 100 of 205 total aligned reads displayed.
AACAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGATTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCA > NC_000913/73743‑73922
|
aaCAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGtt < 2:3229880/93‑1 (MQ=255)
aaCAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGtt > 2:3541029/1‑93 (MQ=255)
aaCAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGtt < 1:3420889/93‑1 (MQ=255)
aaCAGCACCAGCCCGAGGCAGCACACCATCTGGAGAAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGtt < 1:2063127/93‑1 (MQ=255)
aCAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTg > 2:2880792/1‑93 (MQ=255)
aCAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTg > 2:1814672/1‑93 (MQ=255)
aCAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTg < 1:1601326/93‑1 (MQ=255)
aGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGcc < 1:1948693/93‑1 (MQ=255)
gCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCa > 2:2484810/1‑93 (MQ=255)
gCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCa > 1:930430/1‑93 (MQ=255)
gCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCa > 1:3862149/1‑93 (MQ=255)
gCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCa < 1:34422/93‑1 (MQ=255)
cAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTc > 2:2552228/1‑93 (MQ=255)
aGCCCGAGGCAGCACACCATCTGGAGCGGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGGTGCCAGCTCg > 1:2593406/1‑93 (MQ=255)
gCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGa < 2:2620236/93‑1 (MQ=255)
cccGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGAt < 2:426119/93‑1 (MQ=255)
cccGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGAt < 2:651271/93‑1 (MQ=255)
cccGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGAt > 1:2081343/1‑93 (MQ=255)
ccGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATa > 2:4272957/1‑93 (MQ=255)
gAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGt < 2:861836/93‑1 (MQ=255)
ggCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTgg < 2:2174230/93‑1 (MQ=255)
cagcaCACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTc < 1:119407/93‑1 (MQ=255)
cagcaCACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTc > 2:1529139/1‑93 (MQ=255)
acCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTgg > 1:3232341/1‑92 (MQ=255)
aTCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGa < 1:3657950/93‑1 (MQ=255)
tCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGATGCCAGCTCGATAGTGGTCGCCTGCGGAc > 1:4587968/1‑93 (MQ=255)
cTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGAcc < 2:1078890/93‑1 (MQ=255)
tGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCg > 1:4067645/1‑93 (MQ=255)
tGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCg > 1:2283753/1‑93 (MQ=255)
gAGCAGCCCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCCCCTGCGGACCGcc < 1:399227/93‑1 (MQ=255)
gcgcCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCa < 2:4143957/93‑1 (MQ=255)
gcgcCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCa < 2:894087/93‑1 (MQ=255)
gcgcCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCa > 1:3914941/1‑93 (MQ=255)
gcgcCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCa < 1:4375192/93‑1 (MQ=255)
aGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGAt > 2:3479539/1‑93 (MQ=255)
gCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATa > 2:2980348/1‑93 (MQ=255)
gCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATa < 1:4511907/93‑1 (MQ=255)
aTTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGc < 1:837623/93‑1 (MQ=255)
aTTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGc > 1:2735220/1‑93 (MQ=255)
ttGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCa > 2:1961548/1‑93 (MQ=255)
tGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCAc < 2:4333436/93‑1 (MQ=255)
gcgcgGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTg < 2:77891/93‑1 (MQ=255)
gcgcgGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTg > 2:4467483/1‑93 (MQ=255)
cgGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCg < 2:1708931/93‑1 (MQ=255)
gggCAGGATCG‑AGTCGTAACTCAGCGCCTGATAGGGTGCCAGCTCGATAGTGGTCGCCTGCGGACCCCCCCCCCGCGATAGCACGGGGGCGaa > 2:3942442/1‑93 (MQ=255)
ggCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCgca > 2:362843/1‑91 (MQ=255)
ggCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGaa > 2:4204303/1‑93 (MQ=255)
ggCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGaa < 1:2187454/93‑1 (MQ=255)
ggCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGaa < 2:33928/93‑1 (MQ=255)
gCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAg < 2:4107425/93‑1 (MQ=255)
cAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGc < 2:602647/93‑1 (MQ=255)
cAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGc < 2:3844361/93‑1 (MQ=255)
aGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCTGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCt > 1:769916/1‑93 (MQ=255)
aGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCt > 2:1350541/1‑93 (MQ=255)
aGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCt > 2:2839164/1‑93 (MQ=255)
aGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCt < 2:1571630/93‑1 (MQ=255)
ggATCGTAGTCGTATCTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTg < 1:1544749/93‑1 (MQ=255)
ggATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTg > 1:2489535/1‑93 (MQ=255)
ggATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTg > 1:2593343/1‑93 (MQ=255)
gATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTgg < 1:172316/93‑1 (MQ=255)
aTCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGc < 2:4296747/93‑1 (MQ=255)
aTCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGc > 1:3174683/1‑93 (MQ=255)
aTCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGc > 1:2822862/1‑93 (MQ=255)
cGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGCGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGa > 1:132492/1‑93 (MQ=255)
gTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGaa > 1:1571578/1‑93 (MQ=255)
gTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGaa > 1:3244857/1‑93 (MQ=255)
gTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGaa > 2:2776297/1‑93 (MQ=255)
tAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGaga > 1:1432230/1‑91 (MQ=255)
tAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGaaa < 2:1305468/93‑1 (MQ=255)
tAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGaaa > 1:381308/1‑93 (MQ=255)
gTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACa > 1:3560208/1‑93 (MQ=255)
tCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACag > 2:3450523/1‑93 (MQ=255)
tCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACag > 1:984782/1‑93 (MQ=255)
cGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACaga < 1:3761675/93‑1 (MQ=255)
cGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACaga < 1:2449266/93‑1 (MQ=255)
gTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACagag > 1:3353735/1‑93 (MQ=255)
gTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACagag < 1:1807111/93‑1 (MQ=255)
gTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACagag > 2:1744802/1‑93 (MQ=255)
tAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGc < 1:3305942/93‑1 (MQ=255)
aaCTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCa < 2:2432776/93‑1 (MQ=255)
aCTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCAt > 2:47723/1‑93 (MQ=255)
aCTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCAt > 2:967268/1‑93 (MQ=255)
cTCAGGGCCTGATAGGTTGCCGGGCCGATAGGGGTGCCCCGCGGACCGCCCCCCAGCAATGGCACGGTGGCGAAGTCGGCGAAACAGTACATa > 2:760829/1‑93 (MQ=255)
cTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATa > 1:1142747/1‑93 (MQ=255)
cTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATa < 1:1280733/93‑1 (MQ=255)
aGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAg > 2:2109276/1‑93 (MQ=255)
cgcCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGAt < 2:1482042/93‑1 (MQ=255)
cgcCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGAt < 2:3070968/93‑1 (MQ=255)
gcCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATa > 2:1212115/1‑93 (MQ=255)
ccTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATaa < 2:1134458/93‑1 (MQ=255)
ccTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATaa > 2:3803903/1‑93 (MQ=255)
ccTGATAGGTTGCCAGCTCGATAGTGGACGCCTGCGGACCGCGCCCCAGCGACAGCACGGTGGGGAAGCTGGCGAAACAGAGCATAAAGATaa > 2:2346667/1‑93 (MQ=255)
cTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAg > 1:645349/1‑93 (MQ=255)
cTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAg < 2:1790886/93‑1 (MQ=255)
tGATAGGTTGCGAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAgc < 2:4394242/93‑1 (MQ=255)
tGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAgc > 1:3793616/1‑93 (MQ=255)
tGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAgc > 2:2130367/1‑93 (MQ=255)
gATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAgcg > 1:4226572/1‑93 (MQ=255)
gATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAgag > 2:2292547/1‑91 (MQ=255)
tAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCgca > 1:3520123/1‑93 (MQ=255)
|
AACAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGATTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCA > NC_000913/73743‑73922
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAACAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGATTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCAGCAA > NC_000913/73742‑73926
|
CAACAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTT < SRR4302535.3117635/94‑1 (MQ=60)
CAACAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTT < SRR4302535.451586/94‑1 (MQ=60)
AACAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTG < SRR4302535.3259062/94‑1 (MQ=60)
AACAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTG < SRR4302535.3444681/94‑1 (MQ=60)
AACAGCACCAGCCCGAGGCAGCACACCATCTGGAGAAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTG < SRR4302535.2077998/94‑1 (MQ=60)
ACAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGC < SRR4302535.1612877/94‑1 (MQ=60)
CAGCACCACCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAAATCAGCGCCTCATAGGTTGCA > SRR4302535.2430038/1‑94 (MQ=60)
AGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCA > SRR4302535.3888722/1‑94 (MQ=60)
AGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCA < SRR4302535.1962721/94‑1 (MQ=60)
AGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCA > SRR4302535.1603623/1‑94 (MQ=60)
AGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCA > SRR4302535.937009/1‑94 (MQ=60)
GCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAG < SRR4302535.34687/94‑1 (MQ=60)
GCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAG < SRR4302535.917794/94‑1 (MQ=60)
CAGCCCGAGGCAGCACACCATCTGGAGCGGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGGTGCCAGCTCG > SRR4302535.2612036/1‑94 (MQ=60)
CAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCG < SRR4302535.3784621/94‑1 (MQ=60)
GCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGAT > SRR4302535.2096336/1‑94 (MQ=60)
GCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGAT > SRR4302535.1918304/1‑94 (MQ=60)
AGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGG > SRR4302535.356441/1‑94 (MQ=60)
AGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGG < SRR4302535.1197191/94‑1 (MQ=60)
GGCAGCACACCATCTGGAGCAGCGCCGGCATTGCCGCGCGGGAAGGATCGTAGTCGTAACTCAGGGCCTGATTGGTTGCCAGCTCGATAGTGGT > SRR4302535.741331/1‑94 (MQ=60)
GCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTC < SRR4302535.3490460/94‑1 (MQ=60)
CAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCG < SRR4302535.120242/94‑1 (MQ=60)
GCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCC < SRR4302535.3340319/94‑1 (MQ=60)
GCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCC > SRR4302535.1223280/1‑94 (MQ=60)
CACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGG > SRR4302535.3254756/1‑94 (MQ=60)
ATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGAC < SRR4302535.470224/94‑1 (MQ=60)
ATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGAC < SRR4302535.3683270/94‑1 (MQ=60)
ATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGATGCCAGCTCGATAGTGGTCGCCTGCGGAC > SRR4302535.4619207/1‑94 (MQ=60)
CTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCG > SRR4302535.4095478/1‑94 (MQ=60)
CTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCG > SRR4302535.2300071/1‑94 (MQ=60)
GGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGGTCGATAGTGGTCGCCTGCGGAACGCC > SRR4302535.800103/1‑94 (MQ=60)
GAGCAGCCCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCCCCTGCGGACCGCCC < SRR4302535.402023/94‑1 (MQ=60)
GCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCC < SRR4302535.4062518/94‑1 (MQ=60)
AGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCA > SRR4302535.3941730/1‑94 (MQ=60)
GCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAG < SRR4302535.4405126/94‑1 (MQ=60)
CACCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGC > SRR4302535.3976409/1‑94 (MQ=60)
GCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGCTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCG > SRR4302535.215953/1‑94 (MQ=60)
CCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGA > SRR4302535.2235826/1‑94 (MQ=60)
AGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATA > SRR4302535.1582626/1‑94 (MQ=60)
GCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAG < SRR4302535.4542852/94‑1 (MQ=60)
gatttgCGCGCGGGCAGGATCGTAGTCTTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGC < SRR4302535.1055537/88‑1 (MQ=60)
CATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGC > SRR4302535.2754735/1‑94 (MQ=60)
ATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCA < SRR4302535.843503/94‑1 (MQ=60)
ATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCA < SRR4302535.1455714/94‑1 (MQ=60)
TGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACG > SRR4302535.95251/1‑94 (MQ=60)
TGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACG < SRR4302535.3793252/94‑1 (MQ=60)
CGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTG > SRR4302535.2787523/1‑94 (MQ=60)
CGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTG < SRR4302535.2089120/94‑1 (MQ=60)
CGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGC < SRR4302535.4419764/94‑1 (MQ=60)
GCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCG < SRR4302535.4393313/94‑1 (MQ=60)
GGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAA < SRR4302535.3433437/94‑1 (MQ=60)
GGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAG < SRR4302535.2203035/94‑1 (MQ=60)
GGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAG < SRR4302535.2814401/94‑1 (MQ=60)
CAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCTGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCT > SRR4302535.775333/1‑94 (MQ=60)
CAGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCT < SRR4302535.1845280/94‑1 (MQ=60)
AGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTG < SRR4302535.1667705/94‑1 (MQ=60)
AGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTG > SRR4302535.2507488/1‑94 (MQ=60)
AGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTG > SRR4302535.2611975/1‑94 (MQ=60)
AGGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTG > SRR4302535.2611973/1‑94 (MQ=60)
GGATCGTAGTCGTATCTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGG < SRR4302535.1555875/94‑1 (MQ=60)
GGATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGG < SRR4302535.3302245/94‑1 (MQ=60)
GATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGC > SRR4302535.3196653/1‑94 (MQ=60)
GATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGC < SRR4302535.173511/94‑1 (MQ=60)
GATCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGC > SRR4302535.2842902/1‑94 (MQ=60)
TCGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGCGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGA > SRR4302535.133421/1‑94 (MQ=60)
CGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAA > SRR4302535.3267394/1‑94 (MQ=60)
CGTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAA > SRR4302535.1582922/1‑94 (MQ=60)
CGNANTNGNAANTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAA < SRR4302535.1575039/94‑1 (MQ=60)
GTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAGA > SRR4302535.1442455/1‑94 (MQ=60)
GTAGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAA > SRR4302535.383945/1‑94 (MQ=60)
AGTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACA > SRR4302535.3584893/1‑94 (MQ=60)
GTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAG < SRR4302535.3824690/94‑1 (MQ=60)
GTCGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAG > SRR4302535.991779/1‑94 (MQ=60)
CGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAG < SRR4302535.3787669/94‑1 (MQ=60)
CGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAG < SRR4302535.2466916/94‑1 (MQ=60)
CGTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAG > SRR4302535.3377089/1‑94 (MQ=60)
GTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGC > SRR4302535.3620511/1‑94 (MQ=60)
GTAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGC < SRR4302535.1820165/94‑1 (MQ=60)
TAACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCA < SRR4302535.3328947/94‑1 (MQ=60)
AACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCAT < SRR4302535.3457490/94‑1 (MQ=60)
AACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCAT < SRR4302535.1738807/94‑1 (MQ=60)
ACTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATA > SRR4302535.1150893/1‑94 (MQ=60)
CTCAGCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAA < SRR4302535.1289874/94‑1 (MQ=60)
GCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGAT < SRR4302535.2024671/94‑1 (MQ=60)
GCGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGAT < SRR4302535.295191/94‑1 (MQ=60)
GGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCACCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATA < SRR4302535.2292313/94‑1 (MQ=60)
CGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATA < SRR4302535.3863009/94‑1 (MQ=60)
CGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATA < SRR4302535.4546463/94‑1 (MQ=60)
CGCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATA > SRR4302535.3215652/1‑94 (MQ=60)
GCCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAA < SRR4302535.4440721/94‑1 (MQ=60)
CCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAG < SRR4302535.3933546/94‑1 (MQ=60)
CCTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAG > SRR4302535.649852/1‑94 (MQ=60)
CTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGC > SRR4302535.3819771/1‑94 (MQ=60)
CTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGC > SRR4302535.2489578/1‑94 (MQ=60)
CTGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGC > SRR4302535.1439079/1‑94 (MQ=60)
TGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCG > SRR4302535.2516552/1‑94 (MQ=60)
TGATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCG > SRR4302535.4255495/1‑94 (MQ=60)
ATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCA > SRR4302535.3544574/1‑94 (MQ=60)
ATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCA < SRR4302535.745811/94‑1 (MQ=60)
ATAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCA < SRR4302535.4173419/94‑1 (MQ=60)
ATAGGTTGCCAGCTCGATAGTGGTCGCCCGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCA < SRR4302535.2633050/94‑1 (MQ=60)
TAGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCAG < SRR4302535.1307190/94‑1 (MQ=60)
AGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGCAACAGAGCCTAAAGATAAGAGCAGC > SRR4302535.2907460/1‑94 (MQ=60)
AGGTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCAGC < SRR4302535.2219902/94‑1 (MQ=60)
GTTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCAGCAA > SRR4302535.3121019/1‑94 (MQ=60)
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CAACAGCACCAGCCCGAGGCAGCACACCATCTGGAGCAGCGCCAGCATTGCCGCGCGGGCAGGATCGTAGTCGTAACTCAGCGCCTGATAGATTGCCAGCTCGATAGTGGTCGCCTGCGGACCGCCCCCCAGCGATAGCACGGTGGCGAAGCTGGCGAAACAGAGCATAAAGATAAGCGCAGCAA > NC_000913/73742‑73926
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
