Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,533,160 |
A→G |
L116P (CTG→CCG) |
envZ ← |
protein histidine kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,533,160 | 0 | A | G | 100.0%
| 654.4
/ NA
| 208 | L116P (CTG→CCG) | envZ | protein histidine kinase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (113/95); total (113/95) |
Only 100 of 218 total aligned reads displayed.
CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAG > NC_000913/3533070‑3533249
|
cgTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGt < 1:3985545/93‑1 (MQ=255)
tACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtg > 2:674733/1‑93 (MQ=255)
aCCCAGATATTGGTCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc < 2:1807727/93‑1 (MQ=255)
cccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgct < 1:2893543/93‑1 (MQ=255)
ccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgctg > 2:1205366/1‑93 (MQ=255)
ccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgctg > 2:1620646/1‑93 (MQ=255)
ccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgctg > 2:2828834/1‑93 (MQ=255)
aGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcg > 2:4558701/1‑93 (MQ=255)
gATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcgc > 1:2984631/1‑93 (MQ=255)
atatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGcc > 2:3504276/1‑93 (MQ=255)
atatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGcc < 2:809886/93‑1 (MQ=255)
ttGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATc < 2:2188399/93‑1 (MQ=255)
ttGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATc < 2:3334185/93‑1 (MQ=255)
ttGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATc < 1:3998935/93‑1 (MQ=255)
cGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATg < 2:3713523/93‑1 (MQ=255)
cGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATg < 1:4131838/93‑1 (MQ=255)
cGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATg < 2:2668296/93‑1 (MQ=255)
gACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATgg < 2:1736603/93‑1 (MQ=255)
cAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCt < 2:1593633/93‑1 (MQ=255)
ccAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTaa > 1:4264615/1‑93 (MQ=255)
ccAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTaa < 1:677772/93‑1 (MQ=255)
ccAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTaa > 2:2813541/1‑93 (MQ=255)
ccAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTaa < 1:1545425/93‑1 (MQ=255)
cAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAg > 1:2916166/1‑93 (MQ=255)
cAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAg > 1:941041/1‑93 (MQ=255)
aGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGa > 1:2637774/1‑93 (MQ=255)
aGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGa > 1:1314819/1‑93 (MQ=255)
ggTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGaa > 2:2163473/1‑93 (MQ=255)
ggTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGaa > 1:776820/1‑93 (MQ=255)
gTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAt < 1:2046287/93‑1 (MQ=255)
ttttCAGTCAGACGACAGGCGAACTTTTGTTGACCTCAACGCTCACTTACGTCGGGCCGCCCGGTTGCTGCGCCATCTGGTTGCTTAAGAAtt > 2:4468387/1‑93 (MQ=255)
ttttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAtt > 2:895355/1‑93 (MQ=255)
ttttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAtt > 1:2235953/1‑93 (MQ=255)
ttttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAtt > 1:2802246/1‑93 (MQ=255)
tttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTc < 2:4451111/93‑1 (MQ=255)
ttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCa < 2:2992886/93‑1 (MQ=255)
tCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCAt < 1:3039058/93‑1 (MQ=255)
cAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATa < 2:89085/93‑1 (MQ=255)
gCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgt > 2:4062960/1‑93 (MQ=255)
gCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgt > 2:4333442/1‑93 (MQ=255)
gCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgt < 2:2636775/93‑1 (MQ=255)
cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt < 2:2557147/93‑1 (MQ=255)
cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt > 1:404658/1‑93 (MQ=255)
cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt > 1:4178152/1‑93 (MQ=255)
cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt > 1:1395944/1‑93 (MQ=255)
cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt < 1:3179367/93‑1 (MQ=255)
acgacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgc > 1:821511/1‑93 (MQ=255)
acgacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgc < 1:1175450/93‑1 (MQ=255)
gacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgcgc > 1:363051/1‑93 (MQ=255)
gacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgcgc > 2:2612623/1‑93 (MQ=255)
acAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGcc < 1:3813744/93‑1 (MQ=255)
acAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGcc > 1:1205785/1‑93 (MQ=255)
cAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGccc < 1:3502326/93‑1 (MQ=255)
aGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCa > 1:2950597/1‑93 (MQ=255)
ggCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCaa < 1:1106569/93‑1 (MQ=255)
ggCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCaa > 1:4659187/1‑93 (MQ=255)
ggCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCaa > 1:1970912/1‑93 (MQ=255)
ggCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCaa < 2:1930019/93‑1 (MQ=255)
gAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGc > 1:3122142/1‑93 (MQ=255)
gAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGc > 2:4241001/1‑93 (MQ=255)
aaCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCa > 2:1964223/1‑93 (MQ=255)
aaCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCa > 1:1845501/1‑93 (MQ=255)
aaCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCa < 2:496028/93‑1 (MQ=255)
cTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGa < 1:3341525/93‑1 (MQ=255)
cTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGa < 1:1745020/93‑1 (MQ=255)
tttGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCCACGCAGAcc > 2:1177260/1‑93 (MQ=255)
tttGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAcc < 1:212207/93‑1 (MQ=255)
tgttgACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCTCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTg < 2:2064464/93‑1 (MQ=255)
cTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTc > 1:252439/1‑93 (MQ=255)
cTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTc > 1:2098909/1‑93 (MQ=255)
cTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTc < 2:2370242/93‑1 (MQ=255)
cTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTc < 2:4612050/93‑1 (MQ=255)
tCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg < 2:944080/93‑1 (MQ=255)
aCGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCa > 2:17006/1‑93 (MQ=255)
aCGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCa > 1:2876905/1‑93 (MQ=255)
cgcgCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAg > 1:4517919/1‑93 (MQ=255)
gcgcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGGTGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGc > 1:1927476/1‑93 (MQ=255)
cgcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGcc < 2:262006/93‑1 (MQ=255)
cgcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGcc < 2:394820/93‑1 (MQ=255)
gcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCt > 1:3885939/1‑93 (MQ=255)
cACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTc < 2:4673264/93‑1 (MQ=255)
aCTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCg > 1:1073725/1‑93 (MQ=255)
cTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGt < 2:2231909/93‑1 (MQ=255)
cTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGt < 2:823187/93‑1 (MQ=255)
cTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGt > 1:3434533/1‑93 (MQ=255)
ttCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGtt > 1:601786/1‑93 (MQ=255)
ccGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTgg > 2:1512365/1‑93 (MQ=255)
cGTCGGGCCGCCCGGTTGCTCCGCCATCTGATGGCTTAAGAATTCATGGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGa < 1:1640348/93‑1 (MQ=255)
gTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAg > 2:1022231/1‑93 (MQ=255)
gTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAg > 2:3838512/1‑93 (MQ=255)
gTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAg < 2:1386854/93‑1 (MQ=255)
gTCGGGCCGCCCGGTTGCGGCGCCATCTGATGTCTTAAGAATTCATAGTGTTGCGCCCAACGCAGCCCTGCCTCTTCGGCAGCCTCGTTGGAg < 2:1081317/93‑1 (MQ=255)
tCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGt > 1:90094/1‑93 (MQ=255)
tCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGt < 2:3564458/93‑1 (MQ=255)
gggCCGCCCGGTTGCTGCCCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCAAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTag < 2:1428358/93‑1 (MQ=255)
ggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGCCCTGCCTCTTCGGCAGCCTCGTTGGAGTaga < 1:613102/93‑1 (MQ=255)
ggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTaga > 2:3476120/1‑93 (MQ=255)
gccgccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTaggg > 1:232678/1‑91 (MQ=255)
ccgccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTCGCGCCCAACGCAGTCCTGCCTCTTCGGCAGCCTCGTTCGAGTagaga < 2:632540/93‑1 (MQ=255)
gccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagagaga > 2:3247366/1‑93 (MQ=255)
|
CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAG > NC_000913/3533070‑3533249
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC > NC_000913/3533070‑3533253
|
CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTT < SRR4302535.4012783/94‑1 (MQ=60)
CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTT > SRR4302535.1722321/1‑94 (MQ=60)
ACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT > SRR4302535.2502648/1‑94 (MQ=60)
CCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTG < SRR4302535.2914009/94‑1 (MQ=60)
CCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGC > SRR4302535.1096423/1‑94 (MQ=60)
AGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGC > SRR4302535.3005566/1‑94 (MQ=60)
AGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGC > SRR4302535.2110950/1‑94 (MQ=60)
GATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCC < SRR4302535.3550109/94‑1 (MQ=60)
TATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAGCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCAT > SRR4302535.3407795/1‑94 (MQ=60)
ATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATC < SRR4302535.2864695/94‑1 (MQ=60)
TTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCT < SRR4302535.997990/94‑1 (MQ=60)
TTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCT < SRR4302535.4100561/94‑1 (MQ=60)
TTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCT < SRR4302535.4026295/94‑1 (MQ=60)
TTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCT < SRR4302535.2963429/94‑1 (MQ=60)
TTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCT < SRR4302535.2786317/94‑1 (MQ=60)
TTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCT > SRR4302535.1916382/1‑94 (MQ=60)
GGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGA > SRR4302535.2177778/1‑94 (MQ=60)
GCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATG < SRR4302535.4062589/94‑1 (MQ=60)
CGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGG < SRR4302535.4160107/94‑1 (MQ=60)
GACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGC > SRR4302535.1589770/1‑94 (MQ=60)
AGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTA > SRR4302535.789028/1‑94 (MQ=60)
AGCCAGGTTTTCAGACAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTA > SRR4302535.2297783/1‑94 (MQ=60)
GCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAA > SRR4302535.4293821/1‑94 (MQ=60)
CCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAG > SRR4302535.2936757/1‑94 (MQ=60)
CCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAG > SRR4302535.947703/1‑94 (MQ=60)
CCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAG < SRR4302535.682508/94‑1 (MQ=60)
CCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAG < SRR4302535.1556553/94‑1 (MQ=60)
CAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGA > SRR4302535.2656668/1‑94 (MQ=60)
CAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGA > SRR4302535.1324212/1‑94 (MQ=60)
AGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAA > SRR4302535.782277/1‑94 (MQ=60)
AGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAA > SRR4302535.738027/1‑94 (MQ=60)
GTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATT > SRR4302535.2822176/1‑94 (MQ=60)
GTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATT > SRR4302535.2251858/1‑94 (MQ=60)
GTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATT < SRR4302535.2061024/94‑1 (MQ=60)
GTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATT < SRR4302535.3838515/94‑1 (MQ=60)
GTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCCGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTCAGAATT > SRR4302535.1194025/1‑94 (MQ=60)
TCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATA < SRR4302535.3060341/94‑1 (MQ=60)
CAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAG < SRR4302535.2129184/94‑1 (MQ=60)
AGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGT > SRR4302535.3134061/1‑94 (MQ=60)
GCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTG < SRR4302535.391895/94‑1 (MQ=60)
CCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGT > SRR4302535.4202162/1‑94 (MQ=60)
CCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGT > SRR4302535.407491/1‑94 (MQ=60)
CCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGT > SRR4302535.4206753/1‑94 (MQ=60)
CCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGT > SRR4302535.918714/1‑94 (MQ=60)
CCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGT > SRR4302535.1405914/1‑94 (MQ=60)
CAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTT < SRR4302535.3201349/94‑1 (MQ=60)
CAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTT > SRR4302535.1987960/1‑94 (MQ=60)
CAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTT > SRR4302535.753690/1‑94 (MQ=60)
AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG < SRR4302535.841470/94‑1 (MQ=60)
GACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGC > SRR4302535.827272/1‑94 (MQ=60)
ACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCG < SRR4302535.1183841/94‑1 (MQ=60)
CGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGC < SRR4302535.4339543/94‑1 (MQ=60)
CGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGC > SRR4302535.365552/1‑94 (MQ=60)
GACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCC > SRR4302535.1214447/1‑94 (MQ=60)
ACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCC < SRR4302535.3840060/94‑1 (MQ=60)
CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCA > SRR4302535.1827959/1‑94 (MQ=60)
CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCA < SRR4302535.3526670/94‑1 (MQ=60)
CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCA > SRR4302535.2971325/1‑94 (MQ=60)
AGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAA > SRR4302535.1985107/1‑94 (MQ=60)
AGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAA > SRR4302535.4690703/1‑94 (MQ=60)
GGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAAC < SRR4302535.3003132/94‑1 (MQ=60)
GGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAAC < SRR4302535.1114473/94‑1 (MQ=60)
CGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGC > SRR4302535.3143885/1‑94 (MQ=60)
GAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCA > SRR4302535.1858801/1‑94 (MQ=60)
tacttttattcccctccacaccCACTTCCGGCGGGCCGACCGGTTGCTACACAATCTGATGAATTAAGAATTCATAGTGTTGCGCCCAACGCAG < SRR4302535.4719797/72‑1 (MQ=24)
AACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAG < SRR4302535.1533640/94‑1 (MQ=60)
ACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGA > SRR4302535.1512881/1‑94 (MQ=60)
CTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAC < SRR4302535.3364805/94‑1 (MQ=60)
CTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAC < SRR4302535.1757647/94‑1 (MQ=60)
TTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCT < SRR4302535.213665/94‑1 (MQ=60)
TTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCT < SRR4302535.2631846/94‑1 (MQ=60)
TTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTG > SRR4302535.614724/1‑94 (MQ=60)
GACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCT > SRR4302535.586601/1‑94 (MQ=60)
ACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTT < SRR4302535.4004311/94‑1 (MQ=60)
CCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTC > SRR4302535.2114047/1‑94 (MQ=60)
CCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTC < SRR4302535.2490005/94‑1 (MQ=60)
CCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTC > SRR4302535.254179/1‑94 (MQ=60)
CCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGCTGCGCCCAACGCAGACCTGCCTCTTC > SRR4302535.1150522/1‑94 (MQ=60)
CTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCG < SRR4302535.621795/94‑1 (MQ=60)
CTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCG > SRR4302535.4014480/1‑94 (MQ=60)
CTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCG < SRR4302535.3347677/94‑1 (MQ=60)
CACCGCGCACTTCCGTCGGGCCGCCCGGTGGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGC < SRR4302535.2012072/94‑1 (MQ=60)
CAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGC > SRR4302535.3197136/1‑94 (MQ=60)
AACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCA > SRR4302535.2897281/1‑94 (MQ=60)
ACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAG > SRR4302535.4548885/1‑94 (MQ=60)
CGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGGTGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGC > SRR4302535.1941368/1‑94 (MQ=60)
CGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCT > SRR4302535.3912595/1‑94 (MQ=60)
GCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTC < SRR4302535.3481510/94‑1 (MQ=60)
CACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCG > SRR4302535.1081362/1‑94 (MQ=60)
CACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCG > SRR4302535.290432/1‑94 (MQ=60)
CACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTATTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCG > SRR4302535.2925330/1‑94 (MQ=60)
ACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGT > SRR4302535.4245511/1‑94 (MQ=60)
ACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGT > SRR4302535.3458403/1‑94 (MQ=60)
CTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT > SRR4302535.4290791/1‑94 (MQ=60)
CTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT > SRR4302535.1218037/1‑94 (MQ=60)
CTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT > SRR4302535.605995/1‑94 (MQ=60)
CGTCGGGCCGCCCGGTTGCTCCGCCATCTGATGGCTTAAGAATTCATGGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAG < SRR4302535.1652207/94‑1 (MQ=60)
GTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGT > SRR4302535.90729/1‑94 (MQ=60)
CGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAG < SRR4302535.3049264/94‑1 (MQ=60)
CGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAG > SRR4302535.3877212/1‑94 (MQ=60)
CGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAG > SRR4302535.1335290/1‑94 (MQ=60)
GGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGCCCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAG < SRR4302535.617365/94‑1 (MQ=60)
GGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGGG > SRR4302535.234283/1‑94 (MQ=60)
GGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAG < SRR4302535.3283440/94‑1 (MQ=60)
CGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGA < SRR4302535.2964690/94‑1 (MQ=60)
CGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGA < SRR4302535.4594112/94‑1 (MQ=60)
GCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAG > SRR4302535.1983311/1‑94 (MQ=60)
CCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGA > SRR4302535.3004655/1‑94 (MQ=60)
CCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGAT < SRR4302535.470449/94‑1 (MQ=60)
CCGGTTGCTGCCCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGAT < SRR4302535.1144445/94‑1 (MQ=60)
CGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATC < SRR4302535.1560331/94‑1 (MQ=60)
GGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC > SRR4302535.3603313/1‑94 (MQ=60)
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CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC > NC_000913/3533070‑3533253
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
