Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,224,879 |
Δ1 bp |
coding (1005/1434 nt) |
ygjI → |
putative oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,224,878 | 0 | G | . | 100.0%
| 704.5
/ NA
| 154 | coding (1004/1434 nt) | ygjI | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (90/64); total (90/64) |
Only 100 of 173 total aligned reads displayed.
CGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATAC > NC_000913/3224786‑3224965
|
cGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCACGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCcggcgcg > 1:4003939/1‑93 (MQ=255)
gCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCcggcgcgc > 2:3959277/1‑92 (MQ=255)
aaCGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCcggcgcgcgc > 2:725976/1‑90 (MQ=255)
aaCGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCcggcgcgcgc > 1:3392107/1‑90 (MQ=255)
aCGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCcggcgcgcgcg > 1:701184/1‑89 (MQ=255)
aCGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCcggcgcgcgca > 1:3274413/1‑89 (MQ=255)
aCGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGATGcggcgcgcgcg > 1:2470767/1‑89 (MQ=255)
ccGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCg > 2:2737774/1‑93 (MQ=255)
cGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGt > 1:4327149/1‑93 (MQ=255)
ggTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTg > 1:1303244/1‑93 (MQ=255)
ggTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTg > 2:1413311/1‑93 (MQ=255)
ggTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTg > 2:4361202/1‑93 (MQ=255)
gTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTgg < 2:2129109/93‑1 (MQ=255)
tGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGa < 1:1460907/93‑1 (MQ=255)
aaaaTTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATc > 2:2864514/1‑93 (MQ=255)
aaTTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCa > 1:4426969/1‑93 (MQ=255)
aaTTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCa < 2:21004/93‑1 (MQ=255)
tttCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGtt > 2:2850219/1‑93 (MQ=255)
ttcttcTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTc < 2:2937336/93‑1 (MQ=255)
ttcttcTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTc > 1:2245674/1‑93 (MQ=255)
cttctCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCt > 1:900876/1‑93 (MQ=255)
ttctCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTg > 1:531871/1‑93 (MQ=255)
tctcCGAAATCCCGTAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGa < 2:4530297/93‑1 (MQ=255)
tctcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGa > 1:660513/1‑93 (MQ=255)
ctcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGAt < 1:2107949/93‑1 (MQ=255)
caaaaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGt < 2:2609623/91‑1 (MQ=255)
gAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTc > 1:3135492/1‑93 (MQ=255)
aaaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCa < 2:378594/93‑1 (MQ=255)
aaaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCa > 1:1642332/1‑93 (MQ=255)
aaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCAt > 2:3103069/1‑93 (MQ=255)
aaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCAt < 2:703671/93‑1 (MQ=255)
aTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATc < 1:3046217/93‑1 (MQ=255)
ccGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCg > 2:1099413/1‑93 (MQ=255)
cGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGc < 1:4374370/93‑1 (MQ=255)
ggAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCt > 2:3821306/1‑93 (MQ=255)
gAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtg < 2:1241208/93‑1 (MQ=255)
aaGGCATCTTTGGTAAGAACACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgg > 2:2240921/1‑92 (MQ=255)
aaGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtga < 1:2490035/93‑1 (MQ=255)
aGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgat < 2:3072068/93‑1 (MQ=255)
aGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgat > 1:137060/1‑93 (MQ=255)
ggCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgatg > 2:4171885/1‑93 (MQ=255)
ggCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgatg < 1:2638051/93‑1 (MQ=255)
gCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgatga < 2:109963/93‑1 (MQ=255)
aTCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGAtt > 2:3537474/1‑93 (MQ=255)
aTCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGAtt > 2:4277823/1‑93 (MQ=255)
aTCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGAtt > 1:3209559/1‑93 (MQ=255)
tCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTa < 1:3564562/93‑1 (MQ=255)
tttGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑c > 1:1699440/1‑93 (MQ=255)
tttGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑c > 2:1480895/1‑93 (MQ=255)
ttGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑cc < 2:788806/93‑1 (MQ=255)
tGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑ccc < 1:1852754/93‑2 (MQ=255)
aGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGc > 1:4479915/1‑93 (MQ=255)
gAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCt > 2:1941292/1‑93 (MQ=255)
aaaaCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTc < 1:301808/93‑1 (MQ=255)
aaaaCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTc < 2:1406518/93‑1 (MQ=255)
aaaaCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTc > 1:83835/1‑93 (MQ=255)
aaaCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCg > 2:2651401/1‑93 (MQ=255)
aCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGt > 2:3254818/1‑93 (MQ=255)
aCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGt > 1:4667750/1‑93 (MQ=255)
ccGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGtt < 2:3031783/93‑1 (MQ=255)
gTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc > 1:367828/1‑93 (MQ=255)
gTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc > 2:4447084/1‑93 (MQ=255)
gTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc < 2:2122897/93‑1 (MQ=255)
tCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCa > 2:1939875/1‑93 (MQ=255)
cGAACTGAATGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCaa < 1:4008052/93‑1 (MQ=255)
gAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAAt < 1:2139774/93‑1 (MQ=255)
gAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAAt > 1:2830219/1‑93 (MQ=255)
aaCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATa < 2:1756347/93‑1 (MQ=255)
aaCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATa > 2:3523008/1‑93 (MQ=255)
aaCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATa > 1:389484/1‑93 (MQ=255)
aCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAc < 2:4683563/93‑1 (MQ=255)
aCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAc > 2:2416381/1‑93 (MQ=255)
cTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAcc > 1:2271526/1‑93 (MQ=255)
tGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCg < 1:2401184/93‑1 (MQ=255)
tGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCg > 1:525591/1‑93 (MQ=255)
gAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGt < 1:571293/93‑1 (MQ=255)
aCGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGc > 1:2020059/1‑93 (MQ=255)
gAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAg > 1:99653/1‑93 (MQ=255)
gAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAg > 2:4097268/1‑93 (MQ=255)
aaccGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGa < 2:4551125/90‑1 (MQ=255)
aaaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGa > 2:606822/1‑93 (MQ=255)
aaaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGa > 1:1133375/1‑93 (MQ=255)
aaaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGa > 2:3649042/1‑93 (MQ=255)
aaaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGa > 1:3469067/1‑93 (MQ=255)
aaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt < 2:4313107/93‑1 (MQ=255)
aaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt > 2:850488/1‑93 (MQ=255)
aaCGGCGTGCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt < 2:3998909/93‑1 (MQ=255)
ggCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtg < 2:4389332/93‑1 (MQ=255)
ggCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtg < 1:2893809/93‑1 (MQ=255)
gCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtga > 2:1299141/1‑93 (MQ=255)
gCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtga < 1:3606640/93‑1 (MQ=255)
gCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtga < 1:2693130/93‑1 (MQ=255)
gCGTTCCGGCGC‑GCGCAGCGTGGATCCAGATCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATATCGTGCAGGATCtga > 2:3710019/1‑93 (MQ=255)
gTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatg > 1:1206199/1‑93 (MQ=255)
ttCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatga < 1:4549594/93‑1 (MQ=255)
tCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGaa > 2:2727626/1‑93 (MQ=255)
tCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGaa < 1:1103089/93‑1 (MQ=255)
cggcgc‑gcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATa < 1:2233191/93‑1 (MQ=255)
ggcgc‑gcgcaGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATAc > 1:2132171/1‑93 (MQ=255)
ggcgc‑gcgcaGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATAc < 1:1531032/93‑1 (MQ=255)
|
CGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATAC > NC_000913/3224786‑3224965
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCG‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTA > NC_000913/3224788‑3224970
|
CAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGC > SRR4302535.3415709/1‑94 (MQ=60)
AACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCG > SRR4302535.706100/1‑94 (MQ=60)
AACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCG > SRR4302535.1389712/1‑94 (MQ=60)
AACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCA > SRR4302535.505686/1‑94 (MQ=60)
AACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCA > SRR4302535.3297157/1‑94 (MQ=60)
AACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCA > SRR4302535.2279987/1‑94 (MQ=60)
AACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGATGCGGCGCGCGCG > SRR4302535.2488580/1‑94 (MQ=60)
CCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGT > SRR4302535.4356741/1‑94 (MQ=60)
CGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTG > SRR4302535.1312548/1‑94 (MQ=60)
CGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTG < SRR4302535.2778070/94‑1 (MQ=60)
TGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGAT < SRR4302535.1471373/94‑1 (MQ=60)
AAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCA > SRR4302535.4457296/1‑94 (MQ=60)
AATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAG > SRR4302535.1295852/1‑94 (MQ=60)
AATTTTCTTCGCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAG < SRR4302535.3046560/94‑1 (MQ=60)
TTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTT > SRR4302535.2208569/1‑94 (MQ=60)
TTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTC < SRR4302535.3557703/94‑1 (MQ=60)
TTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTC > SRR4302535.529980/1‑94 (MQ=60)
TTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTC > SRR4302535.2261644/1‑94 (MQ=60)
TTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTC < SRR4302535.700163/94‑1 (MQ=60)
TCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCT > SRR4302535.907254/1‑94 (MQ=60)
CTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTG > SRR4302535.4199174/1‑94 (MQ=60)
CTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTG > SRR4302535.535593/1‑94 (MQ=60)
TTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGA > SRR4302535.665123/1‑94 (MQ=60)
CTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATC < SRR4302535.2123152/94‑1 (MQ=60)
CCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGT < SRR4302535.1487936/94‑1 (MQ=60)
CGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTC > SRR4302535.3157317/1‑94 (MQ=60)
GAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCA > SRR4302535.1654205/1‑94 (MQ=60)
AATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATC > SRR4302535.2038362/1‑94 (MQ=60)
AATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATC > SRR4302535.606126/1‑94 (MQ=60)
ATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCC < SRR4302535.3067553/94‑1 (MQ=60)
ATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCC > SRR4302535.2154249/1‑94 (MQ=60)
CGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCT < SRR4302535.4404300/94‑1 (MQ=60)
GGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCCTCCCGCTG > SRR4302535.3345098/1‑94 (MQ=60)
AAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGAT < SRR4302535.2507994/94‑1 (MQ=60)
AAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGAT > SRR4302535.138020/1‑94 (MQ=60)
AGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATG > SRR4302535.1205079/1‑94 (MQ=60)
GGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGA < SRR4302535.2656948/94‑1 (MQ=60)
GCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGAT < SRR4302535.2476563/94‑1 (MQ=60)
CATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATT > SRR4302535.3231791/1‑94 (MQ=60)
CATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATT > SRR4302535.3034838/1‑94 (MQ=60)
ATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTA > SRR4302535.192999/1‑94 (MQ=60)
TCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT < SRR4302535.3589276/94‑1 (MQ=60)
CTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C > SRR4302535.1711721/1‑94 (MQ=60)
TTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CC < SRR4302535.2305330/94‑1 (MQ=60)
TGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCcg < SRR4302535.1866100/94‑3 (MQ=60)
GTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGAT > SRR4302535.4032631/1‑94 (MQ=60)
TAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATG < SRR4302535.4015001/94‑1 (MQ=60)
AAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGC > SRR4302535.2593388/1‑94 (MQ=60)
AAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGC > SRR4302535.4510668/1‑94 (MQ=60)
AGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCT > SRR4302535.4448975/1‑94 (MQ=60)
GAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTC > SRR4302535.84424/1‑94 (MQ=60)
AAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCG < SRR4302535.303911/94‑1 (MQ=60)
AAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGG > SRR4302535.368349/1‑94 (MQ=60)
AACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGT > SRR4302535.4699293/1‑94 (MQ=60)
CGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCC > SRR4302535.370367/1‑94 (MQ=60)
CGAACTGAATGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAAT < SRR4302535.4035472/94‑1 (MQ=60)
CGAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAAT > SRR4302535.2850306/1‑94 (MQ=60)
GAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATA < SRR4302535.2155182/94‑1 (MQ=60)
GAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATA > SRR4302535.4476850/1‑94 (MQ=60)
GAACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATA > SRR4302535.392194/1‑94 (MQ=60)
AACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCCGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGATCCAATAC > SRR4302535.401143/1‑94 (MQ=60)
ACTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACC > SRR4302535.2287724/1‑94 (MQ=60)
CTGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCG > SRR4302535.529262/1‑94 (MQ=60)
TGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGT < SRR4302535.269115/94‑1 (MQ=60)
TGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGT > SRR4302535.3626310/1‑94 (MQ=60)
TGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGT < SRR4302535.2418456/94‑1 (MQ=60)
TGAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGT > SRR4302535.3178931/1‑94 (MQ=60)
GAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTG < SRR4302535.575303/94‑1 (MQ=60)
GAACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTG < SRR4302535.3245646/94‑1 (MQ=60)
AACGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGC > SRR4302535.2034625/1‑94 (MQ=60)
CGAAAACGGCGTTGCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCCTCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAG < SRR4302535.157511/94‑1 (MQ=60)
CGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAG > SRR4302535.4584691/1‑94 (MQ=60)
CGAAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAG > SRR4302535.100354/1‑94 (MQ=60)
AAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGA > SRR4302535.3493174/1‑94 (MQ=60)
AAAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGA > SRR4302535.1141465/1‑94 (MQ=60)
AAACGGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAT < SRR4302535.769657/94‑1 (MQ=60)
GGCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGA < SRR4302535.2914278/94‑1 (MQ=60)
GCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGAT < SRR4302535.2712377/94‑1 (MQ=60)
GCGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGAT < SRR4302535.3631660/94‑1 (MQ=60)
CGTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATG > SRR4302535.1214865/1‑94 (MQ=60)
GTTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGA < SRR4302535.964473/94‑1 (MQ=60)
TTCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAA < SRR4302535.4580696/94‑1 (MQ=60)
TCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAAT > SRR4302535.1800836/1‑94 (MQ=60)
TCCGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAAT < SRR4302535.1110970/94‑1 (MQ=60)
CGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATAC < SRR4302535.2249073/94‑1 (MQ=60)
CGGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATAC > SRR4302535.2147541/1‑94 (MQ=60)
GGCGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACT < SRR4302535.1542062/94‑1 (MQ=60)
CGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTAT < SRR4302535.4644050/94‑1 (MQ=60)
CGC‑‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTAT < SRR4302535.1076851/94‑1 (MQ=60)
gcGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATT < SRR4302535.2522254/92‑1 (MQ=60)
gcGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATT < SRR4302535.1963141/92‑1 (MQ=60)
C‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACGGTGCAGGATCTGATGAATACTATTA > SRR4302535.3320722/1‑94 (MQ=60)
C‑GCGCAGCGTGAATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTA < SRR4302535.1168086/94‑1 (MQ=60)
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CAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCG‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTA > NC_000913/3224788‑3224970
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
