Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,383,369 |
C→T |
T83M (ACG→ATG) |
yhcN → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,383,369 | 0 | C | T | 100.0%
| 814.3
/ NA
| 224 | T83M (ACG→ATG) | yhcN | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (123/101); total (123/101) |
Only 100 of 229 total aligned reads displayed.
AATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACG > NC_000913/3383280‑3383458
|
aTCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGcc < 2:129546/93‑1 (MQ=255)
tCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCt > 1:930632/1‑93 (MQ=255)
aCCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTAcatg > 1:3761873/1‑90 (MQ=255)
ccGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGa > 2:4151393/1‑93 (MQ=255)
ccGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGa > 1:2365321/1‑93 (MQ=255)
cGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGAt < 2:514672/93‑1 (MQ=255)
cGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGAt < 1:696697/93‑1 (MQ=255)
cGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGAt < 2:2930743/93‑1 (MQ=255)
gTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGAtt > 2:2311895/1‑93 (MQ=255)
tATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTa > 2:4536382/1‑93 (MQ=255)
tATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTa > 2:3957969/1‑93 (MQ=255)
ccGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTg > 2:4229904/1‑93 (MQ=255)
ccGTAAGTGGAGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAGAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTg > 2:763315/1‑93 (MQ=255)
cGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGa > 2:374878/1‑93 (MQ=255)
cGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGa > 2:3371047/1‑93 (MQ=255)
cGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGa < 2:122823/93‑1 (MQ=255)
gTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGaa < 2:4283052/93‑1 (MQ=255)
gtggtgTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTc < 2:3711552/93‑1 (MQ=255)
gtggtgTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTc > 1:899426/1‑93 (MQ=255)
gtgtGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTa < 1:1010963/93‑1 (MQ=255)
tgtgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAg > 2:792549/1‑93 (MQ=255)
gtgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGACGCTCGTAGc > 1:1755243/1‑93 (MQ=255)
gtgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGc < 1:2672943/93‑1 (MQ=255)
gtgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGc > 2:3158994/1‑93 (MQ=255)
gtgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGc < 1:2276053/93‑1 (MQ=255)
gtgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGc < 2:2664695/93‑1 (MQ=255)
tgGCGTCTTCGCTAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCg < 2:2785743/93‑1 (MQ=255)
tgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCg > 1:1284800/1‑93 (MQ=255)
tgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCg > 2:1048288/1‑93 (MQ=255)
ggCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCgg < 1:4633828/93‑1 (MQ=255)
ggCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCgg > 2:1487745/1‑93 (MQ=255)
gTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGa < 2:646966/93‑1 (MQ=255)
tCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGac < 1:3068193/93‑1 (MQ=255)
tCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGac > 1:4345678/1‑93 (MQ=255)
tCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGac > 1:250121/1‑93 (MQ=255)
tCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGac > 1:3974882/1‑93 (MQ=255)
tCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGac > 1:246774/1‑93 (MQ=255)
tCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGac < 1:2179665/93‑1 (MQ=255)
cTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGacg > 1:295991/1‑92 (MQ=255)
tCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGcc < 2:670037/93‑1 (MQ=255)
gCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTg < 1:1069312/93‑1 (MQ=255)
cAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGc > 1:4395773/1‑93 (MQ=255)
aTGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCAc < 1:4246151/93‑1 (MQ=255)
aTGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCAc > 1:2024808/1‑93 (MQ=255)
aTGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCAc > 1:662994/1‑93 (MQ=255)
tGGATATGCGTGAAATGCTTAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACg > 2:410851/1‑93 (MQ=255)
gATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCt > 1:3243576/1‑93 (MQ=255)
gATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCt < 1:540515/93‑1 (MQ=255)
atatGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTa > 2:1865863/1‑93 (MQ=255)
tatGCGTGAAATGCTGAACAAAAAATCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTAc < 2:1478163/93‑1 (MQ=255)
tatGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCGTGGCACGCTAc > 1:4163994/1‑93 (MQ=255)
tatGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTAc < 1:592284/93‑1 (MQ=255)
tatGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTAc > 2:723023/1‑93 (MQ=255)
tatGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTAc < 1:1866287/93‑1 (MQ=255)
tatGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTAc < 2:3627443/93‑1 (MQ=255)
tatGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTAc < 1:3796281/93‑1 (MQ=255)
tatGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTAc > 2:1779191/1‑93 (MQ=255)
atGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACg > 1:3694756/1‑93 (MQ=255)
atGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACg > 2:2995668/1‑93 (MQ=255)
tGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACgg > 1:3618521/1‑93 (MQ=255)
gCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGc < 1:2750013/93‑1 (MQ=255)
gCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGc < 1:4042091/93‑1 (MQ=255)
cGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCt > 1:3050349/1‑93 (MQ=255)
gTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTg > 1:3326768/1‑93 (MQ=255)
tGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGa > 1:1536710/1‑93 (MQ=255)
tGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGa < 1:3832384/93‑1 (MQ=255)
tGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGa > 1:828080/1‑93 (MQ=255)
ggAAATGCTAAACAAAAAAGCGGAAGAGAAAGGCGCAATGCCCTACCAGATTACTGAAGCTCGTAGCGGTGACGGCTGGCTCGCTACGGCTGa < 2:2736257/92‑1 (MQ=255)
aTGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTg > 2:1962341/1‑93 (MQ=255)
aTGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTg > 1:3153307/1‑93 (MQ=255)
aTGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTg < 2:4424015/93‑1 (MQ=255)
aTGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTg > 2:3046234/1‑93 (MQ=255)
gCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTa < 2:2050777/93‑1 (MQ=255)
cTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTAc < 2:2985321/93‑1 (MQ=255)
tGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACa > 1:732273/1‑93 (MQ=255)
aCAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAAt > 1:4481573/1‑93 (MQ=255)
aCAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAAt < 2:2133501/93‑1 (MQ=255)
aCAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAAt < 2:2257827/93‑1 (MQ=255)
aaaaaaGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATaa > 2:2869106/1‑93 (MQ=255)
aaaaaaGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATaa < 2:3461824/93‑1 (MQ=255)
aataaGTGGAAGAGAAAGGCGCAATGGCCGACTAGATTTCTGAAGCTCTTAGCGGTGACGCCTGGCACGCTACGGCTGAACCTTACAaaaaaa > 2:4680467/4‑93 (MQ=255)
aaaaaGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCCCGCTACGGCTGAACTGTACAAATaaa < 2:785755/93‑1 (MQ=255)
aaaaaGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATaaa > 1:2873537/1‑93 (MQ=255)
aaaaGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAAc > 2:1650869/1‑93 (MQ=255)
aaGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAAccc > 2:585224/1‑93 (MQ=255)
aGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCt < 1:310557/93‑1 (MQ=255)
cGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCa < 1:4076858/93‑1 (MQ=255)
aaGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCg < 2:3556754/93‑1 (MQ=255)
agagAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGt > 1:1683846/1‑93 (MQ=255)
agagAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGt > 1:1435765/1‑93 (MQ=255)
agaAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCt > 2:3544639/1‑93 (MQ=255)
gaAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCtt < 2:3772649/93‑1 (MQ=255)
aaaGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTg < 1:1563846/93‑1 (MQ=255)
aaGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGt > 1:1104839/1‑93 (MQ=255)
aGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTc < 2:2437028/93‑1 (MQ=255)
aGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTc < 2:155212/93‑1 (MQ=255)
ggCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTcc < 1:260229/93‑1 (MQ=255)
ggCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTcc < 1:3450624/93‑1 (MQ=255)
gcAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCcgac < 2:4589885/93‑1 (MQ=255)
cAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCcgacg > 1:3755270/1‑93 (MQ=255)
|
AATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACG > NC_000913/3383280‑3383458
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATAT > NC_000913/3383276‑3383462
|
AAGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAAT < SRR4302535.4537332/94‑1 (MQ=60)
AAGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAAT < SRR4302535.4291041/94‑1 (MQ=60)
AAGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAAT < SRR4302535.2830379/94‑1 (MQ=60)
AGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATG > SRR4302535.167312/1‑94 (MQ=60)
AGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATG > SRR4302535.1823635/1‑94 (MQ=60)
ATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCT > SRR4302535.937213/1‑94 (MQ=60)
GACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACatg > SRR4302535.3787868/1‑91 (MQ=60)
ACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGA > SRR4302535.2382301/1‑94 (MQ=60)
CGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATT < SRR4302535.3552217/94‑1 (MQ=60)
CGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATT < SRR4302535.701583/94‑1 (MQ=60)
GTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTA > SRR4302535.2933017/1‑94 (MQ=60)
GTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTA < SRR4302535.680677/94‑1 (MQ=60)
GTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTA > SRR4302535.1680350/1‑94 (MQ=60)
TCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTG < SRR4302535.1768400/94‑1 (MQ=60)
AGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTC > SRR4302535.905795/1‑94 (MQ=60)
GGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTA < SRR4302535.1680737/94‑1 (MQ=60)
GTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAG < SRR4302535.1018145/94‑1 (MQ=60)
GTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAG < SRR4302535.4051102/94‑1 (MQ=60)
TGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGACGCTCGTAGC > SRR4302535.1767927/1‑94 (MQ=60)
TGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGC > SRR4302535.3300740/1‑94 (MQ=60)
GTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCG > SRR4302535.1293956/1‑94 (MQ=60)
GTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCG < SRR4302535.2692066/94‑1 (MQ=60)
GTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCG < SRR4302535.2292304/94‑1 (MQ=60)
GGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGT < SRR4302535.4665261/94‑1 (MQ=60)
CGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGA > SRR4302535.134991/1‑94 (MQ=60)
CGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGA > SRR4302535.3727986/1‑94 (MQ=60)
GTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGAC > SRR4302535.4375413/1‑94 (MQ=60)
GTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGAC > SRR4302535.3083248/1‑94 (MQ=60)
GTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGAC > SRR4302535.251842/1‑94 (MQ=60)
GTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGAC > SRR4302535.248465/1‑94 (MQ=60)
GTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGAC > SRR4302535.4002037/1‑94 (MQ=60)
TCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACG < SRR4302535.2195225/94‑1 (MQ=60)
TCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACG > SRR4302535.3421376/1‑94 (MQ=60)
TCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACG < SRR4302535.3089627/94‑1 (MQ=60)
TCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACG > SRR4302535.298055/1‑94 (MQ=60)
CTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGC > SRR4302535.1149422/1‑94 (MQ=60)
TTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCC < SRR4302535.3094559/94‑1 (MQ=60)
TCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCT < SRR4302535.2351075/94‑1 (MQ=60)
CGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTG < SRR4302535.2763594/94‑1 (MQ=60)
GCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGG < SRR4302535.1076913/94‑1 (MQ=60)
CCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGC > SRR4302535.4442032/1‑94 (MQ=60)
CCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGC > SRR4302535.4425855/1‑94 (MQ=60)
CCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGC < SRR4302535.3714435/94‑1 (MQ=60)
CAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCA < SRR4302535.3950211/94‑1 (MQ=60)
AATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCAC > SRR4302535.2581752/1‑94 (MQ=60)
AATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCAC > SRR4302535.2039400/1‑94 (MQ=60)
AATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCAC > SRR4302535.667626/1‑94 (MQ=60)
AATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCAC < SRR4302535.1557214/94‑1 (MQ=60)
ATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACG < SRR4302535.4275220/94‑1 (MQ=60)
GGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCT > SRR4302535.3266107/1‑94 (MQ=60)
GATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTA < SRR4302535.544287/94‑1 (MQ=60)
ATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCGTGGCACGCTAC > SRR4302535.4192500/1‑94 (MQ=60)
ATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTAC > SRR4302535.911375/1‑94 (MQ=60)
ATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTAC < SRR4302535.4572762/94‑1 (MQ=60)
ATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTAC < SRR4302535.2675985/94‑1 (MQ=60)
TATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACG > SRR4302535.3720330/1‑94 (MQ=60)
TATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACG < SRR4302535.1879735/94‑1 (MQ=60)
TATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACG < SRR4302535.3822450/94‑1 (MQ=60)
TATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACG < SRR4302535.596435/94‑1 (MQ=60)
ATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGG > SRR4302535.3643606/1‑94 (MQ=60)
GCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCT < SRR4302535.2769619/94‑1 (MQ=60)
GCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCT > SRR4302535.3071716/1‑94 (MQ=60)
GCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCT < SRR4302535.4069763/94‑1 (MQ=60)
CGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTG < SRR4302535.4042711/94‑1 (MQ=60)
CGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTG > SRR4302535.3349918/1‑94 (MQ=60)
CGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTG > SRR4302535.2158669/1‑94 (MQ=60)
GTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGA > SRR4302535.1547783/1‑94 (MQ=60)
GTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGA > SRR4302535.833877/1‑94 (MQ=60)
TGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAA > SRR4302535.1492462/1‑94 (MQ=60)
TGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAA < SRR4302535.3858812/94‑1 (MQ=60)
TGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAA > SRR4302535.2501609/1‑94 (MQ=60)
GAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAAC < SRR4302535.663591/94‑1 (MQ=60)
AATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTG > SRR4302535.3175216/1‑94 (MQ=60)
ATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGT > SRR4302535.654914/1‑94 (MQ=60)
ATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGT < SRR4302535.3010035/94‑1 (MQ=60)
TGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTGCCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTA < SRR4302535.2201677/94‑1 (MQ=60)
TGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTA < SRR4302535.1003603/94‑1 (MQ=60)
CTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACA > SRR4302535.3791627/1‑94 (MQ=60)
CTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACA > SRR4302535.857640/1‑94 (MQ=60)
CTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACA > SRR4302535.737414/1‑94 (MQ=60)
TGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAA > SRR4302535.1419405/1‑94 (MQ=60)
AACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAAT < SRR4302535.3490433/94‑1 (MQ=60)
AACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAAT < SRR4302535.892545/94‑1 (MQ=60)
AACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAAT > SRR4302535.4512333/1‑94 (MQ=60)
AAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAA > SRR4302535.2893898/1‑94 (MQ=60)
AAAAAAGCGGAAGAGAAAGACGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAA < SRR4302535.3046500/94‑1 (MQ=60)
AAAGAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAAC < SRR4302535.428053/94‑1 (MQ=60)
AAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAAC > SRR4302535.2462090/1‑94 (MQ=60)
AAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAAC > SRR4302535.1099286/1‑94 (MQ=60)
AAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACC < SRR4302535.3142932/94‑1 (MQ=60)
AAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCC > SRR4302535.4261238/1‑94 (MQ=60)
AAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCT > SRR4302535.718153/1‑94 (MQ=60)
AAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCT < SRR4302535.2190698/94‑1 (MQ=60)
AGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTC < SRR4302535.312711/94‑1 (MQ=60)
GCNGAANAGAAAGGCGCAATGCNCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCA < SRR4302535.3784637/94‑1 (MQ=60)
CGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCAT < SRR4302535.1698530/94‑1 (MQ=60)
CGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCAT < SRR4302535.4104755/94‑1 (MQ=60)
CGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCAT > SRR4302535.3792977/1‑94 (MQ=60)
CGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGGACAAATAAACCCTCAT > SRR4302535.4391883/1‑94 (MQ=60)
GGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATC > SRR4302535.579775/1‑94 (MQ=60)
GGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATC > SRR4302535.1965365/1‑94 (MQ=60)
GAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCG < SRR4302535.411326/94‑1 (MQ=60)
GAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCG < SRR4302535.3195585/94‑1 (MQ=60)
AAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGT > SRR4302535.1446024/1‑94 (MQ=60)
AAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGT > SRR4302535.1696041/1‑94 (MQ=60)
AGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGct > SRR4302535.4687482/1‑92 (MQ=60)
GAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCT > SRR4302535.2395746/1‑94 (MQ=60)
AGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTT > SRR4302535.2804882/1‑94 (MQ=60)
AAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGT < SRR4302535.1575134/94‑1 (MQ=60)
AAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGT > SRR4302535.783776/1‑94 (MQ=60)
AAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGT > SRR4302535.4602323/1‑94 (MQ=60)
AAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGT > SRR4302535.1112735/1‑94 (MQ=60)
AAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTC < SRR4302535.1034321/94‑1 (MQ=60)
GGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCG < SRR4302535.262033/94‑1 (MQ=60)
GGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCG < SRR4302535.3474608/94‑1 (MQ=60)
GCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGA > SRR4302535.3851948/1‑94 (MQ=60)
CGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGAC < SRR4302535.2760621/94‑1 (MQ=60)
CGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGAC > SRR4302535.4241581/1‑94 (MQ=60)
CGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGAC > SRR4302535.4101426/1‑94 (MQ=60)
CGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGAC < SRR4302535.3188447/94‑1 (MQ=60)
GCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACG > SRR4302535.3781245/1‑94 (MQ=60)
CAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGA > SRR4302535.2251253/1‑94 (MQ=60)
CAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGA > SRR4302535.64450/1‑94 (MQ=60)
CAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGA > SRR4302535.3528035/1‑94 (MQ=60)
AATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGAT < SRR4302535.1708664/94‑1 (MQ=60)
AATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGAT > SRR4302535.1019432/1‑94 (MQ=60)
ATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATA < SRR4302535.484166/94‑1 (MQ=60)
ATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATA > SRR4302535.467171/1‑94 (MQ=60)
ATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATA < SRR4302535.2743030/94‑1 (MQ=60)
TGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATAT < SRR4302535.2754004/94‑1 (MQ=60)
TGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACGCCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATAT < SRR4302535.400892/94‑1 (MQ=60)
|
AAGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATAT > NC_000913/3383276‑3383462
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
