Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,602,962 |
A→G |
Y94H (TAC→CAC) |
yhhM ← |
putative receptor |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,602,962 | 0 | A | G | 99.6%
| 777.4
/ ‑5.2
| 250 | Y94H (TAC→CAC) | yhhM | putative receptor |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (150/98); total (151/99) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-01 |
Only 100 of 267 total aligned reads displayed.
AAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCGGAG > NC_000913/3602872‑3603051
|
aaaTAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGtgctgc > 2:1248445/1‑93 (MQ=255)
aaaTAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTCTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGtgctgc > 1:1852312/1‑93 (MQ=255)
aaTAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTgctgct < 1:3222057/93‑1 (MQ=255)
aaTAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTgctgct > 1:2140387/1‑93 (MQ=255)
aaTAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCCTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTgctgct > 2:1857386/1‑93 (MQ=255)
aTAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGctgctg > 1:2935807/1‑93 (MQ=255)
aTAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGctgctg > 2:3963307/1‑93 (MQ=255)
tAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTgg > 2:1094460/1‑93 (MQ=255)
aaCCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTggg > 2:2138102/1‑93 (MQ=255)
ccTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCTCTGTCAGGGCGTGGTGCTGCTGGGCg < 2:3552347/93‑1 (MQ=255)
cTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGt > 1:4423881/1‑93 (MQ=255)
cTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGt < 2:3693738/93‑1 (MQ=255)
cTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGCGGTGCTGCTGGGCGt > 1:3688645/1‑93 (MQ=255)
ttATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTc > 1:946123/1‑93 (MQ=255)
ttATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTc > 1:1903258/1‑93 (MQ=255)
tATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCg > 1:4090286/1‑93 (MQ=255)
tATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCg > 2:3388889/1‑93 (MQ=255)
tATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCg > 2:4350200/1‑93 (MQ=255)
aTTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGa < 2:3010441/93‑1 (MQ=255)
aTTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGa < 2:655059/93‑1 (MQ=255)
aTTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGa > 1:3117026/1‑93 (MQ=255)
aTTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGa < 1:1268962/93‑1 (MQ=255)
ttGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAg > 1:3610035/1‑93 (MQ=255)
tGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAgg > 2:4549946/1‑93 (MQ=255)
tGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAgg < 2:2279709/93‑1 (MQ=255)
tGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAgg > 1:3466235/1‑93 (MQ=255)
gTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGc > 1:1307640/1‑93 (MQ=255)
gTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGc > 2:1437583/1‑93 (MQ=255)
ttCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCg > 1:2407627/1‑93 (MQ=255)
tCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGa > 2:2410433/1‑93 (MQ=255)
gCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGaaa > 1:3452680/1‑93 (MQ=255)
gCCTACAAAGCTGACAAAGCGCGTTCCTGTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGaaa < 1:4494214/93‑1 (MQ=255)
ccTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAAc > 1:4353228/1‑93 (MQ=255)
cTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACg > 2:3414026/1‑93 (MQ=255)
cTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACg > 1:3908888/1‑93 (MQ=255)
cTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACg > 2:4633034/1‑93 (MQ=255)
tACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGt > 1:1008106/1‑93 (MQ=255)
tACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGt < 2:4240679/93‑1 (MQ=255)
aCAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTc < 1:2308519/93‑1 (MQ=255)
aCAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGCGCGTCGCGGCGAAACGTc > 1:2094395/1‑93 (MQ=255)
cAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCt > 2:933890/1‑93 (MQ=255)
aaGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGc < 2:331517/93‑1 (MQ=255)
aaGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGc > 1:620599/1‑93 (MQ=255)
aGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAATCGtcttct < 2:4551176/93‑1 (MQ=255)
gCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTc > 2:4251971/1‑93 (MQ=255)
tGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCa < 1:2969216/93‑1 (MQ=255)
gACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCAt > 2:2176748/1‑93 (MQ=255)
gACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCAt < 2:4289587/93‑1 (MQ=255)
aCAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCAtt > 1:136135/1‑93 (MQ=255)
cAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTAAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATtc < 2:4397811/93‑1 (MQ=255)
aGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATtcctc < 1:2977999/93‑1 (MQ=255)
aGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATtcctc < 1:1735821/93‑1 (MQ=255)
cgcgTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCg > 1:3010636/1‑93 (MQ=255)
gTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCtt > 2:1909255/1‑93 (MQ=255)
tCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTg > 2:1222855/1‑93 (MQ=255)
tCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTg < 2:247348/93‑1 (MQ=255)
tCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTg > 2:1697415/1‑93 (MQ=255)
tCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTg > 1:2612880/1‑93 (MQ=255)
ccTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGc < 2:3854706/93‑1 (MQ=255)
ccTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGc < 1:3259743/93‑1 (MQ=255)
cTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCg < 1:650381/93‑1 (MQ=255)
tttATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCgg > 2:4477275/1‑93 (MQ=255)
tttATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCgg > 1:817982/1‑93 (MQ=255)
tttATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCgg > 1:204799/1‑93 (MQ=255)
ttATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGt > 1:2544071/1‑93 (MQ=255)
ttATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGt > 1:1919047/1‑93 (MQ=255)
tataGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGtt < 2:184262/93‑1 (MQ=255)
tataGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGtt > 1:3852114/1‑93 (MQ=255)
tataGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGtt < 2:3519501/93‑1 (MQ=255)
ataGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGttt > 1:991097/1‑93 (MQ=255)
aGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGa < 1:1535922/93‑1 (MQ=255)
aGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGa < 1:2846369/93‑1 (MQ=255)
gCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGaa > 2:53299/1‑93 (MQ=255)
cTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAg < 1:1051220/93‑1 (MQ=255)
tCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTTAAgg > 2:179183/1‑92 (MQ=255)
tCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGc > 2:2576308/1‑93 (MQ=255)
tCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGc > 1:1600905/1‑93 (MQ=255)
tCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGc < 1:3820753/93‑1 (MQ=255)
tACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCt > 1:4306696/1‑93 (MQ=255)
tACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCt < 1:2026748/93‑1 (MQ=255)
aCCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTc > 1:487282/1‑93 (MQ=255)
ttATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAg < 1:4638556/93‑1 (MQ=255)
ttATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAg < 2:2925678/93‑1 (MQ=255)
tCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGt > 2:1544118/1‑93 (MQ=255)
gCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAGGCTTGCCTCATAGCGtat > 1:1656157/1‑93 (MQ=255)
cccACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACATCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGtata > 1:3305657/1‑93 (MQ=255)
ccACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGtatat > 2:2734108/1‑92 (MQ=255)
ccACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATAc > 1:274716/1‑93 (MQ=255)
cACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACt < 2:4107736/93‑1 (MQ=255)
cACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACt < 1:4239504/93‑1 (MQ=255)
aCTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTg > 1:3631637/1‑93 (MQ=255)
aCTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTg > 1:3752984/1‑93 (MQ=255)
aCTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTg > 2:3776393/1‑93 (MQ=255)
tGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGt < 2:3129396/93‑1 (MQ=255)
tGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGt < 1:3928153/93‑1 (MQ=255)
cAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGtgcc > 2:1601730/1‑93 (MQ=255)
aGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGtgcct < 1:3505914/93‑1 (MQ=255)
ggCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGtgcctgc > 2:803345/1‑93 (MQ=255)
cGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCg < 2:3158355/93‑1 (MQ=255)
tGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCGGa < 1:4173893/93‑1 (MQ=255)
|
AAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCGGAG > NC_000913/3602872‑3603051
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCGGAGTC > NC_000913/3602869‑3603053
|
TTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTG > SRR4302535.3281089/1‑94 (MQ=60)
AAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCT < SRR4302535.582797/94‑1 (MQ=60)
AAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCT < SRR4302535.1988136/94‑1 (MQ=60)
AAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCT < SRR4302535.4198034/94‑1 (MQ=60)
AAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTG > SRR4302535.1700315/1‑94 (MQ=60)
AAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTG < SRR4302535.480024/94‑1 (MQ=60)
AAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTG > SRR4302535.3900259/1‑94 (MQ=60)
AAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGC > SRR4302535.1795782/1‑94 (MQ=60)
AAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGC > SRR4302535.2051145/1‑94 (MQ=60)
AAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTCTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGC > SRR4302535.1865657/1‑94 (MQ=60)
AAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCT > SRR4302535.2559212/1‑94 (MQ=60)
AAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCT < SRR4302535.3012345/94‑1 (MQ=60)
AAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCT > SRR4302535.2155797/1‑94 (MQ=60)
AAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCT > SRR4302535.3489684/1‑94 (MQ=60)
AATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTG > SRR4302535.2956467/1‑94 (MQ=60)
AATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTG < SRR4302535.3244388/94‑1 (MQ=60)
AATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTG > SRR4302535.130265/1‑94 (MQ=60)
AATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTG < SRR4302535.2647261/94‑1 (MQ=60)
AACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGC > SRR4302535.3215778/1‑94 (MQ=60)
CCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGT > SRR4302535.4454179/1‑94 (MQ=60)
CCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGT > SRR4302535.3273526/1‑94 (MQ=60)
CCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGT > SRR4302535.673754/1‑94 (MQ=60)
CCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGT > SRR4302535.98604/1‑94 (MQ=60)
CCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGCGGTGCTGCTGGGCGT > SRR4302535.3714172/1‑94 (MQ=60)
CTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTC > SRR4302535.952827/1‑94 (MQ=60)
CTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTC > SRR4302535.1916956/1‑94 (MQ=60)
TTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCG > SRR4302535.4118273/1‑94 (MQ=60)
TATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGA > SRR4302535.3138726/1‑94 (MQ=60)
TATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGAACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGA > SRR4302535.4377017/1‑94 (MQ=60)
ATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAG > SRR4302535.1905371/1‑94 (MQ=60)
ATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAG > SRR4302535.3635072/1‑94 (MQ=60)
ATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAG < SRR4302535.1278033/94‑1 (MQ=60)
ATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAG < SRR4302535.3610943/94‑1 (MQ=60)
TTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGG > SRR4302535.3490320/1‑94 (MQ=60)
TGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGC > SRR4302535.1316980/1‑94 (MQ=60)
GTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCG > SRR4302535.2424956/1‑94 (MQ=60)
CGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAA > SRR4302535.4280192/1‑94 (MQ=60)
CGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAA > SRR4302535.3476679/1‑94 (MQ=60)
GCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAAC < SRR4302535.1854348/94‑1 (MQ=60)
GCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAAC > SRR4302535.4383019/1‑94 (MQ=60)
GCCTACAAAGCTGACAAAGCGCGTTCCTGTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAAC < SRR4302535.4525063/94‑1 (MQ=60)
CCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACG > SRR4302535.2366379/1‑94 (MQ=60)
CCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACG > SRR4302535.3935660/1‑94 (MQ=60)
CCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACG > SRR4302535.2304905/1‑94 (MQ=60)
CCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACG > SRR4302535.2993656/1‑94 (MQ=60)
CTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGGGAAACGT > SRR4302535.3646070/1‑94 (MQ=60)
CTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGT > SRR4302535.1015269/1‑94 (MQ=60)
CTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGT > SRR4302535.2645404/1‑94 (MQ=60)
CTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGT > SRR4302535.4285246/1‑94 (MQ=60)
TACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTC < SRR4302535.4605791/94‑1 (MQ=60)
TACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGCGCGTCGCGGCGAAACGTC > SRR4302535.2109495/1‑94 (MQ=60)
ACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCT > SRR4302535.3511986/1‑94 (MQ=60)
ACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCT < SRR4302535.1992200/94‑1 (MQ=60)
ACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCT < SRR4302535.2325041/94‑1 (MQ=60)
CAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTG > SRR4302535.3612721/1‑94 (MQ=60)
CAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTG > SRR4302535.3518560/1‑94 (MQ=60)
CAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGCCGAGGCGAAACGTCTG > SRR4302535.1595375/1‑94 (MQ=60)
AAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGC > SRR4302535.209542/1‑94 (MQ=60)
AAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGC > SRR4302535.624912/1‑94 (MQ=60)
AAGCTGACAAAGCGCGTTCCTTTATAGCTCGGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCT < SRR4302535.3452920/94‑1 (MQ=60)
AAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCT > SRR4302535.3858394/1‑94 (MQ=60)
AAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCT < SRR4302535.1338869/94‑1 (MQ=60)
TGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCAT > SRR4302535.3941310/1‑94 (MQ=60)
TGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCAT > SRR4302535.2119033/1‑94 (MQ=60)
TGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCAT < SRR4302535.2990052/94‑1 (MQ=60)
GACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATT > SRR4302535.137085/1‑94 (MQ=60)
GACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATT > SRR4302535.191915/1‑94 (MQ=60)
CAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCC > SRR4302535.1110505/1‑94 (MQ=60)
AAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTAGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCT > SRR4302535.4029994/1‑94 (MQ=60)
AGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCC < SRR4302535.2998890/94‑1 (MQ=60)
AGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCC < SRR4302535.1748368/94‑1 (MQ=60)
GCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCG < SRR4302535.3332071/94‑1 (MQ=60)
GCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCG > SRR4302535.4160423/1‑94 (MQ=60)
GCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCG > SRR4302535.3031724/1‑94 (MQ=60)
GCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTCGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCG < SRR4302535.2530413/94‑1 (MQ=60)
CGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTT > SRR4302535.4669793/1‑94 (MQ=60)
CGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTT > SRR4302535.1570360/1‑94 (MQ=60)
CGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTT > SRR4302535.3830283/1‑94 (MQ=60)
GTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTT > SRR4302535.52443/1‑94 (MQ=60)
GTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTT > SRR4302535.2778820/1‑94 (MQ=60)
TTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTG > SRR4302535.2631621/1‑94 (MQ=60)
CCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCG > SRR4302535.3743192/1‑94 (MQ=60)
CCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCG < SRR4302535.3282398/94‑1 (MQ=60)
CCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCG > SRR4302535.3848233/1‑94 (MQ=60)
CCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCG > SRR4302535.4196897/1‑94 (MQ=60)
CTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGG < SRR4302535.654919/94‑1 (MQ=60)
CTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGG > SRR4302535.823721/1‑94 (MQ=60)
CTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGG > SRR4302535.1017994/1‑94 (MQ=60)
CTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGG > SRR4302535.1652490/1‑94 (MQ=60)
CTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGG > SRR4302535.206205/1‑94 (MQ=60)
TTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGT > SRR4302535.2562390/1‑94 (MQ=60)
TTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGT > SRR4302535.1932878/1‑94 (MQ=60)
TTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGT > SRR4302535.626171/1‑94 (MQ=60)
TTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTT > SRR4302535.3878618/1‑94 (MQ=60)
TTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTT > SRR4302535.858070/1‑94 (MQ=60)
TATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTT > SRR4302535.998130/1‑94 (MQ=60)
ATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTG < SRR4302535.3702472/94‑1 (MQ=60)
ATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTG < SRR4302535.4393449/94‑1 (MQ=60)
AGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAA < SRR4302535.1546988/94‑1 (MQ=60)
AGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAA < SRR4302535.2866549/94‑1 (MQ=60)
AGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAA > SRR4302535.1165603/1‑94 (MQ=60)
AGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAA < SRR4302535.3722959/94‑1 (MQ=60)
GCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAG < SRR4302535.2980190/94‑1 (MQ=60)
CTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGC < SRR4302535.1058696/94‑1 (MQ=60)
CTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGC > SRR4302535.1612454/1‑94 (MQ=60)
TCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCT < SRR4302535.3847113/94‑1 (MQ=60)
CAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTT < SRR4302535.3183895/94‑1 (MQ=60)
GCGTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGC > SRR4302535.2089402/1‑94 (MQ=60)
GTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCNNTTTGCGGTTTGAANNTNGNCT > SRR4302535.4464450/1‑94 (MQ=60)
GTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCT > SRR4302535.4336160/1‑94 (MQ=60)
GTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCT < SRR4302535.1501971/94‑1 (MQ=60)
CTACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCT < SRR4302535.867526/94‑1 (MQ=60)
TACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTC > SRR4302535.490699/1‑94 (MQ=60)
TACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTC > SRR4302535.4341850/1‑94 (MQ=60)
TACCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTC < SRR4302535.2041350/94‑1 (MQ=60)
ACCTTTATCGCCCACTGTCAGGGTGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCA < SRR4302535.4247149/94‑1 (MQ=60)
CCTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCAT > SRR4302535.4512129/1‑94 (MQ=60)
CTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATA > SRR4302535.2346349/1‑94 (MQ=60)
CTTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATA > SRR4302535.1294811/1‑94 (MQ=60)
TTTATCGCCCGCTGTCAGGGTGTGGTGCTGCTGGGCGTCGAGGCTAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAG < SRR4302535.3662609/94‑1 (MQ=60)
TTTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAG > SRR4302535.1923141/1‑94 (MQ=60)
TTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGC < SRR4302535.4670016/94‑1 (MQ=60)
TTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGC > SRR4302535.3917783/1‑94 (MQ=60)
TTATCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCCCATATC > SRR4302535.3288391/1‑94 (MQ=60)
TCGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTA > SRR4302535.261062/1‑94 (MQ=60)
CGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAGGCTTGCCTCATAGCGTAT > SRR4302535.1668136/1‑94 (MQ=60)
CGCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGACTCATAGCGGAT > SRR4302535.3124162/1‑94 (MQ=60)
GCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATA < SRR4302535.3039526/94‑1 (MQ=60)
GCCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACATCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATA > SRR4302535.3328659/1‑94 (MQ=60)
CCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATAC < SRR4302535.1949543/94‑1 (MQ=60)
CCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATAC < SRR4302535.534525/94‑1 (MQ=60)
CCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATAC < SRR4302535.986286/94‑1 (MQ=60)
CCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATAC < SRR4302535.2894178/94‑1 (MQ=60)
CCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATAC < SRR4302535.3300015/94‑1 (MQ=60)
CCCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATAC > SRR4302535.276628/1‑94 (MQ=60)
CCACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACT < SRR4302535.4014767/94‑1 (MQ=60)
CACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTG > SRR4302535.2117838/1‑94 (MQ=60)
CACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTG < SRR4302535.4268524/94‑1 (MQ=60)
CACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTG > SRR4302535.3778955/1‑94 (MQ=60)
CACTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTG > SRR4302535.3656811/1‑94 (MQ=60)
CTGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGT < SRR4302535.1686440/94‑1 (MQ=60)
TGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTG < SRR4302535.445885/94‑1 (MQ=60)
TGTCAGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTG < SRR4302535.3954984/94‑1 (MQ=60)
AGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTG > SRR4302535.1535921/1‑94 (MQ=60)
AGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTG > SRR4302535.2994791/1‑94 (MQ=60)
AGGGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTG < SRR4302535.3530281/94‑1 (MQ=60)
GGCGTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCC > SRR4302535.283223/1‑94 (MQ=60)
GTGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCGGG > SRR4302535.626650/1‑94 (MQ=60)
TGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCGGAG < SRR4302535.4202460/94‑1 (MQ=60)
TGGTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCGGAG < SRR4302535.2980799/94‑1 (MQ=60)
GTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCGGAGTC > SRR4302535.2126969/1‑94 (MQ=60)
GTGCTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCGGAGTC > SRR4302535.3174706/1‑94 (MQ=60)
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TTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGCGTCGAGGCGAAACGTCTGCTCCATTCCTCCGCTTTGCGGTTTGAAGCTTGCCTCATAGCGTATACTGGTGCCTGCCGGAGTC > NC_000913/3602869‑3603053
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |