Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,745,316 |
C→T |
I201I (ATC→ATT) |
lyxK → |
L‑xylulose kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,745,316 | 0 | C | T | 99.6%
| 810.0
/ ‑5.6
| 230 | I201I (ATC→ATT) | lyxK | L‑xylulose kinase |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (135/93); total (135/95) |
| Fisher's exact test for biased strand distribution p-value = 4.10e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.29e-01 |
Only 100 of 241 total aligned reads displayed.
AGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCT > NC_000913/3745226‑3745405
|
aGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGc < 2:3182016/93‑1 (MQ=255)
ggCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCt > 1:3111/1‑93 (MQ=255)
ggCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCt < 1:2780950/93‑1 (MQ=255)
ggCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCt > 2:2756030/1‑93 (MQ=255)
cTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGa > 2:695791/1‑93 (MQ=255)
gtgAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGaaa < 2:1229528/93‑1 (MQ=255)
gAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAaatc > 1:4457130/1‑93 (MQ=255)
gAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAaatc > 1:1814540/1‑93 (MQ=255)
gAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAaatc > 2:648780/1‑93 (MQ=255)
gAAGAGAGCAATATTTCAGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATAGCTGAaatc < 1:3545978/93‑1 (MQ=255)
aaGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAaatca < 2:4637002/93‑1 (MQ=255)
agagagCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAaatcca > 1:1768447/1‑91 (MQ=255)
gagagCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGGaatcaat > 2:3397254/1‑93 (MQ=255)
gagagCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAaatcaat < 2:2965039/93‑1 (MQ=255)
agCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCAc < 1:3216628/93‑1 (MQ=255)
gCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACg < 1:893549/93‑1 (MQ=255)
gCAATATTTCCGAGTCCAACCTCTACAACATGAGCCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACg > 1:4078840/1‑93 (MQ=255)
cAATATTTCCGAGTCCACCCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGc < 2:1628886/93‑1 (MQ=255)
cAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGc < 1:1712561/93‑1 (MQ=255)
cAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGc < 2:2336459/93‑1 (MQ=255)
atatTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGccc < 2:13293/93‑1 (MQ=255)
atatTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGccc > 2:4067509/1‑93 (MQ=255)
atatTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGccc < 2:982181/93‑1 (MQ=255)
tatTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCt > 1:597836/1‑93 (MQ=255)
tatTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCt < 2:538082/93‑1 (MQ=255)
tttCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTgc < 2:3658862/93‑1 (MQ=255)
tttCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTgc > 2:3755744/1‑93 (MQ=255)
ccGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTgccgc > 2:1138487/1‑93 (MQ=255)
cGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTgccgcc > 2:3613124/1‑93 (MQ=255)
gTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTcccccccct > 1:603731/1‑90 (MQ=255)
gTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCtgt < 2:2501842/93‑1 (MQ=255)
gTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCtgt < 1:30014/93‑1 (MQ=255)
gTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCcgt > 2:3996669/1‑93 (MQ=255)
cAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCtgttgt > 1:1741373/1‑93 (MQ=255)
cAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCtgttgt < 2:2228359/93‑1 (MQ=255)
aCCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCg > 2:1762520/1‑93 (MQ=255)
aCCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCg < 1:1989879/93‑1 (MQ=255)
ccTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCgg > 2:2694034/1‑93 (MQ=255)
tctACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGAt > 1:1153414/1‑93 (MQ=255)
tctACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGAt > 1:3151316/1‑93 (MQ=255)
tACAACATGAGTCTTGGGGGATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATcg > 1:1854781/1‑92 (MQ=255)
tACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCt > 2:3779450/1‑93 (MQ=255)
tACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCt > 1:3451077/1‑93 (MQ=255)
acaacaTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTg > 1:4045130/1‑93 (MQ=255)
caacaTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGc < 2:2639888/93‑1 (MQ=255)
acaTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCg > 2:1897796/1‑93 (MQ=255)
acaTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCg > 2:140604/1‑93 (MQ=255)
caTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGa > 1:4330624/1‑93 (MQ=255)
aTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGaa > 2:329104/1‑93 (MQ=255)
aTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGaa > 1:3353915/1‑93 (MQ=255)
aTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGaa < 1:3816606/93‑1 (MQ=255)
tGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGaaa > 1:4167614/1‑93 (MQ=255)
gAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAAt < 2:3347617/93‑1 (MQ=255)
aGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATc < 2:3560481/93‑1 (MQ=255)
gTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCt > 1:4677711/1‑93 (MQ=255)
ttGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCg > 2:2562740/1‑93 (MQ=255)
ttGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCg < 1:2396563/93‑1 (MQ=255)
ttGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAAACACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCg > 1:2136754/1‑93 (MQ=255)
tGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCgg < 1:692302/93‑1 (MQ=255)
ggtgAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAACCAATCCCGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCggg < 2:2076489/90‑1 (MQ=255)
ggggAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCggg > 1:2672260/1‑93 (MQ=255)
ggggAAGATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCggg < 2:38164/93‑1 (MQ=255)
gggAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCgggg < 1:3760868/93‑1 (MQ=255)
gggAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCgggg > 1:3955449/1‑93 (MQ=255)
ggAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGga > 1:1020606/1‑93 (MQ=255)
ggAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGga < 1:2280311/93‑1 (MQ=255)
gAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGgag < 1:4490338/93‑1 (MQ=255)
aaTATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGgaga < 2:1653943/93‑1 (MQ=255)
aaTATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGgaga < 1:966411/93‑1 (MQ=255)
aaTATGACCCGTGCCTCACCGACTGGCTCGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGgaga < 2:2575497/93‑1 (MQ=255)
atatGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGAt > 2:2428390/1‑93 (MQ=255)
tatGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATc > 2:4565571/1‑93 (MQ=255)
aCCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCg > 1:1340532/1‑93 (MQ=255)
cccGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGc < 1:4140596/93‑1 (MQ=255)
ccGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCt > 2:1174803/1‑93 (MQ=255)
cGTGCCTCTCCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTCTTGTCGGATCTGCCTAAATCTGCGGGGAGATCACCGCTc < 2:1559387/93‑1 (MQ=255)
cGTGCCTCACCGACTGGCTGGTGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTc < 1:702736/93‑1 (MQ=255)
gTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCa > 2:2615521/1‑93 (MQ=255)
gTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCa > 2:2878824/1‑93 (MQ=255)
gCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGa > 1:4636679/1‑93 (MQ=255)
gCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGa < 1:1569869/93‑1 (MQ=255)
cTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACa < 1:2481176/93‑1 (MQ=255)
tCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGATAg > 2:434376/1‑93 (MQ=255)
cgccGACTGTCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAgc < 1:2525081/91‑1 (MQ=255)
cACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAgc < 2:2383088/93‑1 (MQ=255)
cACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAgc > 2:3932442/1‑93 (MQ=255)
cACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAgc < 1:2801300/93‑1 (MQ=255)
tggctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCCGACAGCCGCCCTg > 2:199748/1‑93 (MQ=255)
tggctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTg < 2:3886286/93‑1 (MQ=255)
ggctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGa > 2:4151500/1‑93 (MQ=255)
ggctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGa > 1:1258816/1‑93 (MQ=255)
gatggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGAc < 1:959700/91‑1 (MQ=255)
ggggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCgg < 1:1629017/93‑1 (MQ=255)
ggggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCgg < 1:3502565/93‑1 (MQ=255)
ggggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCgg > 2:2800259/1‑93 (MQ=255)
ggggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCgg > 2:772483/1‑93 (MQ=255)
ggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTc < 2:2269476/93‑1 (MQ=255)
ggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTc > 1:1662927/1‑93 (MQ=255)
gATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCt > 1:1441235/1‑93 (MQ=255)
gATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCt > 2:2912727/1‑93 (MQ=255)
|
AGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCT > NC_000913/3745226‑3745405
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGAAA > NC_000913/3745223‑3745409
|
CAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATT < SRR4302535.1704498/94‑1 (MQ=60)
CAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATT < SRR4302535.3830280/94‑1 (MQ=60)
CAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATT > SRR4302535.3812211/1‑94 (MQ=60)
AAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTG > SRR4302535.3387667/1‑94 (MQ=60)
AAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTG < SRR4302535.2269042/94‑1 (MQ=60)
AAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTG < SRR4302535.3869747/94‑1 (MQ=60)
AAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTG > SRR4302535.2556349/1‑94 (MQ=60)
AGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCT > SRR4302535.3140/1‑94 (MQ=60)
GGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTG < SRR4302535.2800748/94‑1 (MQ=60)
GTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAAT < SRR4302535.4603712/94‑1 (MQ=60)
TGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATC > SRR4302535.1827660/1‑94 (MQ=60)
TGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATC > SRR4302535.4487697/1‑94 (MQ=60)
GAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCA > SRR4302535.1660560/1‑94 (MQ=60)
GAAGAGAGCAATATTTCAGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATAGCTGAAATCA < SRR4302535.3570600/94‑1 (MQ=60)
AAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCCA > SRR4302535.1781268/1‑94 (MQ=60)
AGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAAT < SRR4302535.319333/94‑1 (MQ=60)
GAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAGTCAATC < SRR4302535.2073282/94‑1 (MQ=60)
AGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATGAATTA > SRR4302535.4093861/1‑94 (MQ=60)
AGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCA > SRR4302535.1204161/1‑94 (MQ=60)
AGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCA > SRR4302535.2471021/1‑94 (MQ=60)
GAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCAC < SRR4302535.69943/94‑1 (MQ=60)
AGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACG < SRR4302535.3238910/94‑1 (MQ=60)
AGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACG > SRR4302535.1711692/1‑94 (MQ=60)
AGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACG > SRR4302535.643376/1‑94 (MQ=60)
AGCAATATTTCCGAGTCCAACCTCTACAACATGAGCCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACG > SRR4302535.4106746/1‑94 (MQ=60)
GCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGC < SRR4302535.899880/94‑1 (MQ=60)
CAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCC < SRR4302535.1724941/94‑1 (MQ=60)
CAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCC > SRR4302535.2212755/1‑94 (MQ=60)
AATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCC < SRR4302535.3420166/94‑1 (MQ=60)
AATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCC > SRR4302535.355650/1‑94 (MQ=60)
AATATTTCCGAATCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGGTTGCTGAAATCAATCACGCCC > SRR4302535.1762048/1‑94 (MQ=60)
ATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCT > SRR4302535.3311430/1‑94 (MQ=60)
ATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCT > SRR4302535.3667759/1‑94 (MQ=60)
ATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCT > SRR4302535.602019/1‑94 (MQ=60)
TATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTG < SRR4302535.1862724/94‑1 (MQ=60)
ATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGACTGGGGATTGCTGAAATCAATCACGCCCTGC > SRR4302535.3523179/1‑94 (MQ=60)
ATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGACTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGC > SRR4302535.2806890/1‑94 (MQ=60)
TTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCG > SRR4302535.1949811/1‑94 (MQ=60)
TTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCC > SRR4302535.3946096/1‑94 (MQ=60)
CGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCT < SRR4302535.1501643/94‑1 (MQ=60)
AGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTcccccccct > SRR4302535.607955/1‑85 (MQ=60)
GTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTT < SRR4302535.30246/94‑1 (MQ=60)
CCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGT > SRR4302535.1753960/1‑94 (MQ=60)
CAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTC > SRR4302535.2750193/1‑94 (MQ=60)
CAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTC > SRR4302535.4140528/1‑94 (MQ=60)
AACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCG < SRR4302535.3185710/94‑1 (MQ=60)
AACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCG < SRR4302535.414478/94‑1 (MQ=60)
AACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCG > SRR4302535.3017564/1‑94 (MQ=60)
AACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTCCTGAAATCAATCACCCCCTGCCGCCTGTTGTCG > SRR4302535.4309315/1‑94 (MQ=60)
ACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGG < SRR4302535.2004204/94‑1 (MQ=60)
ACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGG < SRR4302535.1274604/94‑1 (MQ=60)
CTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGAT > SRR4302535.1161661/1‑94 (MQ=60)
CTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGAT > SRR4302535.3173216/1‑94 (MQ=60)
CTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGAT > SRR4302535.228523/1‑94 (MQ=60)
TCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATC < SRR4302535.4051294/94‑1 (MQ=60)
TCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATC > SRR4302535.3138247/1‑94 (MQ=60)
CTACAACATGAGTCTTGGGGGATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCG > SRR4302535.1868141/1‑94 (MQ=60)
CTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCT > SRR4302535.3475062/1‑94 (MQ=60)
TACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTG > SRR4302535.4072824/1‑94 (MQ=60)
TACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTG > SRR4302535.938475/1‑94 (MQ=60)
TACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTG < SRR4302535.666810/94‑1 (MQ=60)
TACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTG < SRR4302535.4230462/94‑1 (MQ=60)
TACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTG > SRR4302535.495248/1‑94 (MQ=60)
CAACATGAGTCTTGGGGAATATGACCCGTGCCTCGCCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCC < SRR4302535.969707/94‑1 (MQ=60)
AACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCG > SRR4302535.2669829/1‑94 (MQ=60)
ACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGA > SRR4302535.4360240/1‑94 (MQ=60)
CATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCCCGCCCTGCCGTCTGTTGTCGGATCTGCCGAA > SRR4302535.4509124/1‑94 (MQ=60)
CATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAA > SRR4302535.3377270/1‑94 (MQ=60)
ATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAA > SRR4302535.4196150/1‑94 (MQ=60)
ATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAA < SRR4302535.3842941/94‑1 (MQ=60)
ATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGACCTGCCGCCTGTTGTCGGGTCTGCCGAAA > SRR4302535.1744761/1‑94 (MQ=60)
GGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCT > SRR4302535.1117645/1‑94 (MQ=60)
AGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCT < SRR4302535.1316944/94‑1 (MQ=60)
AGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCT > SRR4302535.73927/1‑94 (MQ=60)
AGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCT > SRR4302535.4709277/1‑94 (MQ=60)
GTCTTGGGGAATATGACCCGTGCCTCACCGTCTGGCTGGGGTTTGCTGAGATCAATCACGTCCTGCCGCCTGTTGTCGGCGCTGCCGAAAGCTG > SRR4302535.3371694/1‑94 (MQ=60)
TCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGC > SRR4302535.1924340/1‑94 (MQ=60)
CTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGGAATCTGCG > SRR4302535.1826749/1‑94 (MQ=60)
CTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAAACACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCG > SRR4302535.2152147/1‑94 (MQ=60)
TTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGG < SRR4302535.2413788/94‑1 (MQ=60)
TGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGG < SRR4302535.697153/94‑1 (MQ=60)
TGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGG > SRR4302535.2691379/1‑94 (MQ=60)
GGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGG > SRR4302535.3982456/1‑94 (MQ=60)
GGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGA > SRR4302535.3398046/1‑94 (MQ=60)
GGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGA > SRR4302535.1027858/1‑94 (MQ=60)
GGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGA < SRR4302535.3786858/94‑1 (MQ=60)
GGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGA < SRR4302535.605690/94‑1 (MQ=60)
GGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAG < SRR4302535.2296600/94‑1 (MQ=60)
GAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGA > SRR4302535.4697766/1‑94 (MQ=60)
GAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGA < SRR4302535.4521162/94‑1 (MQ=60)
AATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATGAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGAT > SRR4302535.2534910/1‑94 (MQ=60)
AATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGAT < SRR4302535.973279/94‑1 (MQ=60)
ATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGGTC > SRR4302535.3084797/1‑94 (MQ=60)
ATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATC < SRR4302535.1375257/94‑1 (MQ=60)
ATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATC > SRR4302535.3693921/1‑94 (MQ=60)
ATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATC > SRR4302535.4444491/1‑94 (MQ=60)
ATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCAC > SRR4302535.948074/1‑94 (MQ=60)
GACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCG < SRR4302535.2391457/94‑1 (MQ=60)
GACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCG > SRR4302535.1350095/1‑94 (MQ=60)
ACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGCTCACCGC > SRR4302535.3795050/1‑94 (MQ=60)
CCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCT > SRR4302535.4179754/1‑94 (MQ=60)
CCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCT < SRR4302535.4168947/94‑1 (MQ=60)
CGTGCCTCACCGACTGGCTGGTGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCA < SRR4302535.707664/94‑1 (MQ=60)
GTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAG > SRR4302535.1679746/1‑94 (MQ=60)
TGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGA > SRR4302535.4668128/1‑94 (MQ=60)
GCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGAC < SRR4302535.1581201/94‑1 (MQ=60)
CTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAG > SRR4302535.2507927/1‑94 (MQ=60)
CTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAG < SRR4302535.2499066/94‑1 (MQ=60)
CTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAG > SRR4302535.1631410/1‑94 (MQ=60)
CGCCGACTGTCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCC < SRR4302535.2543277/94‑1 (MQ=60)
CACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCC < SRR4302535.2821224/94‑1 (MQ=60)
ACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCG > SRR4302535.1779133/1‑94 (MQ=60)
CGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCC > SRR4302535.2707595/1‑94 (MQ=60)
CTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTG < SRR4302535.4564051/94‑1 (MQ=60)
TGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGA > SRR4302535.1267823/1‑94 (MQ=60)
GGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGAC < SRR4302535.3850537/94‑1 (MQ=60)
GATGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACC < SRR4302535.966515/94‑1 (MQ=60)
TGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGG > SRR4302535.538207/1‑94 (MQ=60)
GGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGT < SRR4302535.1640780/94‑1 (MQ=60)
GGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGT < SRR4302535.3526911/94‑1 (MQ=60)
GGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTC < SRR4302535.2870495/94‑1 (MQ=60)
GGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTC > SRR4302535.1674942/1‑94 (MQ=60)
GGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCT > SRR4302535.1527535/1‑94 (MQ=60)
GGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCT > SRR4302535.1451544/1‑94 (MQ=60)
ATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGA > SRR4302535.3400870/1‑94 (MQ=60)
TTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGAA < SRR4302535.2285275/94‑1 (MQ=60)
TGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGAAA > SRR4302535.4597125/1‑94 (MQ=60)
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CAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGAAA > NC_000913/3745223‑3745409
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
