Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,226,457 |
A→G |
N339S (AAT→AGT) |
ygjJ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,226,457 | 0 | A | G | 98.4%
| 561.0
/ ‑0.8
| 182 | N339S (AAT→AGT) | ygjJ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (64/115); total (66/116) |
| Fisher's exact test for biased strand distribution p-value = 2.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.48e-01 |
Only 100 of 202 total aligned reads displayed.
TGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTTTA > NC_000913/3226365‑3226549
|
tGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGaaaaa < 2:930673/93‑1 (MQ=255)
accaccTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGcc < 2:2268034/93‑1 (MQ=255)
accaccTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGcc > 2:2263075/1‑93 (MQ=255)
accaccTCTTTCAGGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGcc < 2:566550/93‑1 (MQ=255)
caccTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCctc < 1:3217865/93‑1 (MQ=255)
caccTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAATGCctc < 2:3863090/93‑1 (MQ=255)
ccTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCtctc > 2:2356155/1‑93 (MQ=255)
ctctTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCa < 2:129403/93‑1 (MQ=255)
ctctTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCa < 1:3906288/93‑1 (MQ=255)
tctTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCAc < 1:105981/93‑1 (MQ=255)
tctTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCAc < 2:1170658/93‑1 (MQ=255)
tctTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCAc > 2:1134123/1‑93 (MQ=255)
tttCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGa < 2:4191838/93‑1 (MQ=255)
tCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATc > 1:4622421/1‑93 (MQ=255)
tCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATc < 1:310537/93‑1 (MQ=255)
aTGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATccc > 2:1971594/1‑93 (MQ=255)
tGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCa < 1:4549071/93‑1 (MQ=255)
tGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCa > 1:908414/1‑93 (MQ=255)
tGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCa < 1:1777498/93‑1 (MQ=255)
cAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGc < 1:1168692/93‑1 (MQ=255)
gTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGa < 2:3260696/93‑1 (MQ=255)
gTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGa > 2:1677540/1‑93 (MQ=255)
tttGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGTCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGAc < 2:4337872/93‑1 (MQ=255)
tGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCa > 1:4329097/1‑93 (MQ=255)
ggTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCaa < 2:2539457/93‑1 (MQ=255)
ggTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCaa > 2:315079/1‑93 (MQ=255)
gTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCaaa < 1:2340829/93‑1 (MQ=255)
tATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAAt < 2:1462111/93‑1 (MQ=255)
aTCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATTAAAAGTGCCTCTCACGATACCCGCGACCAAATc > 2:485806/1‑93 (MQ=255)
aTCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATc < 1:1325434/93‑1 (MQ=255)
aTCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATc < 1:2957615/93‑1 (MQ=255)
tCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCt < 1:3620391/93‑1 (MQ=255)
cTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCtt > 2:1922793/1‑93 (MQ=255)
tGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTc > 1:2085991/1‑93 (MQ=255)
tACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTg < 2:4364136/93‑1 (MQ=255)
aCGAATACGGCGGCGTACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGa < 1:1664740/93‑1 (MQ=255)
cGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGAt < 2:3994723/93‑1 (MQ=255)
cGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGAt > 2:3484828/1‑93 (MQ=255)
cGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGAt < 2:4456467/93‑1 (MQ=255)
tACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCaa < 1:4404141/93‑1 (MQ=255)
tACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCaa < 1:1379495/93‑1 (MQ=255)
aCGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAat < 1:2859530/93‑1 (MQ=255)
gcggcggACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATAtt < 2:609628/93‑1 (MQ=255)
cggcggACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATAttt < 2:3499190/93‑1 (MQ=255)
ggcggACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTc < 1:2692568/93‑1 (MQ=255)
ggcggACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTc > 1:3000720/1‑93 (MQ=255)
gggACGTTTCCCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGAGGCAATATTTCTa < 2:724846/92‑1 (MQ=255)
cggACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTa > 1:4115101/1‑93 (MQ=255)
ggACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCtcc < 2:3733287/93‑3 (MQ=255)
ggACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTAc < 2:3324957/93‑1 (MQ=255)
gACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACt < 1:4502332/93‑1 (MQ=255)
aCGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTg < 1:891453/93‑1 (MQ=255)
gTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGt > 1:1849812/1‑93 (MQ=255)
gTTTCGCCACGCCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGt < 2:3510376/93‑1 (MQ=255)
tttCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGta > 1:3578382/1‑93 (MQ=255)
tttCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGta < 2:1102137/93‑1 (MQ=255)
tttCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGta > 2:4051884/1‑93 (MQ=255)
gCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGtaataa > 1:4670935/1‑93 (MQ=255)
gCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGtaataa < 1:1528161/93‑1 (MQ=255)
gCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGtaataa < 1:2279653/93‑1 (MQ=255)
cACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAgg < 2:864723/93‑1 (MQ=255)
cACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAgg > 2:256173/1‑93 (MQ=255)
cACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAgg < 2:684631/93‑1 (MQ=255)
aCGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGa < 2:2225552/93‑1 (MQ=255)
aCGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGa < 2:2165236/93‑1 (MQ=255)
aCGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGa > 1:3143365/1‑93 (MQ=255)
cGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGAc < 2:2531153/93‑1 (MQ=255)
ggCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACt < 1:484591/93‑1 (MQ=255)
ggCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACt > 2:2836842/1‑93 (MQ=255)
ggCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACt < 2:4475748/93‑1 (MQ=255)
gCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATGCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTg > 1:3303397/1‑93 (MQ=255)
cTTTTGATAGCCGCTTCTACATGAAATGTGCCTCGCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGt < 1:992261/93‑1 (MQ=255)
ttttGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTa > 2:4631214/1‑93 (MQ=255)
ttGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAAt < 1:1286946/93‑1 (MQ=255)
gATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAAttt > 2:4641532/1‑93 (MQ=255)
gATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAAttt < 1:1919391/93‑1 (MQ=255)
ggCCGCTGCTACATGAAAAGTCCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCAt < 2:2590265/92‑1 (MQ=255)
aGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCAt > 2:3092117/1‑93 (MQ=255)
aGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCAt < 1:2473643/93‑1 (MQ=255)
gCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATg < 2:1572276/93‑1 (MQ=255)
gCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCATGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATg < 1:3293337/93‑1 (MQ=255)
ccGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGa < 1:3690088/93‑1 (MQ=255)
ttCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAAt > 1:423148/1‑93 (MQ=255)
ttCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAAt > 1:3793819/1‑93 (MQ=255)
tCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATa < 1:2569371/93‑1 (MQ=255)
cTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATaa < 1:317699/93‑1 (MQ=255)
cATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATaaaaa < 1:3560365/93‑1 (MQ=255)
aTGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAAc < 1:2221263/93‑1 (MQ=255)
aTGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAAc > 2:2121643/1‑93 (MQ=255)
aTGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAAc > 1:3033107/1‑93 (MQ=255)
tGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACt < 2:4443346/93‑1 (MQ=255)
taaaagTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTa < 2:2651192/92‑1 (MQ=255)
gAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTa < 2:390997/93‑1 (MQ=255)
gAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTa < 1:2138703/93‑1 (MQ=255)
aaaagTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTAt > 1:1302347/1‑93 (MQ=255)
aaaagTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTAt > 2:771062/1‑93 (MQ=255)
aaagTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTAtt < 1:1423537/93‑1 (MQ=255)
aaagTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTAtt > 1:1315032/1‑93 (MQ=255)
aaagTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTAtt < 1:1009191/93‑1 (MQ=255)
aTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTTTa > 2:4142835/1‑93 (MQ=255)
|
TGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTTTA > NC_000913/3226365‑3226549
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTTTAA > NC_000913/3226364‑3226550
|
ATGAAACCCCCTCTTTCATGCACTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAG < SRR4302535.2360128/94‑1 (MQ=60)
ATGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAG > SRR4302535.288100/1‑94 (MQ=60)
TGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGT < SRR4302535.229040/94‑1 (MQ=60)
GAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTG < SRR4302535.2873205/94‑1 (MQ=60)
GAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTG < SRR4302535.3226830/94‑1 (MQ=60)
ACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCT > SRR4302535.2508037/1‑94 (MQ=60)
ACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCT < SRR4302535.1896934/94‑1 (MQ=60)
ACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGGGCCT > SRR4302535.3245231/1‑94 (MQ=60)
CCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTC > SRR4302535.142819/1‑94 (MQ=60)
CACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCT < SRR4302535.1314453/94‑1 (MQ=60)
CACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCT < SRR4302535.2060668/94‑1 (MQ=60)
CACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCT < SRR4302535.3240152/94‑1 (MQ=60)
CTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCAC < SRR4302535.3933051/94‑1 (MQ=60)
TCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACG < SRR4302535.106735/94‑1 (MQ=60)
TTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATC > SRR4302535.4653819/1‑94 (MQ=60)
TCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCC < SRR4302535.312690/94‑1 (MQ=60)
ATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCA > SRR4302535.914863/1‑94 (MQ=60)
TGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAG < SRR4302535.4580172/94‑1 (MQ=60)
TGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAG < SRR4302535.1790373/94‑1 (MQ=60)
CAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCG < SRR4302535.1177034/94‑1 (MQ=60)
GTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGAC > SRR4302535.1325345/1‑94 (MQ=60)
TTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCA > SRR4302535.4358696/1‑94 (MQ=60)
TGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCaccgcgacaca > SRR4302535.3585191/1‑83 (MQ=60)
GGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAA > SRR4302535.4717072/1‑94 (MQ=60)
GTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAAT < SRR4302535.1651477/94‑1 (MQ=60)
GTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAAT < SRR4302535.1075366/94‑1 (MQ=60)
GTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAAT < SRR4302535.2357575/94‑1 (MQ=60)
TATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATC < SRR4302535.229280/94‑1 (MQ=60)
TATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATC < SRR4302535.3178744/94‑1 (MQ=60)
TATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGAGCCTCTCACGATGCCAGCGACCCAATC > SRR4302535.2146442/1‑94 (MQ=60)
ATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCT < SRR4302535.2978386/94‑1 (MQ=60)
ATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCT < SRR4302535.1334896/94‑1 (MQ=60)
TCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTT < SRR4302535.3645487/94‑1 (MQ=60)
CTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTC > SRR4302535.2101013/1‑94 (MQ=60)
ACGAATACGGCGGCGTACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGAT < SRR4302535.1676771/94‑1 (MQ=60)
CGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATG > SRR4302535.3096848/1‑94 (MQ=60)
TACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAAT < SRR4302535.4434278/94‑1 (MQ=60)
TACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAAT < SRR4302535.1389334/94‑1 (MQ=60)
TACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAAT > SRR4302535.1249388/1‑94 (MQ=60)
ACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATA < SRR4302535.2879785/94‑1 (MQ=60)
ACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATA < SRR4302535.2793223/94‑1 (MQ=60)
CGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCTCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATAT < SRR4302535.2342084/94‑1 (MQ=60)
CGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTC > SRR4302535.3021756/1‑94 (MQ=60)
GGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCT < SRR4302535.2711815/94‑1 (MQ=60)
GGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCT > SRR4302535.1062016/1‑94 (MQ=60)
GGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCT < SRR4302535.3741194/94‑1 (MQ=60)
GCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTA > SRR4302535.4143269/1‑94 (MQ=60)
GACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTG < SRR4302535.3909687/94‑1 (MQ=60)
GACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTG < SRR4302535.4533250/94‑1 (MQ=60)
GACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTG < SRR4302535.4491844/94‑1 (MQ=60)
ACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGG < SRR4302535.897770/94‑1 (MQ=60)
CGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGT < SRR4302535.2694807/94‑1 (MQ=60)
CGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGT > SRR4302535.1863143/1‑94 (MQ=60)
CGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGT > SRR4302535.4658286/1‑94 (MQ=60)
CGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGT > SRR4302535.929297/1‑94 (MQ=60)
GTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTA > SRR4302535.3603189/1‑94 (MQ=60)
CGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAA > SRR4302535.4702485/1‑94 (MQ=60)
GCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAG < SRR4302535.2295936/94‑1 (MQ=60)
GCCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAG < SRR4302535.1539167/94‑1 (MQ=60)
CCACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGG > SRR4302535.3994920/1‑94 (MQ=60)
CACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGA > SRR4302535.4325664/1‑94 (MQ=60)
CACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGA > SRR4302535.3318716/1‑94 (MQ=60)
CACGGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGA > SRR4302535.3165232/1‑94 (MQ=60)
GGCTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTG < SRR4302535.487989/94‑1 (MQ=60)
GGCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATGCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTG > SRR4302535.3326370/1‑94 (MQ=60)
CTTTTGATAGCCGCTTCTACATGAAATGTGCCTCGCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTA < SRR4302535.999304/94‑1 (MQ=60)
CTTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTA > SRR4302535.3131611/1‑94 (MQ=60)
TTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAA < SRR4302535.4544675/94‑1 (MQ=60)
TTTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAA > SRR4302535.4407613/1‑94 (MQ=60)
TTTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAAT < SRR4302535.90950/94‑1 (MQ=60)
TTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATT < SRR4302535.2485490/94‑1 (MQ=60)
TTGATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATT < SRR4302535.1296115/94‑1 (MQ=60)
GATAGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTC < SRR4302535.1933226/94‑1 (MQ=60)
AGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATG < SRR4302535.2491484/94‑1 (MQ=60)
AGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATG > SRR4302535.4254350/1‑94 (MQ=60)
AGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATG > SRR4302535.3381880/1‑94 (MQ=60)
AGCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATG > SRR4302535.3022714/1‑94 (MQ=60)
GCCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCATGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGA < SRR4302535.3316234/94‑1 (MQ=60)
CCGCTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAA < SRR4302535.3715629/94‑1 (MQ=60)
CTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAAT > SRR4302535.426102/1‑94 (MQ=60)
CTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAAT < SRR4302535.1309771/94‑1 (MQ=60)
CTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAAT > SRR4302535.3819975/1‑94 (MQ=60)
CTTCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAAT < SRR4302535.1355786/94‑1 (MQ=60)
TCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAA < SRR4302535.2587850/94‑1 (MQ=60)
TCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAA < SRR4302535.1743513/94‑1 (MQ=60)
TCTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAA < SRR4302535.1838660/94‑1 (MQ=60)
CTACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAA < SRR4302535.319903/94‑1 (MQ=60)
TACATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAA > SRR4302535.3629532/1‑94 (MQ=60)
CATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAAC > SRR4302535.1495365/1‑94 (MQ=60)
CATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAAC < SRR4302535.3585052/94‑1 (MQ=60)
CATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAAC < SRR4302535.2167312/94‑1 (MQ=60)
CATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAAC > SRR4302535.3054340/1‑94 (MQ=60)
ATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACT < SRR4302535.2237079/94‑1 (MQ=60)
ATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACT < SRR4302535.45947/94‑1 (MQ=60)
ATGAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACT < SRR4302535.3686102/94‑1 (MQ=60)
GAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTAT < SRR4302535.298455/94‑1 (MQ=60)
GAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTAT < SRR4302535.2154105/94‑1 (MQ=60)
GAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTAT > SRR4302535.1311648/1‑94 (MQ=60)
GAAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTAT > SRR4302535.2888352/1‑94 (MQ=60)
AAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATT < SRR4302535.686634/94‑1 (MQ=60)
AAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATT > SRR4302535.1324427/1‑94 (MQ=60)
AAAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATT < SRR4302535.3217780/94‑1 (MQ=60)
AAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTT < SRR4302535.1433702/94‑1 (MQ=60)
AAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTT > SRR4302535.2222110/1‑94 (MQ=60)
AAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTT > SRR4302535.2420648/1‑94 (MQ=60)
AAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTT > SRR4302535.2826786/1‑94 (MQ=60)
AAAGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTT < SRR4302535.1016361/94‑1 (MQ=60)
AGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTTTA < SRR4302535.2350218/94‑1 (MQ=60)
AGTGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTTTA < SRR4302535.112648/94‑1 (MQ=60)
ATGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTTTAA > SRR4302535.2630656/1‑94 (MQ=60)
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ATGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAATAAGGACTGTAATTTCATGAAAATAAAAACTATTTTAA > NC_000913/3226364‑3226550
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
