Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,472,649 |
G→A |
R107R (CGC→CGT) |
yheM ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,472,649 | 0 | G | A | 96.7%
| 816.7
/ 5.1
| 242 | R107R (CGC→CGT) | yheM | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (5/3); new base A (129/105); total (134/108) |
| Fisher's exact test for biased strand distribution p-value = 7.35e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.99e-01 |
Only 100 of 255 total aligned reads displayed.
GCAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCACAAA > NC_000913/3472559‑3472737
|
gcaAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCgcgacg < 2:1329636/93‑1 (MQ=255)
gcaAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCgcgacg > 2:2005915/1‑93 (MQ=255)
gcaAAATCCGTCAGCCAGGGCGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCgcgacg > 1:2499613/1‑93 (MQ=255)
aaaaTCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTa < 1:1046007/93‑1 (MQ=255)
aaaTCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTaa < 1:1568642/93‑1 (MQ=255)
aaaTCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTaa < 2:1204845/93‑1 (MQ=255)
aaaTCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTaa < 1:383289/93‑1 (MQ=255)
aaTCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAg < 2:4229635/93‑1 (MQ=255)
aTCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAgg > 2:2779286/1‑93 (MQ=255)
tCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGc > 1:4237030/1‑93 (MQ=255)
tCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGc < 2:4483159/93‑1 (MQ=255)
tCCGTCAGCCAGGGAGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGc > 2:1830998/1‑93 (MQ=255)
cGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCAt > 2:2064139/1‑93 (MQ=255)
cGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCAt < 1:4263835/93‑1 (MQ=255)
gTCAGCCCGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATc < 2:1258190/93‑1 (MQ=255)
gTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATc < 2:2716220/93‑1 (MQ=255)
tCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCt > 2:3554171/1‑93 (MQ=255)
aGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGc < 1:3140910/93‑1 (MQ=255)
aGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCg < 1:3494026/93‑1 (MQ=255)
aGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCg < 1:4252847/93‑1 (MQ=255)
gggTTAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGa > 1:1629509/1‑93 (MQ=255)
gggTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGa > 2:638464/1‑93 (MQ=255)
gggTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGa > 1:5468/1‑93 (MQ=255)
gAGCGATGTAATGTGTGCAGCATAAACGCCTAAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAgcgg < 1:2176630/93‑1 (MQ=255)
gCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAgcggcg < 1:4328282/93‑1 (MQ=255)
cGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGt < 1:3708751/93‑1 (MQ=255)
gATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTg > 1:2400307/1‑93 (MQ=255)
gTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCt < 2:3413342/93‑1 (MQ=255)
aaTGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTc > 1:2661690/1‑93 (MQ=255)
tgtgtgCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGa > 2:1776376/1‑93 (MQ=255)
tgtgtgCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGa > 2:327677/1‑93 (MQ=255)
tgtgtgCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCCGCGTGGCTTCgc > 1:3884630/1‑92 (MQ=255)
tgtgCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGaca > 2:2617102/1‑93 (MQ=255)
tgtgCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGaca < 2:1958000/93‑1 (MQ=255)
gtgCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGacaa > 1:3639965/1‑93 (MQ=255)
gtgCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGacaa > 1:594781/1‑93 (MQ=255)
agcaTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACaaa < 1:3590292/93‑1 (MQ=255)
agcaTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACaaa < 2:4507638/93‑1 (MQ=255)
agcaTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACaaa > 1:2925886/1‑93 (MQ=255)
gcaTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAg > 2:2472153/1‑93 (MQ=255)
caTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAgg < 1:4477066/93‑1 (MQ=255)
aTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAggg > 1:420102/1‑93 (MQ=255)
aTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAggg > 2:3993765/1‑93 (MQ=255)
aTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAggg > 1:1441519/1‑93 (MQ=255)
aTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAggg > 2:4583277/1‑93 (MQ=255)
aTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAggg > 2:4118524/1‑93 (MQ=255)
tAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGgt < 2:544737/93‑1 (MQ=255)
tAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGgt > 1:4628139/1‑93 (MQ=255)
tAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGgt < 1:886322/93‑1 (MQ=255)
aaCGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGgtgt > 1:2831241/1‑93 (MQ=255)
aCGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTc < 1:4168741/93‑1 (MQ=255)
aCGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTc < 1:4585076/93‑1 (MQ=255)
aCGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTc < 1:2620567/93‑1 (MQ=255)
gCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTCGCTTCGACAACAAAGGGTGTCTg > 1:2279501/1‑93 (MQ=255)
cctcaaaacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGc > 1:3207699/1‑93 (MQ=255)
ctcaaaacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCg > 2:4164872/1‑93 (MQ=255)
ctcaaaacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCg < 1:3093633/93‑1 (MQ=255)
ctcaaaacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCg > 2:4659490/1‑93 (MQ=255)
ctcaaaacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCg < 1:2225343/93‑1 (MQ=255)
tcaaaacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCgg > 1:4117371/1‑93 (MQ=255)
tcaaaacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGAGTCTGCgg > 2:4428024/1‑93 (MQ=255)
caaaacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGa < 1:2572495/93‑1 (MQ=255)
aaaacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGAt > 1:3322418/1‑93 (MQ=255)
aaacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATc < 2:2952517/93‑1 (MQ=255)
aacctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCt < 1:2728229/93‑1 (MQ=255)
acctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTa > 2:372419/1‑93 (MQ=255)
ctcaacaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAAc < 2:4136893/93‑1 (MQ=255)
ctcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAAc < 2:2356684/93‑1 (MQ=255)
tcaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAAcc < 2:3090707/93‑1 (MQ=255)
taaaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAAcc < 2:1023244/91‑1 (MQ=255)
caaaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAAccc > 2:1457117/1‑93 (MQ=255)
aaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCcgc < 1:1164744/93‑1 (MQ=255)
aaaTAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCcgc > 2:677817/1‑93 (MQ=255)
tAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGtt > 2:111900/1‑93 (MQ=255)
tAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGtt > 1:3738619/1‑93 (MQ=255)
aCATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTcg > 2:2113060/1‑93 (MQ=255)
aCATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTcg > 2:3847427/1‑93 (MQ=255)
aCATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTcg < 2:4323950/93‑1 (MQ=255)
aTCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTcgcg > 1:3559788/1‑93 (MQ=255)
aTCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGCCTGCGGCTCTAACCCGCGTTcgcg > 1:2347453/1‑93 (MQ=255)
tCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCgcgc < 2:2634637/93‑1 (MQ=255)
tCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCgcgc < 1:2013290/93‑1 (MQ=255)
cGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCa < 1:138499/93‑1 (MQ=255)
cGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCa < 1:1746181/93‑1 (MQ=255)
gTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAg > 2:800246/1‑93 (MQ=255)
aGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTg < 1:1813256/93‑1 (MQ=255)
gTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGa > 1:23058/1‑93 (MQ=255)
gTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGa > 1:3949572/1‑93 (MQ=255)
gTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGa > 2:859096/1‑93 (MQ=255)
ttGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGaa < 2:932043/93‑1 (MQ=255)
ttGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGaa < 1:3283006/93‑1 (MQ=255)
ttGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGaa < 2:1164708/93‑1 (MQ=255)
ggCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGc < 1:2789768/93‑1 (MQ=255)
agCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCCGTCGCGCAGTGAAGc > 2:1861708/2‑93 (MQ=255)
gCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGcc < 2:1673138/93‑1 (MQ=255)
gCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGcc > 2:710197/1‑93 (MQ=255)
gAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGc > 2:4626454/1‑93 (MQ=255)
gTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGcac < 1:152468/93‑1 (MQ=255)
gTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGcac > 2:2930759/1‑93 (MQ=255)
ttCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGcaca > 2:301000/1‑93 (MQ=255)
|
GCAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCACAAA > NC_000913/3472559‑3472737
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCACAAACCCAG > NC_000913/3472558‑3472742
|
AGCAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCGTAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACG > SRR4302535.3322367/1‑94 (MQ=60)
AGCAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACG > SRR4302535.3860773/1‑94 (MQ=60)
AGCAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACG > SRR4302535.2595551/1‑94 (MQ=60)
AGCAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACG < SRR4302535.1347214/94‑1 (MQ=60)
AGCAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACG > SRR4302535.283847/1‑94 (MQ=60)
AGCAAAATCCGTCAGCCAGGGCGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACG > SRR4302535.2517645/1‑94 (MQ=60)
CAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTA > SRR4302535.3602030/1‑94 (MQ=60)
CAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTA > SRR4302535.1604398/1‑94 (MQ=60)
AAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAA < SRR4302535.1053420/94‑1 (MQ=60)
AAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAG < SRR4302535.385945/94‑1 (MQ=60)
AAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAG < SRR4302535.1579962/94‑1 (MQ=60)
AAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAG > SRR4302535.1566082/1‑94 (MQ=60)
AATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGG < SRR4302535.2732804/94‑1 (MQ=60)
AATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGG < SRR4302535.230016/94‑1 (MQ=60)
ATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGC > SRR4302535.4266026/1‑94 (MQ=60)
CCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAACCCGCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCAT < SRR4302535.525146/94‑1 (MQ=60)
CCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCAT < SRR4302535.3103466/94‑1 (MQ=60)
CGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATC < SRR4302535.4293033/94‑1 (MQ=60)
GTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCT < SRR4302535.356125/94‑1 (MQ=60)
CAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGC > SRR4302535.220049/1‑94 (MQ=60)
AGCCAGGGTGAGCGTTGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCT > SRR4302535.3173128/1‑94 (MQ=60)
AGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCT < SRR4302535.3162765/94‑1 (MQ=60)
AGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCT > SRR4302535.1474810/1‑94 (MQ=60)
GCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTT > SRR4302535.1429870/1‑94 (MQ=60)
GCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTT < SRR4302535.4593741/94‑1 (MQ=60)
CCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTC > SRR4302535.1803062/1‑94 (MQ=60)
AGGGTTAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGA > SRR4302535.1641278/1‑94 (MQ=60)
AGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGA < SRR4302535.3518304/94‑1 (MQ=60)
AGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGA > SRR4302535.5518/1‑94 (MQ=60)
AGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGA < SRR4302535.4281987/94‑1 (MQ=60)
GGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAG < SRR4302535.4321999/94‑1 (MQ=60)
GAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGC > SRR4302535.4275879/1‑94 (MQ=60)
GAGCGATGTAATGTGTGCAGCATAAACGCCTAAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGC < SRR4302535.2192186/94‑1 (MQ=60)
AGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCG < SRR4302535.2030594/94‑1 (MQ=60)
GCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGT < SRR4302535.4357877/94‑1 (MQ=60)
CGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTG < SRR4302535.307728/94‑1 (MQ=60)
CGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTG > SRR4302535.2417570/1‑94 (MQ=60)
CGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTG < SRR4302535.3734430/94‑1 (MQ=60)
TGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCT < SRR4302535.3708910/94‑1 (MQ=60)
GTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTT < SRR4302535.2554255/94‑1 (MQ=60)
TAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTC < SRR4302535.2280010/94‑1 (MQ=60)
TAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTC > SRR4302535.2680751/1‑94 (MQ=60)
TAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTC < SRR4302535.2434987/94‑1 (MQ=60)
ATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGA > SRR4302535.3858283/1‑94 (MQ=60)
ATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCCGCGTGGCTTCGC > SRR4302535.3911280/1‑94 (MQ=60)
GTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACA < SRR4302535.4208303/94‑1 (MQ=60)
GTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACA < SRR4302535.3262311/94‑1 (MQ=60)
TGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAA > SRR4302535.598950/1‑94 (MQ=60)
TGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAA > SRR4302535.3665181/1‑94 (MQ=60)
GTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAAC > SRR4302535.1463847/1‑94 (MQ=60)
CAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAA > SRR4302535.2946512/1‑94 (MQ=60)
AGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAG < SRR4302535.3615194/94‑1 (MQ=60)
GCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGG < SRR4302535.125835/94‑1 (MQ=60)
GCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCGTCGAGCGGCGTGGCTTCGACAACAAAGG > SRR4302535.4539922/1‑94 (MQ=60)
CATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGG > SRR4302535.423038/1‑94 (MQ=60)
CATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGG > SRR4302535.1451830/1‑94 (MQ=60)
CATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGG < SRR4302535.4507804/94‑1 (MQ=60)
ATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGT > SRR4302535.2747906/1‑94 (MQ=60)
ATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGT > SRR4302535.4659553/1‑94 (MQ=60)
ATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGT > SRR4302535.2649153/1‑94 (MQ=60)
TAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTG < SRR4302535.892594/94‑1 (MQ=60)
TAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCCACAACAAAGGGTG < SRR4302535.2549090/94‑1 (MQ=60)
TAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGATTCGAGCGGCGTGGCTTCGACAACAAAGGGTG < SRR4302535.3315728/94‑1 (MQ=60)
AAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGT > SRR4302535.2851337/1‑94 (MQ=60)
AAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGT > SRR4302535.2236598/1‑94 (MQ=60)
AAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGT < SRR4302535.3931535/94‑1 (MQ=60)
AAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGT < SRR4302535.4494362/94‑1 (MQ=60)
ACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCT < SRR4302535.4197286/94‑1 (MQ=60)
ACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCT < SRR4302535.4616300/94‑1 (MQ=60)
ACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCT < SRR4302535.2639354/94‑1 (MQ=60)
CGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCGTCGACAACAAAGGGTGTCTG > SRR4302535.4716241/1‑94 (MQ=60)
CGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTCGCTTCGACAACAAAGGGTGTCTG > SRR4302535.2295783/1‑94 (MQ=60)
CGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGCCGTGGCTTCGgcaataaatggtgaccg > SRR4302535.2586577/1‑77 (MQ=60)
GCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGC > SRR4302535.3229918/1‑94 (MQ=60)
GCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGC < SRR4302535.428703/94‑1 (MQ=60)
CTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGG > SRR4302535.4145553/1‑94 (MQ=60)
CTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGG > SRR4302535.1761464/1‑94 (MQ=60)
CTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGG < SRR4302535.3115177/94‑1 (MQ=60)
CTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGG > SRR4302535.2814789/1‑94 (MQ=60)
CTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGG < SRR4302535.2241178/94‑1 (MQ=60)
CTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCAGCGTGGCTTCGACAACAAAGGGCGTCTGCGG > SRR4302535.4644410/1‑94 (MQ=60)
TCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGA > SRR4302535.29056/1‑94 (MQ=60)
CAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGAT > SRR4302535.1241156/1‑94 (MQ=60)
CAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGAT < SRR4302535.2590983/94‑1 (MQ=60)
CAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGAT > SRR4302535.3345533/1‑94 (MQ=60)
CAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGAT < SRR4302535.651906/94‑1 (MQ=60)
AAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCT < SRR4302535.2110135/94‑1 (MQ=60)
AAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCT > SRR4302535.3655524/1‑94 (MQ=60)
AACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTA < SRR4302535.2747710/94‑1 (MQ=60)
AACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTA < SRR4302535.2660353/94‑1 (MQ=60)
AACCTCAAAATAACATCGTAGTTAGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTA > SRR4302535.4688794/1‑94 (MQ=60)
ACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAA > SRR4302535.4009803/1‑94 (MQ=60)
ACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAA > SRR4302535.976907/1‑94 (MQ=60)
ACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAA < SRR4302535.3145592/94‑1 (MQ=60)
TCAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCC < SRR4302535.163781/94‑1 (MQ=60)
CAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCG > SRR4302535.3463528/1‑94 (MQ=60)
CAAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCG > SRR4302535.2299893/1‑94 (MQ=60)
AAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGC > SRR4302535.1081470/1‑94 (MQ=60)
AAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGC > SRR4302535.897302/1‑94 (MQ=60)
AAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGC > SRR4302535.4222076/1‑94 (MQ=60)
AAAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGAGTGGCTTCGACAACAAAGGGAGTCTGCGGATCTAACCCGC > SRR4302535.2335181/1‑94 (MQ=60)
AAATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCG < SRR4302535.1173062/94‑1 (MQ=60)
AATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGT > SRR4302535.368809/1‑94 (MQ=60)
ATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTT > SRR4302535.3764495/1‑94 (MQ=60)
ATAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTT > SRR4302535.3224854/1‑94 (MQ=60)
TAACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTC > SRR4302535.2394109/1‑94 (MQ=60)
AACATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCG < SRR4302535.4186401/94‑1 (MQ=60)
CATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCG > SRR4302535.581273/1‑94 (MQ=60)
CATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCG > SRR4302535.3584473/1‑94 (MQ=60)
CATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGCCTGCGGCTCTAACCCGCGTTCGCG > SRR4302535.2364279/1‑94 (MQ=60)
ATCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGC > SRR4302535.174563/1‑94 (MQ=60)
TCGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCA < SRR4302535.2027795/94‑1 (MQ=60)
CGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAG < SRR4302535.139468/94‑1 (MQ=60)
CGTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAG < SRR4302535.1758814/94‑1 (MQ=60)
GTAGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGT > SRR4302535.3837160/1‑94 (MQ=60)
GGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGA > SRR4302535.1941828/1‑94 (MQ=60)
AGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGA > SRR4302535.23238/1‑94 (MQ=60)
AGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGA > SRR4302535.3976539/1‑94 (MQ=60)
AGTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGA < SRR4302535.1826367/94‑1 (MQ=60)
GTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAA < SRR4302535.4194643/94‑1 (MQ=60)
GTTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAA > SRR4302535.3916157/1‑94 (MQ=60)
TTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAG < SRR4302535.3735873/94‑1 (MQ=60)
TTGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAG < SRR4302535.3305809/94‑1 (MQ=60)
TGGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGC > SRR4302535.4239721/1‑94 (MQ=60)
GGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCC < SRR4302535.4301392/94‑1 (MQ=60)
GGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCC < SRR4302535.2809624/94‑1 (MQ=60)
GGCGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCC > SRR4302535.427575/1‑94 (MQ=60)
CGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGC < SRR4302535.700204/94‑1 (MQ=60)
CGAGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGC > SRR4302535.273148/1‑94 (MQ=60)
AGTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCAC > SRR4302535.2416017/1‑94 (MQ=60)
GTTCGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCACA < SRR4302535.153537/94‑1 (MQ=60)
CGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCACAAAC < SRR4302535.3555406/94‑1 (MQ=60)
CGCGACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCACAAAC < SRR4302535.3591016/94‑1 (MQ=60)
GACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCACAAACCCA < SRR4302535.4199427/94‑1 (MQ=60)
ACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCACAAACCCAG < SRR4302535.2624826/94‑1 (MQ=60)
ACGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCACAAACCCAG < SRR4302535.1101728/94‑1 (MQ=60)
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AGCAAAATCCGTCAGCCAGGGTGAGCGATGTAATGTGTGCAGCATAAACGCCTCAAAACCTCAAAATAACATCGTAGTTGGCGAGTTCGCGGCGTAAGGCATCTGCTTCGAGCGGCGTGGCTTCGACAACAAAGGGTGTCTGCGGATCTAACCCGCGTTCGCGCAGTGAAGCCGCACAAACCCAG > NC_000913/3472558‑3472742
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
