Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,877,746 |
A→G |
V76A (GTG→GCG) |
yeaR ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,877,746 | 0 | A | G | 100.0%
| 370.0
/ NA
| 120 | V76A (GTG→GCG) | yeaR | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (56/64); total (56/64) |
Only 100 of 127 total aligned reads displayed.
ATCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCAT > NC_000913/1877656‑1877833
|
aTCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGcc > 1:1071553/1‑93 (MQ=255)
aTCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGcc < 1:1797544/93‑1 (MQ=255)
tCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGGCACTTTTCTGGAGGGCACGCCg > 2:14358/1‑93 (MQ=255)
tCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCg > 2:1958242/1‑93 (MQ=255)
tCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCg > 2:500344/1‑93 (MQ=255)
tCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCg > 2:4549601/1‑93 (MQ=255)
cAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAAcgccgc < 1:246937/93‑1 (MQ=255)
ggACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTTGAGGGAACGCCGCaa > 2:330654/1‑93 (MQ=255)
ggACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCaa < 2:834891/93‑1 (MQ=255)
gACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCaaa > 2:445979/1‑93 (MQ=255)
gACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCaaa > 2:191368/1‑93 (MQ=255)
gACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCaaa < 1:786057/93‑1 (MQ=255)
gACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCaaa < 1:4660268/93‑1 (MQ=255)
gcTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAAc < 2:3298367/92‑1 (MQ=255)
aCTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAAc < 1:531242/93‑1 (MQ=255)
cAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGcc < 1:3483292/93‑1 (MQ=255)
aGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGccc < 2:3013857/93‑1 (MQ=255)
aGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGccc < 1:331363/93‑1 (MQ=255)
aGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGccc < 1:1015790/93‑1 (MQ=255)
aGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGc < 1:3498309/93‑1 (MQ=255)
gCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCt > 1:2171037/1‑93 (MQ=255)
gCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCt > 1:1151996/1‑93 (MQ=255)
gCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCt > 2:4587093/1‑93 (MQ=255)
cGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGa < 2:228297/93‑1 (MQ=255)
cGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGGGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGa > 1:2815744/1‑93 (MQ=255)
gaagaaGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGAt > 2:2531867/1‑93 (MQ=255)
aagaagTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATa > 2:19472/1‑93 (MQ=255)
gaagTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAg > 1:1272007/1‑93 (MQ=255)
agTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGa < 1:2036550/93‑1 (MQ=255)
gTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGAt > 1:193254/1‑93 (MQ=255)
gTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGAt < 1:2654056/93‑1 (MQ=255)
gTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGAt < 1:3655928/93‑1 (MQ=255)
gTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGAt < 1:3710255/93‑1 (MQ=255)
gTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGAt < 1:1040346/93‑1 (MQ=255)
tCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATc < 2:3945463/93‑1 (MQ=255)
cAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCa > 1:17060/1‑93 (MQ=255)
aaTGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCAc > 2:1581568/1‑93 (MQ=255)
aaTGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCAc > 2:4022232/1‑93 (MQ=255)
aTGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCAcc > 2:2556661/1‑93 (MQ=255)
tGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAAATGCCCCGCTTCGGTAAGGATCACCt > 2:4319536/1‑93 (MQ=255)
gTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTg > 1:4013337/1‑93 (MQ=255)
ttGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGa < 2:4047052/93‑1 (MQ=255)
aaTAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAg < 2:1432416/93‑1 (MQ=255)
aTAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGCACGGCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAgg > 2:2103245/1‑93 (MQ=255)
aTAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGGTAAGGATCACCTGATCAgg < 2:4561920/93‑1 (MQ=255)
aGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGctc < 2:4473051/93‑1 (MQ=255)
aGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGctc < 2:4105483/93‑1 (MQ=255)
aGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGctc < 2:380733/93‑1 (MQ=255)
gTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGctct < 2:2335447/93‑1 (MQ=255)
gTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGctct > 2:3686984/1‑93 (MQ=255)
tATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTg < 2:4060060/93‑1 (MQ=255)
aTCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGc < 2:4638381/93‑1 (MQ=255)
tCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGCACGCCGCAAACTGCCCCGCTTCGCTAAGGATCACCTGATCAGGctctccc > 1:4182874/1‑90 (MQ=255)
tCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGct < 1:4335412/93‑2 (MQ=255)
tCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGcc > 2:3781345/1‑92 (MQ=255)
tCGACAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCa > 2:2996085/1‑93 (MQ=255)
gtcagtcaTGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCAcc > 1:2422974/1‑92 (MQ=255)
cagtcaTGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACcgt > 2:2205745/1‑93 (MQ=255)
cagtcaTGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACcgt < 2:3955370/93‑1 (MQ=255)
agtcaTGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACcgtg < 1:459820/93‑1 (MQ=255)
gtcaTGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCgtgt > 1:940866/1‑93 (MQ=255)
gtcaTGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCgtgt < 1:4045525/93‑1 (MQ=255)
aTGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTtca > 2:2023714/1‑93 (MQ=255)
aTGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTtca > 1:367367/1‑93 (MQ=255)
tGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGCTAAGGATCACCTGATCAGGCTCTGCACCGTGTtcat > 1:2842380/1‑93 (MQ=255)
tGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTtcat > 2:129337/1‑93 (MQ=255)
tGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTtcat > 1:2749479/1‑93 (MQ=255)
gtcTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTtcatc < 1:3274723/91‑1 (MQ=255)
ggCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTtcatc < 1:2164199/93‑1 (MQ=255)
cTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAg < 2:4385405/93‑1 (MQ=255)
cTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAg < 1:1339233/93‑1 (MQ=255)
cTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAg > 1:4473390/1‑93 (MQ=255)
cTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAg < 1:3462485/93‑1 (MQ=255)
cTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAg > 1:3326461/1‑93 (MQ=255)
ttCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGc > 1:3835765/1‑93 (MQ=255)
tCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCg > 2:1415000/1‑93 (MQ=255)
tCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCg > 2:2689952/1‑93 (MQ=255)
cAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGt < 2:53930/93‑1 (MQ=255)
cAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGt > 1:3012442/1‑93 (MQ=255)
aaTGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTa > 1:2901012/1‑93 (MQ=255)
aaTGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTa < 2:855853/93‑1 (MQ=255)
aTGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAg < 1:481108/93‑1 (MQ=255)
tgttgtGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGc > 2:2765901/1‑93 (MQ=255)
tgttgtGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGc > 1:1337374/1‑93 (MQ=255)
tgtgCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCga < 1:2849897/93‑1 (MQ=255)
tgtgCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCga < 1:1706661/93‑1 (MQ=255)
gtgCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCgag > 1:373332/1‑93 (MQ=255)
tgCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCgaga < 1:3293318/93‑1 (MQ=255)
ccACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGata < 1:854314/93‑1 (MQ=255)
ccACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGata < 2:3522901/93‑1 (MQ=255)
ccACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGata < 2:2081676/93‑1 (MQ=255)
ccACTTGTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGata < 2:4379252/93‑1 (MQ=255)
aCTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATAtt < 2:3867157/93‑1 (MQ=255)
cTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATAttt < 1:521819/93‑1 (MQ=255)
ttttCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTg > 2:881702/1‑93 (MQ=255)
ttCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGAc < 1:45161/93‑1 (MQ=255)
ttCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGAc < 1:2453400/93‑1 (MQ=255)
aGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGACCGcccc > 1:3384726/1‑93 (MQ=255)
gggAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCa > 2:2364597/1‑93 (MQ=255)
ggAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCAt < 1:1118607/93‑1 (MQ=255)
|
ATCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCAT > NC_000913/1877656‑1877833
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCATCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATA > NC_000913/1877654‑1877838
|
CCATCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTTAATGTTGTGCCACTTTTCTCGAGGGAACGC > SRR4302535.1678397/1‑94 (MQ=60)
CCATCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGC > SRR4302535.3095532/1‑94 (MQ=60)
CATCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCC > SRR4302535.1079167/1‑94 (MQ=60)
CATCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCC < SRR4302535.1604133/94‑1 (MQ=60)
ATCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCG < SRR4302535.1810538/94‑1 (MQ=60)
CAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCA < SRR4302535.248629/94‑1 (MQ=60)
GACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAAC < SRR4302535.791566/94‑1 (MQ=60)
GACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAAC < SRR4302535.4691788/94‑1 (MQ=60)
GACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAAC < SRR4302535.2003305/94‑1 (MQ=60)
ACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACT < SRR4302535.534960/94‑1 (MQ=60)
CAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCC < SRR4302535.3507479/94‑1 (MQ=60)
AGGAGCCACGAAGAAGTCAATGTTGGAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAAGGCCGCAAACTGCCCC > SRR4302535.4281540/1‑94 (MQ=60)
AGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCC < SRR4302535.333659/94‑1 (MQ=60)
AGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCC < SRR4302535.1023012/94‑1 (MQ=60)
AGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCT > SRR4302535.2186577/1‑94 (MQ=60)
AGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCT < SRR4302535.3522618/94‑1 (MQ=60)
AGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCT > SRR4302535.1160224/1‑94 (MQ=60)
AGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCT > SRR4302535.642044/1‑94 (MQ=60)
ACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGGGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGA > SRR4302535.2835745/1‑94 (MQ=60)
AGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAG > SRR4302535.1281098/1‑94 (MQ=60)
AGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCTGCTTCGATAAGGAT > SRR4302535.3442377/1‑94 (MQ=60)
AGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGAT < SRR4302535.2051217/94‑1 (MQ=60)
AGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGAT > SRR4302535.194585/1‑94 (MQ=60)
GTCAATGTTGAAATAAGTATCGTCAGTCATTGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATC > SRR4302535.1127314/1‑94 (MQ=60)
GTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATC < SRR4302535.1047725/94‑1 (MQ=60)
GTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATC < SRR4302535.3681235/94‑1 (MQ=60)
GTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATC < SRR4302535.3735953/94‑1 (MQ=60)
GTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATC < SRR4302535.2673070/94‑1 (MQ=60)
GTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATC > SRR4302535.4666514/1‑94 (MQ=60)
TCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCA > SRR4302535.17187/1‑94 (MQ=60)
TGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTG > SRR4302535.4040790/1‑94 (MQ=60)
TTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGAT < SRR4302535.4000401/94‑1 (MQ=60)
TGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCTATAAGGATCACCTGATC < SRR4302535.3304747/94‑1 (MQ=60)
ATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGCACGCCGCAAACTGCCCCGCTTCGCTAAGGATCACCTGATCAGGCTCTccc > SRR4302535.4211495/1‑91 (MQ=60)
TCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCTC < SRR4302535.4365064/94‑1 (MQ=60)
CGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACC > SRR4302535.2440429/1‑94 (MQ=60)
AGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGT < SRR4302535.463033/94‑1 (MQ=60)
AGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGT > SRR4302535.947526/1‑94 (MQ=60)
GTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTT > SRR4302535.1662298/1‑94 (MQ=60)
GTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTT < SRR4302535.4073219/94‑1 (MQ=60)
CATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCA > SRR4302535.369903/1‑94 (MQ=60)
ATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGCTAAGGATCACCTGATCAGGCTCTGCACCGTGTTCAT > SRR4302535.2862537/1‑94 (MQ=60)
ATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCAT > SRR4302535.2769080/1‑94 (MQ=60)
GTCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCA < SRR4302535.3297468/94‑1 (MQ=60)
GGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCA < SRR4302535.2179722/94‑1 (MQ=60)
GCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAG > SRR4302535.3349608/1‑94 (MQ=60)
GCTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAG > SRR4302535.4504087/1‑94 (MQ=60)
CTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGC < SRR4302535.1348788/94‑1 (MQ=60)
CTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGC > SRR4302535.3862215/1‑94 (MQ=60)
CTTCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGC < SRR4302535.3486554/94‑1 (MQ=60)
TCAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGT > SRR4302535.3033549/1‑94 (MQ=60)
CAATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTA > SRR4302535.2921517/1‑94 (MQ=60)
ATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGC < SRR4302535.484481/94‑1 (MQ=60)
ATGTTGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGC > SRR4302535.1346916/1‑94 (MQ=60)
TGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAG < SRR4302535.2870087/94‑1 (MQ=60)
TGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAG < SRR4302535.1718997/94‑1 (MQ=60)
TGTGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAG > SRR4302535.375916/1‑94 (MQ=60)
TGCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGAT < SRR4302535.3316215/94‑1 (MQ=60)
GCCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATA < SRR4302535.29178/94‑1 (MQ=60)
CCACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATAT < SRR4302535.860334/94‑1 (MQ=60)
CACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATT < SRR4302535.2691233/94‑1 (MQ=60)
ACTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTT < SRR4302535.3688502/94‑1 (MQ=60)
CTTTTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTG < SRR4302535.525470/94‑1 (MQ=60)
TTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGACC < SRR4302535.2471085/94‑1 (MQ=60)
TTCTGGAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGACC < SRR4302535.45503/94‑1 (MQ=60)
GAGGGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCC > SRR4302535.3408277/1‑94 (MQ=60)
GGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATG < SRR4302535.1126587/94‑1 (MQ=60)
GGAACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATG < SRR4302535.2348215/94‑1 (MQ=60)
ACGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCAACGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCAT < SRR4302535.2526122/94‑1 (MQ=60)
CGCCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACCGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATA < SRR4302535.4116939/94‑1 (MQ=60)
|
CCATCAGGACTTCAGGAGCCACGAAGAAGTCAATGTTGAAATAAGTATCGTCAGTCATGGCTTCAATGTTGTGCCACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATA > NC_000913/1877654‑1877838
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
