Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
76,142 |
A→G |
R386R (CGT→CGC) |
yabN ← |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 76,142 | 0 | A | G | 100.0%
| 590.7
/ NA
| 187 | R386R (CGT→CGC) | yabN | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (81/106); total (81/106) |
Only 100 of 191 total aligned reads displayed.
CCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAACGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCT > NC_000913/76052‑76231
|
ccGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCg < 2:1359112/93‑1 (MQ=255)
cGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCgg < 2:1973753/93‑1 (MQ=255)
cGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCgg > 1:2736995/1‑93 (MQ=255)
cGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCgg < 2:386975/93‑1 (MQ=255)
gATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCggg > 1:3582780/1‑93 (MQ=255)
tGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCggggg > 2:437150/1‑93 (MQ=255)
cTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAg > 1:237694/1‑93 (MQ=255)
tCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGc < 2:977231/93‑1 (MQ=255)
tCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGc > 2:1557970/1‑93 (MQ=255)
tCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGc > 1:1097370/1‑93 (MQ=255)
cACTGTGATCCTGATAAAGGTTTAGGGTGAGGTTTTCCGGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCa < 2:1887092/93‑1 (MQ=255)
cTGTAATCCTGATAAAAGGTTAGGGTGAGGCTCTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGt < 2:4237712/93‑1 (MQ=255)
tttgATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTc < 1:554841/91‑1 (MQ=255)
tgtgATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTc > 2:2237362/1‑93 (MQ=255)
gtgATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTcc < 2:2095349/93‑1 (MQ=255)
tgATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCa < 1:1885767/93‑1 (MQ=255)
gATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCAt > 2:3217575/1‑93 (MQ=255)
gATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCAt < 1:366366/93‑1 (MQ=255)
aTCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATa < 2:621016/93‑1 (MQ=255)
tCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATaa < 1:3836028/93‑1 (MQ=255)
cTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGc > 1:1210976/1‑93 (MQ=255)
cTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGc > 1:778189/1‑93 (MQ=255)
cTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGGGCCAGCGGGGGAGCAGTCCATAAGc < 2:3155375/93‑1 (MQ=255)
aTAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCgg < 1:2705767/93‑1 (MQ=255)
tAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGCGCAGTCCATAAGCCggg > 2:694100/1‑93 (MQ=255)
tAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCggg > 1:252698/1‑93 (MQ=255)
aaaGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGCTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGaa > 2:498033/1‑93 (MQ=255)
aGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCCTAAACCGGGGAcc > 1:1318735/1‑93 (MQ=255)
gTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACcac < 1:1787484/93‑1 (MQ=255)
gTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACcac > 1:1708901/1‑93 (MQ=255)
ttAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACcaca < 1:3748603/93‑1 (MQ=255)
ttAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACcaca > 1:948292/1‑93 (MQ=255)
ttAGGGTGAGGCTTTCCAGGCCAGCCGATTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACcaca < 1:4133564/93‑1 (MQ=255)
aGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGt < 2:1731251/93‑1 (MQ=255)
aGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGt < 1:722173/93‑1 (MQ=255)
ggTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTg < 2:3988089/93‑1 (MQ=255)
tGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCt > 2:2941833/1‑93 (MQ=255)
gAGGCTTTCCGGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCGGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTg < 2:2688197/93‑1 (MQ=255)
gAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTg > 1:1003510/1‑93 (MQ=255)
aGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTgg > 2:3912808/1‑93 (MQ=255)
ggCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGt < 1:2839257/93‑1 (MQ=255)
tttCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACt < 2:3533300/93‑1 (MQ=255)
ttCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTg > 2:2042338/1‑93 (MQ=255)
ttCAAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTg < 1:3943020/93‑1 (MQ=255)
tCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGt < 2:2779885/93‑1 (MQ=255)
tCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGt < 2:1827279/93‑1 (MQ=255)
cAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTc < 1:1938459/93‑1 (MQ=255)
ggCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCt > 1:3334537/1‑93 (MQ=255)
ggCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCt > 1:2803028/1‑93 (MQ=255)
ccAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCa < 2:1721542/93‑1 (MQ=255)
ccAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCa < 1:3489445/93‑1 (MQ=255)
aGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGc < 1:925322/93‑1 (MQ=255)
gCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCg > 2:4605408/1‑93 (MQ=255)
gCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCg > 1:4186177/1‑93 (MQ=255)
gCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCg > 1:2110661/1‑93 (MQ=255)
ccGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGa > 2:4119940/1‑93 (MQ=255)
ccGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGa > 1:2288525/1‑93 (MQ=255)
ggTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGaaa > 1:2150510/1‑93 (MQ=255)
gTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAAt < 1:2597443/93‑1 (MQ=255)
tttttCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATa < 2:754193/93‑1 (MQ=255)
tttttCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATa < 2:1772768/93‑1 (MQ=255)
ttttCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGCAACCCCAGTTGCTGGTACTGTTCCTCAGCGAAATAg < 1:3208772/93‑1 (MQ=255)
tttCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGa > 2:2631394/1‑93 (MQ=255)
tttCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGa > 1:4426619/1‑93 (MQ=255)
ttCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGAc < 2:3720145/93‑1 (MQ=255)
ttCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGAc < 1:1816564/93‑1 (MQ=255)
ttCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGAc < 1:1792418/93‑1 (MQ=255)
cGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCa > 2:472077/1‑93 (MQ=255)
gCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAg < 1:1029517/93‑1 (MQ=255)
gCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAg < 2:1269572/93‑1 (MQ=255)
gCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAg < 2:1434427/93‑1 (MQ=255)
ctctTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGa < 2:3599510/93‑1 (MQ=255)
tctTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGAt > 1:2922419/1‑93 (MQ=255)
tctTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGAt < 2:4453329/93‑1 (MQ=255)
tctTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGAt < 1:473239/93‑1 (MQ=255)
ctTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGAtt < 1:1125244/93‑1 (MQ=255)
tttATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTa > 2:435197/1‑93 (MQ=255)
tttATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTa > 2:341501/1‑93 (MQ=255)
tttAAGGTGCGGGCATGGTGCCGGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTa > 1:1686099/1‑93 (MQ=255)
tATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGt < 2:1461252/93‑1 (MQ=255)
aTGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGtt < 1:143634/93‑1 (MQ=255)
aTGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGtt < 1:1573227/93‑1 (MQ=255)
aTGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGtt < 2:3564102/93‑1 (MQ=255)
tGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTg > 1:989409/1‑93 (MQ=255)
ggTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTgg > 2:1536588/1‑93 (MQ=255)
gTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGga < 1:3473572/93‑1 (MQ=255)
gTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGga < 2:1078149/93‑1 (MQ=255)
gCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGgaga < 1:3976795/93‑1 (MQ=255)
gggCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGaaa < 1:4287041/93‑1 (MQ=255)
gggCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGaaa > 1:612111/1‑93 (MQ=255)
aTGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGcac > 2:3024341/1‑93 (MQ=255)
aTGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGcac > 1:3038906/1‑93 (MQ=255)
aTGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGcac < 2:2534570/93‑1 (MQ=255)
tGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGcaca > 1:4633650/1‑93 (MQ=255)
tGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGcaca > 2:580911/1‑93 (MQ=255)
tgTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACAt < 2:525145/92‑1 (MQ=255)
gTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATa < 1:1384299/93‑1 (MQ=255)
gTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATa < 1:3381197/93‑1 (MQ=255)
tGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAg > 2:4188919/1‑93 (MQ=255)
ccAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCt > 1:477889/1‑93 (MQ=255)
|
CCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAACGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCT > NC_000913/76052‑76231
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAACGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCTTACC > NC_000913/76051‑76235
|
CCCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCG < SRR4302535.3969020/94‑1 (MQ=60)
CCCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCG < SRR4302535.2440027/94‑1 (MQ=60)
CCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGG > SRR4302535.2756517/1‑94 (MQ=60)
CCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGG > SRR4302535.563611/1‑94 (MQ=60)
CGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGG > SRR4302535.3607631/1‑94 (MQ=60)
GATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGG < SRR4302535.248620/94‑1 (MQ=60)
GCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAG > SRR4302535.239329/1‑94 (MQ=60)
CTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTCTGGTGCGGGCATGGTGCCGGCGGGGGGGC > SRR4302535.3511058/1‑94 (MQ=60)
CTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGC > SRR4302535.1105182/1‑94 (MQ=60)
TCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCA > SRR4302535.4395991/1‑94 (MQ=60)
CACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAG > SRR4302535.3340877/1‑94 (MQ=60)
TTTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCC < SRR4302535.558730/94‑1 (MQ=60)
TGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCC < SRR4302535.1992560/94‑1 (MQ=60)
TGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCC > SRR4302535.76465/1‑94 (MQ=60)
TGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCC > SRR4302535.1240927/1‑94 (MQ=60)
TGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCAT < SRR4302535.1899353/94‑1 (MQ=60)
GATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATA < SRR4302535.368890/94‑1 (MQ=60)
ATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAA > SRR4302535.558053/1‑94 (MQ=60)
TCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAG < SRR4302535.3862478/94‑1 (MQ=60)
CCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGC > SRR4302535.783656/1‑94 (MQ=60)
CCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGC > SRR4302535.1815428/1‑94 (MQ=60)
CCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGC > SRR4302535.1219672/1‑94 (MQ=60)
CTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCC > SRR4302535.1676452/1‑94 (MQ=60)
CTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCC > SRR4302535.3692002/1‑94 (MQ=60)
TGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGGTTTTCGCTCTTTATGGTGCGGGCATGCTGCCAGCGGGGGAGCAGTCCATAAGCCG > SRR4302535.1209159/1‑94 (MQ=60)
GATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGG > SRR4302535.3487120/1‑94 (MQ=60)
ATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGG < SRR4302535.2725103/94‑1 (MQ=60)
ATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGG > SRR4302535.254440/1‑94 (MQ=60)
ATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGG < SRR4302535.2337757/94‑1 (MQ=60)
TAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGA > SRR4302535.190085/1‑94 (MQ=60)
TAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGA > SRR4302535.3007591/1‑94 (MQ=60)
AAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAA > SRR4302535.658764/1‑94 (MQ=60)
AAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAA < SRR4302535.808885/94‑1 (MQ=60)
AAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAA < SRR4302535.4136892/94‑1 (MQ=60)
AAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAAC > SRR4302535.935383/1‑94 (MQ=60)
AAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCCTAAACCGGGGACC > SRR4302535.1328163/1‑94 (MQ=60)
AGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCA < SRR4302535.2165432/94‑1 (MQ=60)
GGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCAC > SRR4302535.1721255/1‑94 (MQ=60)
GGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCAC > SRR4302535.3792886/1‑94 (MQ=60)
GGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCAC > SRR4302535.4216258/1‑94 (MQ=60)
GTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACA > SRR4302535.955012/1‑94 (MQ=60)
GTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACA < SRR4302535.1800412/94‑1 (MQ=60)
TTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAG < SRR4302535.3774538/94‑1 (MQ=60)
TTAGGGTGAGGCTTTCCAGGCCAGCCGATTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAG < SRR4302535.4161860/94‑1 (MQ=60)
AGGGTGAGTCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTT < SRR4302535.1057092/94‑1 (MQ=60)
AGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTT < SRR4302535.727245/94‑1 (MQ=60)
gttacattttctAGGCCAGCCGGTTTTTCGCTTTTTATGCTGCGGCCATGGTGCTAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCT < SRR4302535.4347907/82‑1 (MQ=60)
TGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTG > SRR4302535.1010634/1‑94 (MQ=60)
GAGGCTTTCCAGGCCAGCTGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGG < SRR4302535.4170938/94‑1 (MQ=60)
GGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTA < SRR4302535.2859397/94‑1 (MQ=60)
TTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGT > SRR4302535.1706308/1‑94 (MQ=60)
TTCAAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGT < SRR4302535.3969938/94‑1 (MQ=60)
tccggcccagcggttttttcgttcttaaggttccgggctgGGTGCCAGCGGGGGACCAGT‑CATTAGCCGGGAACCACAGTTGCTGGTACTGTTC < SRR4302535.300183/54‑1 (MQ=31)
CAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCC < SRR4302535.1952416/94‑1 (MQ=60)
AGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGCGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCT > SRR4302535.1416303/1‑94 (MQ=60)
AGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCT > SRR4302535.2822962/1‑94 (MQ=60)
AGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCT > SRR4302535.3357763/1‑94 (MQ=60)
CCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAG < SRR4302535.3513690/94‑1 (MQ=60)
AGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCG > SRR4302535.2125886/1‑94 (MQ=60)
AGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCG > SRR4302535.4214829/1‑94 (MQ=60)
AGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCG < SRR4302535.931877/94‑1 (MQ=60)
GCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGA > SRR4302535.2304872/1‑94 (MQ=60)
CGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAA > SRR4302535.2165974/1‑94 (MQ=60)
GGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAAT < SRR4302535.2783707/94‑1 (MQ=60)
GTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATA < SRR4302535.1791894/94‑1 (MQ=60)
GTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATA < SRR4302535.2616098/94‑1 (MQ=60)
GTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCAGAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATA > SRR4302535.189105/1‑94 (MQ=60)
TTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGA < SRR4302535.3546265/94‑1 (MQ=60)
TTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGA > SRR4302535.4456940/1‑94 (MQ=60)
TTTTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGCAACCCCAGTTGCTGGTACTGTTCCTCAGCGAAATAGA < SRR4302535.3230997/94‑1 (MQ=60)
TTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACC < SRR4302535.1829694/94‑1 (MQ=60)
TTCGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACC < SRR4302535.1805377/94‑1 (MQ=60)
TGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAG < SRR4302535.2247611/94‑1 (MQ=60)
CGCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAG < SRR4302535.1350686/94‑1 (MQ=60)
GCTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGA < SRR4302535.1036824/94‑1 (MQ=60)
CTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGAT > SRR4302535.3970689/1‑94 (MQ=60)
CTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGAT > SRR4302535.2572523/1‑94 (MQ=60)
CTCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGAT > SRR4302535.2943030/1‑94 (MQ=60)
TCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATT < SRR4302535.3954956/94‑1 (MQ=60)
TCTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATT < SRR4302535.476550/94‑1 (MQ=60)
CTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTA < SRR4302535.1133277/94‑1 (MQ=60)
CTTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTA > SRR4302535.2884348/1‑94 (MQ=60)
CTTTAAGGTGCGGGCATGGTGCCGGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTA > SRR4302535.1698306/1‑94 (MQ=60)
TTTATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTAATGTTCCTCAGCGCAATAAACCATACTAG > SRR4302535.3368107/1‑94 (MQ=60)
ATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTG > SRR4302535.996435/1‑94 (MQ=60)
ATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTG < SRR4302535.144633/94‑1 (MQ=60)
ATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTG < SRR4302535.1584584/94‑1 (MQ=60)
ATGGTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTG < SRR4302535.2843409/94‑1 (MQ=60)
GTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAG < SRR4302535.3497707/94‑1 (MQ=60)
GTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAG < SRR4302535.1575929/94‑1 (MQ=60)
GTGCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAG > SRR4302535.2639706/1‑94 (MQ=60)
GCGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAA < SRR4302535.4003965/94‑1 (MQ=60)
CGGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAA > SRR4302535.616371/1‑94 (MQ=60)
GGGCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAG < SRR4302535.4316367/94‑1 (MQ=60)
GCATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCA < SRR4302535.3085065/94‑1 (MQ=60)
CATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCAC > SRR4302535.3060189/1‑94 (MQ=60)
CATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCAA > SRR4302535.955279/1‑94 (MQ=60)
ATGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACA > SRR4302535.4665083/1‑94 (MQ=60)
TGGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACAT < SRR4302535.46634/94‑1 (MQ=60)
GGTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATA < SRR4302535.4708919/94‑1 (MQ=60)
GTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAG < SRR4302535.3404703/94‑1 (MQ=60)
GTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAG < SRR4302535.1394181/94‑1 (MQ=60)
GTGCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAG > SRR4302535.1112547/1‑94 (MQ=60)
GCCAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCT > SRR4302535.481240/1‑94 (MQ=60)
CAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCTTA > SRR4302535.2103359/1‑94 (MQ=60)
CAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCTTA > SRR4302535.98423/1‑94 (MQ=60)
CAGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCTTA > SRR4302535.2694093/1‑94 (MQ=60)
AGCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCTTAC < SRR4302535.3437629/94‑1 (MQ=60)
GCGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCTTACC < SRR4302535.1242044/94‑1 (MQ=60)
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CCCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGCCAGCCGGTTTTTCGCTCTTTATGGTGCGGGCATGGTGCCAACGGGGGAGCAGTCCATAAGCCGGGAACCACAGTTGCTGGTACTGTTCCTCAGCGAAATAGACCAGATTAGTTGGAGAAAGCACATAGCTTACC > NC_000913/76051‑76235
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
