Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,700,443 |
(T)6→7 |
coding (55/1005 nt) |
dppF ← |
putative ATP‑binding component of dipeptide transport system |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,700,437 | 1 | . | T | 96.6%
| 837.4
/ 17.3
| 238 | coding (61/1005 nt) | dppF | putative ATP‑binding component of dipeptide transport system |
| Reads supporting (aligned to +/- strand): ref base . (4/4); new base T (133/97); total (137/101) |
| Fisher's exact test for biased strand distribution p-value = 7.25e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 281 total aligned reads displayed.
CAGCGTTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGT > NC_000913/3700345‑3700524
|
cAGCGTTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATg < 2:2739096/93‑1 (MQ=255)
cAGCGTTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATg > 1:1712644/1‑93 (MQ=255)
aGCGTTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑t > 2:3007104/1‑93 (MQ=255)
aGCGTTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑t > 1:1016399/1‑93 (MQ=255)
gCGTTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt < 1:1031229/93‑1 (MQ=255)
gCGTTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt < 2:3026834/93‑1 (MQ=255)
gCGTTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt < 2:1809459/93‑1 (MQ=255)
cGTTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt‑t < 2:429691/93‑1 (MQ=255)
ttttGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt‑ttt > 2:2055965/1‑93 (MQ=255)
ttttGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt‑ttt < 2:1040060/93‑1 (MQ=255)
ttttGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt‑ttt > 1:2539482/1‑93 (MQ=255)
tGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt‑tttttc < 2:1654029/93‑3 (MQ=255)
gCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt‑tttttca > 2:454042/1‑90 (MQ=255)
gCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt‑tttttca < 2:2595979/93‑4 (MQ=255)
gCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt‑tttttca < 1:2124252/93‑4 (MQ=255)
ccACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt‑tttttcag < 2:129213/93‑5 (MQ=255)
ccACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑tt‑tttttcag > 2:2818049/1‑89 (MQ=255)
aCGTTCAAGGTTAAACGAAACGCCATCCAGCGCGTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGt > 2:1973705/1‑93 (MQ=255)
cGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTc < 2:1668566/93‑1 (MQ=255)
cGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTc > 2:3340310/1‑93 (MQ=255)
cGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTc > 1:2053156/1‑93 (MQ=255)
ttCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCTGATAATGTTT‑TTTT‑CAGGTCGa < 1:3452124/93‑1 (MQ=255)
tCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGAt > 2:2149780/1‑93 (MQ=255)
cAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATa < 2:1943304/93‑1 (MQ=255)
cAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATa < 2:1539695/93‑1 (MQ=255)
aGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGc < 1:1785213/93‑1 (MQ=255)
gTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCt < 2:3388440/93‑1 (MQ=255)
gaaacgCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAg < 2:3868913/93‑1 (MQ=255)
gaaacgCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAg > 2:3195378/1‑93 (MQ=255)
aaacgCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGc < 1:4116371/93‑1 (MQ=255)
aaacgCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGc < 2:3644528/93‑1 (MQ=255)
aaacgCCACCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGc < 2:3101073/93‑1 (MQ=255)
aacgCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCg > 2:3738022/1‑93 (MQ=255)
cgCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgt > 1:3203568/1‑93 (MQ=255)
gCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgtt < 2:1726775/93‑1 (MQ=255)
gCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgtt < 2:2294758/93‑1 (MQ=255)
gCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgtt < 1:2912764/93‑1 (MQ=255)
gCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgtt > 1:1974134/1‑93 (MQ=255)
gCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgtt < 1:3221449/93‑1 (MQ=255)
ccATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgttg < 1:4622254/93‑1 (MQ=255)
ccATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgttg < 1:1615719/93‑1 (MQ=255)
cATCCAGCGCTTTAGCCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgttgt < 2:266314/93‑1 (MQ=255)
cATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgttgt > 2:1904772/1‑93 (MQ=255)
aTCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgttgtt > 1:2414426/1‑93 (MQ=255)
aTCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGgttgtt < 2:4079400/93‑1 (MQ=255)
aGCGCGTTAACCAGACGTTCCGGCGCGAACATGCCGTTCTTCACCGGATAATT‑TT‑TTTTGCAGGTCGATAGCCTGCAACAGCGGTTGTTGCAg < 1:2788774/93‑1 (MQ=255)
gcgcTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAgg > 1:444179/1‑93 (MQ=255)
gcgcTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAgg > 1:1393127/1‑93 (MQ=255)
gcgcTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAgg < 1:2823930/93‑1 (MQ=255)
cgcTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAggg < 1:1843634/93‑1 (MQ=255)
gcTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGt < 2:1853491/93‑1 (MQ=255)
cTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTg > 1:3987419/1‑93 (MQ=255)
cTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTg > 1:374577/1‑93 (MQ=255)
aaCCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCct > 1:3112717/1‑93 (MQ=255)
ccAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCctct < 1:81819/93‑1 (MQ=255)
aGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTg > 1:3571831/1‑93 (MQ=255)
gTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTa > 2:3512687/1‑93 (MQ=255)
gTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTa > 2:4395651/1‑93 (MQ=255)
ttCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTAc > 2:737833/1‑93 (MQ=255)
ttCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTAc < 1:3003860/93‑1 (MQ=255)
tCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACt > 1:4615786/1‑93 (MQ=255)
ccGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTc > 2:4634102/1‑93 (MQ=255)
cGGCGCGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCa < 1:4070372/93‑1 (MQ=255)
gcgcGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATa < 1:880905/93‑1 (MQ=255)
gcgcGAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATa < 1:9685/93‑1 (MQ=255)
gAACATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAgtgt > 1:1565590/1‑93 (MQ=255)
aaCATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGTTGGCCTCTTGCGTACTCATAGTGTc < 2:970903/93‑1 (MQ=255)
aaCATGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTc < 2:1997826/93‑1 (MQ=255)
aTGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGc > 1:3127094/1‑93 (MQ=255)
aTGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGc < 2:881855/93‑1 (MQ=255)
aTGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGc > 2:421979/1‑93 (MQ=255)
aTGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGc > 2:424906/1‑93 (MQ=255)
aTGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGc > 2:546706/1‑93 (MQ=255)
aTGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGc > 1:607655/1‑93 (MQ=255)
aTGCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGACTCTTGCGTACTCATAGTGTCGGc > 2:2266573/1‑93 (MQ=255)
gCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCt < 1:1256024/93‑1 (MQ=255)
gCCTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCt > 1:4664423/1‑93 (MQ=255)
ccTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTc > 1:3918366/1‑93 (MQ=255)
ccTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTc < 2:1275199/93‑1 (MQ=255)
cTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCCGGGTGGCCTCTTGCGTACTCATAGTGTCGGGCTcc > 1:75243/1‑93 (MQ=255)
cTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTcc > 1:1480735/1‑93 (MQ=255)
cTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTcc > 1:4270437/1‑93 (MQ=255)
cTTTCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTcc > 1:2570801/1‑93 (MQ=255)
tttCTTCACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTccc < 2:636654/93‑1 (MQ=255)
cttcACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGc > 1:2734308/1‑93 (MQ=255)
ttcACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGca > 1:3673278/1‑93 (MQ=255)
ttcACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGca > 1:1948364/1‑93 (MQ=255)
ttcACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGca < 1:4364285/93‑1 (MQ=255)
ttcACCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGca > 1:486396/1‑93 (MQ=255)
aCCGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGcatca < 2:2344477/93‑1 (MQ=255)
tcGGATAATG‑TTGTTTT‑CAGGTCGCTAGCCTGCAACAGCGGTTGTTGCAGGCTGACCTTTTGCGTACTCATATTGTCGGCCTCCCGGcatcat < 2:1379909/92‑1 (MQ=255)
ccGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGcatcat > 1:708205/1‑93 (MQ=255)
cGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCatcatc < 1:263242/93‑1 (MQ=255)
cGGATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCatcatc > 1:1880558/1‑93 (MQ=255)
ggATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCAtcatca > 1:1123286/1‑93 (MQ=255)
ggATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCAtcatca < 2:118367/93‑1 (MQ=255)
gATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCaa < 1:3932706/93‑1 (MQ=255)
gATAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCaa < 1:1522520/93‑1 (MQ=255)
aTAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAg > 2:2951346/1‑93 (MQ=255)
tAATGTTT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGt < 2:1512621/93‑1 (MQ=255)
|
CAGCGTTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TT‑TTTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGT > NC_000913/3700345‑3700524
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCA > NC_000913/3700350‑3700535
|
TTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TTT‑TTT < SRR4302535.4325188/94‑1 (MQ=60)
TTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TTT‑TTT < SRR4302535.1903825/94‑1 (MQ=60)
TTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TTT‑TTT < SRR4302535.4652652/94‑1 (MQ=60)
TTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TTT‑TTT‑T > SRR4302535.2092936/1‑94 (MQ=60)
GCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAG < SRR4302535.4668364/94‑1 (MQ=60)
GCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAG < SRR4302535.2645795/94‑1 (MQ=60)
GCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAG < SRR4302535.2139563/94‑1 (MQ=60)
GCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAG > SRR4302535.583939/1‑94 (MQ=60)
CCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGGCTTTCTTCACCGGATAATG‑TTT‑TTT‑CAGGT > SRR4302535.1498841/1‑94 (MQ=60)
CCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGG < SRR4302535.3566075/94‑1 (MQ=60)
CCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGG < SRR4302535.3086444/94‑1 (MQ=60)
CCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGG < SRR4302535.1172286/94‑1 (MQ=60)
CCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGG > SRR4302535.777587/1‑94 (MQ=60)
CACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGT < SRR4302535.2894427/94‑1 (MQ=60)
CACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGT < SRR4302535.1547453/94‑1 (MQ=60)
ACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTC > SRR4302535.2067945/1‑94 (MQ=60)
CGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCG < SRR4302535.3242153/94‑1 (MQ=60)
GTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGA > SRR4302535.3940828/1‑94 (MQ=60)
TTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCTGATAATGTTTT‑TTT‑CAGGTCGAT < SRR4302535.3476119/94‑1 (MQ=60)
TTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGAT < SRR4302535.4338668/94‑1 (MQ=60)
TCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATA < SRR4302535.2633265/94‑1 (MQ=60)
TCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATA < SRR4302535.1909112/94‑1 (MQ=60)
CAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAG < SRR4302535.13820/94‑1 (MQ=60)
CAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAG > SRR4302535.464704/1‑94 (MQ=60)
AAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGC < SRR4302535.1539431/94‑1 (MQ=60)
AGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCC < SRR4302535.1798132/94‑1 (MQ=60)
GGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCT > SRR4302535.1167630/1‑94 (MQ=60)
GTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTG > SRR4302535.4606804/1‑94 (MQ=60)
ACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACA > SRR4302535.3136244/1‑94 (MQ=60)
ACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TTT‑TTT‑CAGGTCGATAGCCTGCAACAG < SRR4302535.3708473/94‑1 (MQ=60)
GAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGC < SRR4302535.4112670/94‑1 (MQ=60)
AAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCG > SRR4302535.2785540/1‑94 (MQ=60)
AAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCG < SRR4302535.4144546/94‑1 (MQ=60)
AAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCG > SRR4302535.4463316/1‑94 (MQ=60)
AACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGG > SRR4302535.1877292/1‑94 (MQ=60)
AACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGG < SRR4302535.3954138/94‑1 (MQ=60)
ACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGT > SRR4302535.3225754/1‑94 (MQ=60)
CGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTT > SRR4302535.4446408/1‑94 (MQ=60)
CGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTT < SRR4302535.1106246/94‑1 (MQ=60)
CGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTT > SRR4302535.1988351/1‑94 (MQ=60)
GCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTG < SRR4302535.3243772/94‑1 (MQ=60)
GCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTG < SRR4302535.2933342/94‑1 (MQ=60)
CCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTG < SRR4302535.1418971/94‑1 (MQ=60)
CCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAatctgtatccgcggtttt > SRR4302535.3709957/1‑76 (MQ=60)
CCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGT < SRR4302535.249788/94‑1 (MQ=60)
CCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGT < SRR4302535.1627363/94‑1 (MQ=60)
CCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGT < SRR4302535.4653652/94‑1 (MQ=60)
CATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTT > SRR4302535.2431805/1‑94 (MQ=60)
CATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTT > SRR4302535.806091/1‑94 (MQ=60)
TCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGC > SRR4302535.649130/1‑94 (MQ=60)
CAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAG > SRR4302535.767665/1‑94 (MQ=60)
AGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGG > SRR4302535.3989659/1‑94 (MQ=60)
AGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGG < SRR4302535.2546975/94‑1 (MQ=60)
AGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGG > SRR4302535.447288/1‑94 (MQ=60)
AGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGG > SRR4302535.1403075/1‑94 (MQ=60)
AGCGCGTTAACCAGACGTTCCGGCGCGAACATGCCGTTCTTCACCGGATAATT‑TTT‑TTTGCAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGG < SRR4302535.2808621/94‑1 (MQ=60)
GCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGG < SRR4302535.2843974/94‑1 (MQ=60)
CGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGT < SRR4302535.1856929/94‑1 (MQ=60)
CGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGG > SRR4302535.282414/1‑94 (MQ=60)
GCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTG > SRR4302535.377169/1‑94 (MQ=60)
GCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTG < SRR4302535.1840125/94‑1 (MQ=60)
GCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTG > SRR4302535.4014681/1‑94 (MQ=60)
GCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTG > SRR4302535.705766/1‑94 (MQ=60)
TAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCT > SRR4302535.3134386/1‑94 (MQ=60)
TAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCT < SRR4302535.987839/94‑1 (MQ=60)
TAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCT < SRR4302535.1590241/94‑1 (MQ=60)
ACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCATCT > SRR4302535.1548724/1‑94 (MQ=60)
CCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTT > SRR4302535.2416482/1‑94 (MQ=60)
CCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTT < SRR4302535.82402/94‑1 (MQ=60)
CCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTT > SRR4302535.4134403/1‑94 (MQ=60)
CCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTT > SRR4302535.2993553/1‑94 (MQ=60)
CCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTT < SRR4302535.1581695/94‑1 (MQ=60)
CAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTG > SRR4302535.3596599/1‑94 (MQ=60)
CAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTG < SRR4302535.2901286/94‑1 (MQ=60)
AGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCG > SRR4302535.3274376/1‑94 (MQ=60)
AGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCG > SRR4302535.2811392/1‑94 (MQ=60)
ACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGT < SRR4302535.4280426/94‑1 (MQ=60)
CGTTCCGTCGCGAACATGCCTTTCTTCACCGGATAATG‑TTTCTCT‑CATTTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTA > SRR4302535.4711622/1‑94 (MQ=60)
CGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTA > SRR4302535.1025389/1‑94 (MQ=60)
CGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTA > SRR4302535.3759979/1‑94 (MQ=60)
GTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGAGGCCTCTTGCGTAC > SRR4302535.3226894/1‑94 (MQ=60)
TTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACT < SRR4302535.3024916/94‑1 (MQ=60)
TTCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACT > SRR4302535.4647152/1‑94 (MQ=60)
TCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTC < SRR4302535.303048/94‑1 (MQ=60)
TCCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTC < SRR4302535.3946758/94‑1 (MQ=60)
CCGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCA < SRR4302535.1979455/94‑1 (MQ=60)
CGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCAT < SRR4302535.4098227/94‑1 (MQ=60)
CGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCAT < SRR4302535.3964502/94‑1 (MQ=60)
CGGCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCAT > SRR4302535.725909/1‑94 (MQ=60)
GCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAG < SRR4302535.887142/94‑1 (MQ=60)
GCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAG < SRR4302535.9761/94‑1 (MQ=60)
GCGCGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAG < SRR4302535.2716060/94‑1 (MQ=60)
CGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGT > SRR4302535.883531/1‑94 (MQ=60)
CGAACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGT > SRR4302535.1576893/1‑94 (MQ=60)
AACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCG > SRR4302535.881269/1‑94 (MQ=60)
ACATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGG > SRR4302535.965977/1‑94 (MQ=60)
CATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGC > SRR4302535.611896/1‑94 (MQ=60)
CATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGC > SRR4302535.3148872/1‑94 (MQ=60)
CATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGC > SRR4302535.4688593/1‑94 (MQ=60)
ATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCC < SRR4302535.109619/94‑1 (MQ=60)
ATGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCC > SRR4302535.984564/1‑94 (MQ=60)
TGCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCT > SRR4302535.4695959/1‑94 (MQ=60)
GCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTC > SRR4302535.1997674/1‑94 (MQ=60)
GCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTC < SRR4302535.1265007/94‑1 (MQ=60)
GCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTC > SRR4302535.3945170/1‑94 (MQ=60)
GCCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTC > SRR4302535.3500085/1‑94 (MQ=60)
CCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCCGGGTGGCCTCTTGCGTACTCATAGTGTCGGGCTCC > SRR4302535.75793/1‑94 (MQ=60)
CCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCC > SRR4302535.2589283/1‑94 (MQ=60)
CCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCC > SRR4302535.4299673/1‑94 (MQ=60)
CCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCC > SRR4302535.1977187/1‑94 (MQ=60)
CCTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCC > SRR4302535.1491327/1‑94 (MQ=60)
CTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCC > SRR4302535.135106/1‑94 (MQ=60)
CTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCC > SRR4302535.4697644/1‑94 (MQ=60)
CTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCC > SRR4302535.1746314/1‑94 (MQ=60)
CTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCC > SRR4302535.4025988/1‑94 (MQ=60)
CTTTCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCC > SRR4302535.922359/1‑94 (MQ=60)
TCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGC > SRR4302535.2753819/1‑94 (MQ=60)
TCTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGC > SRR4302535.1688587/1‑94 (MQ=60)
CTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCA > SRR4302535.2564083/1‑94 (MQ=60)
CTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCA > SRR4302535.489806/1‑94 (MQ=60)
CTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCA > SRR4302535.1962390/1‑94 (MQ=60)
CTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCA < SRR4302535.3832077/94‑1 (MQ=60)
CTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCA > SRR4302535.3155005/1‑94 (MQ=60)
CTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCA > SRR4302535.3698712/1‑94 (MQ=60)
CTTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCA > SRR4302535.1427947/1‑94 (MQ=60)
TTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCAT < SRR4302535.4394153/94‑1 (MQ=60)
TTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCAT > SRR4302535.2698562/1‑94 (MQ=60)
TTCACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCAT < SRR4302535.2973737/94‑1 (MQ=60)
CCCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCAT < SRR4302535.3455457/94‑1 (MQ=60)
ACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCAT < SRR4302535.2562982/94‑1 (MQ=60)
ACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCAT > SRR4302535.713174/1‑94 (MQ=60)
ACCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCAT > SRR4302535.1733235/1‑94 (MQ=60)
CCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATC > SRR4302535.1894112/1‑94 (MQ=60)
CCGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATC > SRR4302535.1684193/1‑94 (MQ=60)
CGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCA > SRR4302535.3169543/1‑94 (MQ=60)
CGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCA < SRR4302535.265068/94‑1 (MQ=60)
CGGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCA > SRR4302535.1131302/1‑94 (MQ=60)
GGATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCCA > SRR4302535.4293711/1‑94 (MQ=60)
GATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAG < SRR4302535.1533484/94‑1 (MQ=60)
GATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAG < SRR4302535.3959548/94‑1 (MQ=60)
ATAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGT > SRR4302535.2912931/1‑94 (MQ=60)
TAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTG > SRR4302535.2217651/1‑94 (MQ=60)
TAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTG < SRR4302535.20182/94‑1 (MQ=60)
TAATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTG > SRR4302535.1430249/1‑94 (MQ=60)
AATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGG < SRR4302535.2055564/94‑1 (MQ=60)
ATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGG > SRR4302535.3129381/1‑94 (MQ=60)
ATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGG < SRR4302535.4485569/94‑1 (MQ=60)
ATGTTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGG < SRR4302535.3999684/94‑1 (MQ=60)
tgtTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGT > SRR4302535.3024692/4‑94 (MQ=60)
tgtTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTATTGCGTCCTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGT > SRR4302535.2606616/4‑94 (MQ=60)
gtTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTA > SRR4302535.2651869/3‑94 (MQ=60)
gtTTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTA > SRR4302535.4613008/3‑94 (MQ=60)
TTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAAT < SRR4302535.1191218/94‑1 (MQ=60)
TTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAAT < SRR4302535.3108947/94‑1 (MQ=60)
T‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGG < SRR4302535.2640889/94‑1 (MQ=60)
TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGC > SRR4302535.1041535/1‑94 (MQ=60)
TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGC < SRR4302535.1655027/94‑1 (MQ=60)
TT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCA > SRR4302535.1944737/1‑94 (MQ=60)
TT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGGGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCA > SRR4302535.3095369/1‑94 (MQ=60)
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TTTTGCCACGTTCAAGGTTAAACGAAACGCCATCCAGCGCTTTAACCAGACGTTCCGGCGCGAACATGCCTTTCTTCACCGGATAATG‑TTT‑TTT‑CAGGTCGATAGCCTGCAACAGCGGTTGTTGCAGGGTGGCCTCTTGCGTACTCATAGTGTCGGCCTCCCGGCATCATCAAGTGGGTAATGGCA > NC_000913/3700350‑3700535
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |