Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,073,511 |
A→G |
L231P (CTG→CCG) |
yggF ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,073,511 | 0 | A | G | 100.0%
| 678.1
/ NA
| 217 | L231P (CTG→CCG) | yggF | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (129/88); total (129/88) |
Only 100 of 227 total aligned reads displayed.
TCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCAGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACATCG > NC_000913/3073421‑3073600
|
tCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGc > 1:2901086/1‑93 (MQ=255)
cAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCt < 2:1230802/93‑1 (MQ=255)
aaCGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTc > 2:2535157/1‑93 (MQ=255)
gCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAAtcggctcggc > 1:1167034/1‑93 (MQ=255)
ccATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCt < 1:807337/93‑1 (MQ=255)
ccATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCt < 2:2305476/93‑1 (MQ=255)
ccATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCCTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGGCt > 2:1481513/1‑93 (MQ=255)
cATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTg > 2:1655409/1‑93 (MQ=255)
cATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTg > 2:22224/1‑93 (MQ=255)
cATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTg > 2:2888976/1‑93 (MQ=255)
aTTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGc > 1:343756/1‑93 (MQ=255)
ttGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCa < 2:4451167/93‑1 (MQ=255)
tGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCat > 1:945620/1‑93 (MQ=255)
tGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCat > 1:365706/1‑93 (MQ=255)
gCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCata < 2:1713925/93‑1 (MQ=255)
cTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGCTTTTCCGTGTAATCCCCTTTAGCCTGTCAAAAGTCAATCGGATCGGCCTGCataaa > 2:2671739/1‑91 (MQ=255)
cTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATc < 1:1888258/93‑1 (MQ=255)
cTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATc > 2:1208186/1‑93 (MQ=255)
cTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATc < 1:2079275/93‑1 (MQ=255)
ttGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATcc > 1:712209/1‑93 (MQ=255)
ttGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATcc > 1:2025222/1‑93 (MQ=255)
ttGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATcc > 2:1548934/1‑93 (MQ=255)
tGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATccc < 1:2431220/93‑1 (MQ=255)
tGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATccc > 2:3732258/1‑93 (MQ=255)
gCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATcccc < 2:3588868/93‑1 (MQ=255)
aCGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGcc > 2:1272738/1‑93 (MQ=255)
aCGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGcc < 1:460793/93‑1 (MQ=255)
cGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCt > 2:3660424/1‑93 (MQ=255)
cGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCt > 1:461281/1‑93 (MQ=255)
gCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCCCCTa > 2:4054226/1‑93 (MQ=255)
cTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTaa > 2:487190/1‑93 (MQ=255)
cTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTaa > 1:3122338/1‑93 (MQ=255)
ttGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAAt < 2:643304/93‑1 (MQ=255)
cgcTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCTTGCATATCCCCGCCTAATGCt < 2:2983069/93‑1 (MQ=255)
gcTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTGGCGTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCtt < 1:3196378/93‑1 (MQ=255)
tCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTa > 2:4343426/1‑93 (MQ=255)
ccTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTaa < 1:4479042/93‑1 (MQ=255)
ccTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTaa > 1:2559230/1‑93 (MQ=255)
cTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAAc < 2:1007372/93‑1 (MQ=255)
ctctGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGc < 2:87401/93‑1 (MQ=255)
ctctGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGc < 2:3007225/93‑1 (MQ=255)
tctGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGcc > 1:2384677/1‑92 (MQ=255)
tctGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGca > 2:1471269/1‑93 (MQ=255)
ctGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGcac < 1:1942604/93‑1 (MQ=255)
ctGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTAAATCGGCTCGGCCTCCAGATCCCCCCCTCATGCTTTTACGGgac > 1:4202890/1‑93 (MQ=255)
gCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCCGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAg > 1:4329660/1‑93 (MQ=255)
cAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAgg < 2:4278683/93‑1 (MQ=255)
aaTCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGc > 2:4596547/1‑93 (MQ=255)
aaTCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGc > 1:2523735/1‑93 (MQ=255)
aTCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCa < 2:4251552/93‑1 (MQ=255)
aTCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCa > 2:4472509/1‑93 (MQ=255)
gCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGaaa > 2:1430304/1‑93 (MQ=255)
ccGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAAt < 1:2884487/93‑1 (MQ=255)
ccGAGTTGCCGTGTAATCCCCTTTAGCTTGGGAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAAt < 2:1315571/93‑1 (MQ=255)
cGATTTTCCGTGTAATCCCCTTTATCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATc < 2:753458/93‑1 (MQ=255)
cGATTTTCCGTGTAATCCCCTTTATCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATc < 2:3858723/93‑1 (MQ=255)
cGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATc < 2:3739607/93‑1 (MQ=255)
gATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCa > 2:1002780/1‑93 (MQ=255)
atgttCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCAc < 2:4273866/90‑1 (MQ=255)
aTTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGCAAtacc > 1:38442/1‑90 (MQ=255)
aTTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCAc < 2:3203877/93‑1 (MQ=255)
aTTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCAc < 1:2749868/93‑1 (MQ=255)
aTTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCAc < 2:1920529/93‑1 (MQ=255)
ttttCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATCATTTAACGGCACAGGCAGAAATCACg > 2:3258315/1‑93 (MQ=255)
tttCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGc < 2:3982297/93‑1 (MQ=255)
tttCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGc < 2:1766103/93‑1 (MQ=255)
tttCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGc > 1:37390/1‑93 (MQ=255)
tttCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGc < 1:2805604/93‑1 (MQ=255)
tCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCt > 2:469845/1‑93 (MQ=255)
cGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTc < 1:4261476/93‑1 (MQ=255)
cGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTc < 2:2421188/93‑1 (MQ=255)
cGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTc < 1:1063651/93‑1 (MQ=255)
gtgtAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCt > 2:303902/1‑93 (MQ=255)
gtgtAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCt > 1:667077/1‑93 (MQ=255)
gtgtAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCt > 1:3102858/1‑93 (MQ=255)
gtAATCCCCTTTAGGCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTgg < 1:157724/93‑1 (MQ=255)
tAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGgc > 1:3046512/1‑93 (MQ=255)
tAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGgc > 1:3499329/1‑93 (MQ=255)
tCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCa < 2:4643383/93‑1 (MQ=255)
cccTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATTCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCAcc > 2:2177154/1‑93 (MQ=255)
cccTTTAGACTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCAcc > 2:4568349/1‑93 (MQ=255)
cTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCAccgc > 2:2721644/1‑93 (MQ=255)
cTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCAccgc > 1:1296852/1‑93 (MQ=255)
cTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCAccgc < 2:3386537/93‑1 (MQ=255)
tttAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCAtcgcc > 2:1998366/1‑93 (MQ=255)
tttAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCAccgcc > 1:2163128/1‑93 (MQ=255)
tttAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCAccgcc > 2:1089842/1‑93 (MQ=255)
ttAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCAccgccg > 1:589827/1‑93 (MQ=255)
tacccTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGa < 1:4678564/90‑1 (MQ=255)
tAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGa > 1:3341208/1‑93 (MQ=255)
gCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAAAGGCACAGGCAGAAATCACGACTTCTGGCGCACCGCCGATg > 2:1718451/1‑93 (MQ=255)
ccTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATgg < 2:211654/93‑1 (MQ=255)
cTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGgt > 2:3184993/1‑93 (MQ=255)
tGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGgtg > 2:1378645/1‑93 (MQ=255)
gCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTa > 2:1146155/1‑93 (MQ=255)
aaGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTacatc < 1:2342086/93‑1 (MQ=255)
aGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGTGCACCGCCGATGGTGTacatca > 2:1970529/1‑93 (MQ=255)
aGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTacatca < 1:918430/93‑1 (MQ=255)
tCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTacatcaca > 1:1281544/1‑93 (MQ=255)
aaTCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTacatcacatc > 1:3576500/1‑93 (MQ=255)
|
TCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCAGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACATCG > NC_000913/3073421‑3073600
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGTCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCAGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACATCGTAAG > NC_000913/3073418‑3073604
|
ACGTCAGCGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTGTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCG < SRR4302535.2222866/94‑1 (MQ=60)
ACGTCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCG > SRR4302535.4699118/1‑94 (MQ=60)
ACGTCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCG < SRR4302535.3371313/94‑1 (MQ=60)
CGTCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTATCCTGGCAAAAGTCAATCGG < SRR4302535.4565488/94‑1 (MQ=60)
CGTCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGG > SRR4302535.2057832/1‑94 (MQ=60)
GTCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGC > SRR4302535.2921592/1‑94 (MQ=60)
GTCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGC > SRR4302535.3260639/1‑94 (MQ=60)
CAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTC > SRR4302535.2932548/1‑94 (MQ=60)
AACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCG > SRR4302535.658802/1‑94 (MQ=60)
CGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGC > SRR4302535.1175366/1‑94 (MQ=60)
CCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTG < SRR4302535.812996/94‑1 (MQ=60)
CATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGC > SRR4302535.346131/1‑94 (MQ=60)
TTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCAT > SRR4302535.952316/1‑94 (MQ=60)
TTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCAT > SRR4302535.368221/1‑94 (MQ=60)
TGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATAGGCTCGGCCTGCATA > SRR4302535.750617/1‑94 (MQ=60)
CTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCC < SRR4302535.1901858/94‑1 (MQ=60)
CTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCC > SRR4302535.717209/1‑94 (MQ=60)
CTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCC > SRR4302535.2039817/1‑94 (MQ=60)
CTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCC < SRR4302535.2094253/94‑1 (MQ=60)
TTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCC > SRR4302535.3779264/1‑94 (MQ=60)
TGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCC > SRR4302535.2921179/1‑94 (MQ=60)
TGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCC < SRR4302535.2448735/94‑1 (MQ=60)
CAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGC > SRR4302535.3488049/1‑94 (MQ=60)
CAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGC > SRR4302535.3126435/1‑94 (MQ=60)
CAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGACTCGGCCTGCATATCCCCTC > SRR4302535.2521587/1‑94 (MQ=60)
ACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCT < SRR4302535.464013/94‑1 (MQ=60)
ACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCT > SRR4302535.464505/1‑94 (MQ=60)
GCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAA > SRR4302535.3144083/1‑94 (MQ=60)
GCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCT < SRR4302535.464137/94‑1 (MQ=60)
CGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTT < SRR4302535.3719259/94‑1 (MQ=60)
CGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTT > SRR4302535.3942107/1‑94 (MQ=60)
GCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTGGCGTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTT < SRR4302535.3218497/94‑1 (MQ=60)
GCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCGAATGCTTT > SRR4302535.1410625/1‑94 (MQ=60)
CTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTA < SRR4302535.63291/94‑1 (MQ=60)
TCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAA > SRR4302535.2577652/1‑94 (MQ=60)
CCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAAC > SRR4302535.2626533/1‑94 (MQ=60)
CCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAAC < SRR4302535.4509793/94‑1 (MQ=60)
CTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACG > SRR4302535.2574546/1‑94 (MQ=60)
CTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACG < SRR4302535.2087555/94‑1 (MQ=60)
CTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACG > SRR4302535.3087/1‑94 (MQ=60)
GCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATACCCGCCTAATGCTTTAACGGC > SRR4302535.1929752/1‑94 (MQ=60)
CTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCC > SRR4302535.2401803/1‑94 (MQ=60)
CTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCA < SRR4302535.2381734/94‑1 (MQ=60)
TCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTAAATCGGCTCGGCCTCCAGATCCCCCCCTCATGCTTTTACGGGAC > SRR4302535.4231651/1‑94 (MQ=60)
CTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACA > SRR4302535.4272897/1‑94 (MQ=60)
CTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACA < SRR4302535.1956595/94‑1 (MQ=60)
TGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCCGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAG > SRR4302535.4359268/1‑94 (MQ=60)
CGCAAGCTGCCGATTTTCCGTGTAATCCCCTTTATCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAG < SRR4302535.1302318/94‑1 (MQ=60)
GCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGG > SRR4302535.2069127/1‑94 (MQ=60)
GCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGG > SRR4302535.2443160/1‑94 (MQ=60)
CAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGC > SRR4302535.2541922/1‑94 (MQ=60)
AATCTGCCGATTTTCCGTGTAATCCCCGTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATAGCCCCGCCTAATGCTTTAACGGCACAGGCA < SRR4302535.3613624/94‑1 (MQ=60)
ATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAG > SRR4302535.336628/1‑94 (MQ=60)
CTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAA < SRR4302535.2163637/94‑1 (MQ=60)
TGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAA > SRR4302535.1482107/1‑94 (MQ=60)
CCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATC < SRR4302535.2904897/94‑1 (MQ=60)
CCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATC > SRR4302535.3197727/1‑94 (MQ=60)
GATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGcaatacc > SRR4302535.38738/1‑87 (MQ=60)
ATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACG < SRR4302535.2769472/94‑1 (MQ=60)
TTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGC > SRR4302535.37678/1‑94 (MQ=60)
TTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCC < SRR4302535.2825551/94‑1 (MQ=60)
TTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCT < SRR4302535.2773688/94‑1 (MQ=60)
CCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTC > SRR4302535.92323/1‑94 (MQ=60)
CCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTC > SRR4302535.3543264/1‑94 (MQ=60)
CGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCT < SRR4302535.4290663/94‑1 (MQ=60)
CGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCT > SRR4302535.4116642/1‑94 (MQ=60)
CGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCT > SRR4302535.671728/1‑94 (MQ=60)
CGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCT < SRR4302535.1071219/94‑1 (MQ=60)
CGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCT > SRR4302535.3124459/1‑94 (MQ=60)
GTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTG > SRR4302535.3284391/1‑94 (MQ=60)
TGTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGG < SRR4302535.3553939/94‑1 (MQ=60)
GTAATCCCCTTTAGGCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGC < SRR4302535.158838/94‑1 (MQ=60)
GTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGC > SRR4302535.4553519/1‑94 (MQ=60)
GTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGC < SRR4302535.4573705/94‑1 (MQ=60)
GTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGC > SRR4302535.3067855/1‑94 (MQ=60)
GTAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGC > SRR4302535.3523658/1‑94 (MQ=60)
TAATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCG < SRR4302535.1840640/94‑1 (MQ=60)
ATCCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCA > SRR4302535.1230998/1‑94 (MQ=60)
CCCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACC > SRR4302535.4654089/1‑94 (MQ=60)
CCCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCG > SRR4302535.2017176/1‑94 (MQ=60)
CCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGC > SRR4302535.840765/1‑94 (MQ=60)
CCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGC > SRR4302535.4487175/1‑94 (MQ=60)
CCTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGC > SRR4302535.1306104/1‑94 (MQ=60)
CTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCC < SRR4302535.9308/94‑1 (MQ=60)
CTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCC > SRR4302535.2178647/1‑94 (MQ=60)
CTTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCC > SRR4302535.4354580/1‑94 (MQ=60)
TTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCG > SRR4302535.593959/1‑94 (MQ=60)
TTTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCG > SRR4302535.100386/1‑94 (MQ=60)
TTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGA > SRR4302535.3364487/1‑94 (MQ=60)
TTAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGA > SRR4302535.500678/1‑94 (MQ=60)
TAGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGAT < SRR4302535.2248053/94‑1 (MQ=60)
TACCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGAT < SRR4302535.4710133/94‑1 (MQ=60)
TGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATG < SRR4302535.2748490/94‑1 (MQ=60)
AGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATG > SRR4302535.1144840/1‑94 (MQ=60)
AGCCTGGCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTCGCGCACCGCCGATG > SRR4302535.71153/1‑94 (MQ=60)
GCAAAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTAC < SRR4302535.287549/94‑1 (MQ=60)
AAAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCAAGCCTTCTGGCGCACCGCCGATGGTGTACATC > SRR4302535.3058761/1‑94 (MQ=60)
AAGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCA < SRR4302535.2358843/94‑1 (MQ=60)
AGTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCAC < SRR4302535.924943/94‑1 (MQ=60)
GTCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACA > SRR4302535.1290690/1‑94 (MQ=60)
TCAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACAT < SRR4302535.2954862/94‑1 (MQ=60)
CAATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACATC > SRR4302535.3601296/1‑94 (MQ=60)
AATCGGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACATCG > SRR4302535.2404509/1‑94 (MQ=60)
GGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACATCGTAAG < SRR4302535.1611024/94‑1 (MQ=60)
GGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACATCGTAAG < SRR4302535.1219535/94‑1 (MQ=60)
GGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACATCGTAAG > SRR4302535.1339781/1‑94 (MQ=60)
GGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACATCGTAAG < SRR4302535.4399893/94‑1 (MQ=60)
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ACGTCAACGCCCATTGCCTTGCAACGCTTGCGCTCCTGCTCTGCAATCTGCCGATTTTCCGTGTAATCCCCTTTAGCCTGGCAAAAGTCAATCAGCTCGGCCTGCATATCCCCGCCTAATGCTTTAACGGCACAGGCAGAAATCACGCCTTCTGGCGCACCGCCGATGGTGTACATCACATCGTAAG > NC_000913/3073418‑3073604
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
