Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,817,156 |
T→C |
S550G (AGT→GGT) |
yicF ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,817,156 | 0 | T | C | 100.0%
| 718.7
/ NA
| 227 | S550G (AGT→GGT) | yicF | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (120/107); total (120/107) |
Only 100 of 232 total aligned reads displayed.
TACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAC > NC_000913/3817066‑3817244
|
cGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGccc < 2:1807739/93‑1 (MQ=255)
gCCTTAAGCTGTGATTACCTGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCa < 2:3261882/93‑1 (MQ=255)
gCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCa < 2:3646835/93‑1 (MQ=255)
cTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGc < 1:853009/93‑1 (MQ=255)
cTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGc < 2:1384192/93‑1 (MQ=255)
ttAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGct < 1:3825778/93‑1 (MQ=255)
ttAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGct > 2:2257837/1‑93 (MQ=255)
ttAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTAGGCAGCCAGCCAACCGCGCAGct > 1:3130916/1‑93 (MQ=255)
tAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGctt > 1:1858217/1‑93 (MQ=255)
aaGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttc < 1:1274327/93‑1 (MQ=255)
aaGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttc < 1:3557131/93‑1 (MQ=255)
aaGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttc < 2:2403013/93‑1 (MQ=255)
aGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttct < 2:3769797/93‑1 (MQ=255)
aGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttct > 2:3746900/1‑93 (MQ=255)
gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttctt < 1:2117144/93‑1 (MQ=255)
gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttctt > 2:1171559/1‑93 (MQ=255)
cTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTg > 2:557689/1‑93 (MQ=255)
gATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAttt < 2:1332307/93‑1 (MQ=255)
aTTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTg > 1:2208154/1‑93 (MQ=255)
aTTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTg > 1:1776649/1‑93 (MQ=255)
ttACCGGTATTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTgc > 2:4581988/1‑93 (MQ=255)
cGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAt < 2:3034842/93‑1 (MQ=255)
ggTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAtt < 2:1765794/93‑1 (MQ=255)
ggTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAtt > 2:1681567/1‑93 (MQ=255)
ggTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAtt < 2:355692/93‑1 (MQ=255)
cTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttc < 2:2498715/93‑1 (MQ=255)
cTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttc < 2:3474616/93‑1 (MQ=255)
ttttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttcc > 1:1511900/1‑93 (MQ=255)
ttttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttcc < 2:489194/93‑1 (MQ=255)
tttACTACAGCCAGGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttcct < 1:1768220/93‑1 (MQ=255)
tttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttcct < 2:948981/93‑1 (MQ=255)
tttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttcct < 2:3191321/93‑1 (MQ=255)
tttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttcct < 1:2827242/93‑1 (MQ=255)
tactacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttccttc < 2:3521865/93‑1 (MQ=255)
ctacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCa > 1:2197732/1‑93 (MQ=255)
tacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAt < 1:1007694/93‑1 (MQ=255)
cAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTc > 1:3759972/1‑93 (MQ=255)
gCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCaa > 2:4265239/1‑93 (MQ=255)
ccACGAAGGCCACTAAGGTTCAAACCCTGTGATCTGCTGGGCAGCCGCCCATCCGCCCACCTTCTTGTTTTGCGCATTTTCCTTCCATTCAAt < 2:4195411/93‑1 (MQ=255)
ccACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAt > 1:2664113/1‑93 (MQ=255)
cACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATa < 1:1176867/93‑1 (MQ=255)
cACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATa < 2:222353/93‑1 (MQ=255)
cACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATa > 2:836700/1‑93 (MQ=255)
aCGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATaa > 1:1103699/1‑93 (MQ=255)
aCGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATaa < 1:4210229/93‑1 (MQ=255)
cGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAc > 2:3061403/1‑93 (MQ=255)
gAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc < 1:529771/93‑1 (MQ=255)
gAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc < 2:19776/93‑1 (MQ=255)
gAAGGACACTAAGGTGCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc < 2:1469740/93‑1 (MQ=255)
aaGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCt > 1:42786/1‑93 (MQ=255)
aaGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCt < 2:2662266/93‑1 (MQ=255)
aaGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCt < 2:2091946/93‑1 (MQ=255)
aGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTg > 2:3553782/1‑93 (MQ=255)
ggACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGt > 2:2546628/1‑93 (MQ=255)
ggACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGt > 2:1883582/1‑93 (MQ=255)
gACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTTTc > 1:1728239/1‑93 (MQ=255)
gACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTc < 2:1290259/93‑1 (MQ=255)
acacTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCt < 1:3880591/93‑1 (MQ=255)
cacTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTg > 1:979503/1‑93 (MQ=255)
ccTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTgg < 1:3510369/92‑1 (MQ=255)
acTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTgg > 2:899593/1‑93 (MQ=255)
acTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTgg > 1:2991852/1‑93 (MQ=255)
acTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTgg < 2:2009712/93‑1 (MQ=255)
acTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTgg > 2:661401/1‑93 (MQ=255)
acTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATGTTCCTTCCATTCAATAACCTGTCTgg > 2:3793503/1‑93 (MQ=255)
tAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgcg > 2:4037345/1‑93 (MQ=255)
aGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGcgcg > 1:3323793/1‑93 (MQ=255)
ggTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGt > 1:199311/1‑93 (MQ=255)
tCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTcac > 2:439634/1‑91 (MQ=255)
aaaaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGa > 1:2496170/1‑93 (MQ=255)
aaaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGTGCGTCCCGAt > 2:4225915/1‑93 (MQ=255)
aaaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGAt > 2:4646329/1‑93 (MQ=255)
aaaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGAt > 2:1545126/1‑93 (MQ=255)
aCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATGCAATAACCTGTCTGGCGCGTCCCGATcc > 1:4509795/1‑93 (MQ=255)
cTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg > 2:3390804/1‑93 (MQ=255)
cTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg > 2:3338893/1‑93 (MQ=255)
cTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg > 1:1316246/1‑93 (MQ=255)
cTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg > 2:2760329/1‑93 (MQ=255)
tgtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGt < 2:547560/93‑1 (MQ=255)
tgtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGt > 2:4103912/1‑93 (MQ=255)
tgtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGt > 1:2915096/1‑93 (MQ=255)
tgtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGt < 2:425066/93‑1 (MQ=255)
gtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTc > 1:1579023/1‑93 (MQ=255)
tgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcc < 1:1091510/93‑1 (MQ=255)
gATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTccc < 1:2543452/93‑1 (MQ=255)
gATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTccc > 1:607686/1‑93 (MQ=255)
gATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTccc > 2:910061/1‑93 (MQ=255)
aTCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcccc > 2:2912539/1‑93 (MQ=255)
tCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCg > 1:925066/1‑93 (MQ=255)
tgGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgc > 1:4623032/1‑93 (MQ=255)
tgGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgc > 2:3420264/1‑93 (MQ=255)
gCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgctgc < 1:1656238/93‑1 (MQ=255)
agccagccAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGctgctg > 1:1439150/1‑93 (MQ=255)
agccagccAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGctgctg > 2:806770/1‑93 (MQ=255)
gccagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc > 2:3449842/1‑93 (MQ=255)
gccagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc > 1:1965004/1‑93 (MQ=255)
cagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCa > 1:482025/1‑93 (MQ=255)
agccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAg > 1:4045948/1‑93 (MQ=255)
caACCGCCCCGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGACCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAc < 2:2834860/93‑1 (MQ=255)
caACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAc > 1:4407186/1‑93 (MQ=255)
|
TACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAC > NC_000913/3817066‑3817244
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTG > NC_000913/3817065‑3817246
|
CTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGC > SRR4302535.823085/1‑94 (MQ=60)
TACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCC > SRR4302535.1452104/1‑94 (MQ=60)
CGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCA > SRR4302535.2094156/1‑94 (MQ=60)
CGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCA > SRR4302535.4398434/1‑94 (MQ=60)
CGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCA > SRR4302535.3707751/1‑94 (MQ=60)
CTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCT < SRR4302535.40645/94‑1 (MQ=60)
CTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCT < SRR4302535.859015/94‑1 (MQ=60)
CTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTAGGCAGCCAGCCAACCGCGCAGCT > SRR4302535.3152723/1‑94 (MQ=60)
TTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTT > SRR4302535.1871617/1‑94 (MQ=60)
TTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTT < SRR4302535.3852171/94‑1 (MQ=60)
AAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCT < SRR4302535.1283423/94‑1 (MQ=60)
AAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCT < SRR4302535.3581804/94‑1 (MQ=60)
AAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCT > SRR4302535.2003004/1‑94 (MQ=60)
GCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTG < SRR4302535.2132416/94‑1 (MQ=60)
GCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTG > SRR4302535.2783917/1‑94 (MQ=60)
CTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGA > SRR4302535.2017050/1‑94 (MQ=60)
GATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTG > SRR4302535.2677400/1‑94 (MQ=60)
GATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTG > SRR4302535.2223882/1‑94 (MQ=60)
GATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTG > SRR4302535.1789513/1‑94 (MQ=60)
TTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCG > SRR4302535.1677212/1‑94 (MQ=60)
TACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGC < SRR4302535.3839766/94‑1 (MQ=60)
CGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATT > SRR4302535.1102767/1‑94 (MQ=60)
CGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATT > SRR4302535.1690196/1‑94 (MQ=60)
GGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTT > SRR4302535.4286770/1‑94 (MQ=60)
GTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTT > SRR4302535.3103574/1‑94 (MQ=60)
CTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCC > SRR4302535.1522790/1‑94 (MQ=60)
CTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCC > SRR4302535.3216357/1‑94 (MQ=60)
TTTACTACAGCCAGGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTT < SRR4302535.1781039/94‑1 (MQ=60)
TTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTT < SRR4302535.2847307/94‑1 (MQ=60)
TTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTT > SRR4302535.2885692/1‑94 (MQ=60)
TACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCC < SRR4302535.1830929/94‑1 (MQ=60)
ACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCA > SRR4302535.2213393/1‑94 (MQ=60)
CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAT > SRR4302535.1831341/1‑94 (MQ=60)
CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAT < SRR4302535.1650611/94‑1 (MQ=60)
CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAAACGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAT > SRR4302535.226034/1‑94 (MQ=60)
TACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATT < SRR4302535.1014854/94‑1 (MQ=60)
ACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTC > SRR4302535.3785960/1‑94 (MQ=60)
CAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCA < SRR4302535.2949618/94‑1 (MQ=60)
GCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAT < SRR4302535.1511393/94‑1 (MQ=60)
GCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAT > SRR4302535.2683186/1‑94 (MQ=60)
CCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATA < SRR4302535.3897793/94‑1 (MQ=60)
CACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAA > SRR4302535.124720/1‑94 (MQ=60)
CACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAA > SRR4302535.1111582/1‑94 (MQ=60)
CACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAA < SRR4302535.1185266/94‑1 (MQ=60)
ACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAC < SRR4302535.4118864/94‑1 (MQ=60)
ACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAC < SRR4302535.4239048/94‑1 (MQ=60)
GAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCT < SRR4302535.533475/94‑1 (MQ=60)
GAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCT > SRR4302535.43110/1‑94 (MQ=60)
AAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTT > SRR4302535.1246140/1‑94 (MQ=60)
GGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTTTC > SRR4302535.1740730/1‑94 (MQ=60)
AGACACTAAGGTTCAAAGCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCATCTTCTTGATTTGCGCATTGTCCTTCCATTCAATAACCTGTC < SRR4302535.1568802/94‑1 (MQ=60)
GACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCT < SRR4302535.2196232/94‑1 (MQ=60)
ACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTG < SRR4302535.938697/94‑1 (MQ=60)
ACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTG < SRR4302535.340590/94‑1 (MQ=60)
ACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTG > SRR4302535.986464/1‑94 (MQ=60)
ACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTG < SRR4302535.3907226/94‑1 (MQ=60)
ACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTG > SRR4302535.1032691/1‑94 (MQ=60)
ACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTG < SRR4302535.2214064/94‑1 (MQ=60)
ACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTG < SRR4302535.1183187/94‑1 (MQ=60)
CACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGG > SRR4302535.3012830/1‑94 (MQ=60)
CCTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC < SRR4302535.3534761/94‑1 (MQ=60)
ACTAAGGTTCAAAACCTGTGATCTGCTGGTCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC < SRR4302535.832615/94‑1 (MQ=60)
ACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC > SRR4302535.3127010/1‑94 (MQ=60)
ACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC < SRR4302535.4662986/94‑1 (MQ=60)
CTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCG > SRR4302535.4525663/1‑94 (MQ=60)
CTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCG > SRR4302535.4561097/1‑94 (MQ=60)
CTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCG > SRR4302535.1774086/1‑94 (MQ=60)
AAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCG < SRR4302535.524350/94‑1 (MQ=60)
AAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCG > SRR4302535.3346916/1‑94 (MQ=60)
AGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGT > SRR4302535.200676/1‑94 (MQ=60)
AGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGT < SRR4302535.1318572/94‑1 (MQ=60)
GTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCC < SRR4302535.3908754/94‑1 (MQ=60)
GTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCC < SRR4302535.568596/94‑1 (MQ=60)
CAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGA > SRR4302535.2514177/1‑94 (MQ=60)
AACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATGCAATAACCTGTCTGGCGCGTCCCGATCC > SRR4302535.4540737/1‑94 (MQ=60)
ACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCA > SRR4302535.2534491/1‑94 (MQ=60)
CCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAG > SRR4302535.1325647/1‑94 (MQ=60)
CTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGT > SRR4302535.2935682/1‑94 (MQ=60)
TGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTC > SRR4302535.1386372/1‑94 (MQ=60)
TGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTC > SRR4302535.1590421/1‑94 (MQ=60)
GTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCC > SRR4302535.3676232/1‑94 (MQ=60)
TGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTTTCTGGGGCGTCCCGATCCAGTCCC > SRR4302535.3568758/1‑94 (MQ=60)
TGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCC > SRR4302535.611927/1‑94 (MQ=60)
TGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCC < SRR4302535.1099287/94‑1 (MQ=60)
TGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCC < SRR4302535.4309401/94‑1 (MQ=60)
GATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCC < SRR4302535.2561766/94‑1 (MQ=60)
ATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCG > SRR4302535.931616/1‑94 (MQ=60)
ATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCG < SRR4302535.1783081/94‑1 (MQ=60)
CTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGC > SRR4302535.4654432/1‑94 (MQ=60)
GCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCT < SRR4302535.920669/94‑1 (MQ=60)
GCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCT < SRR4302535.1668217/94‑1 (MQ=60)
CAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTG > SRR4302535.1449437/1‑94 (MQ=60)
AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGC > SRR4302535.1979169/1‑94 (MQ=60)
AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGC > SRR4302535.2230319/1‑94 (MQ=60)
AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATACAGTCTCCGGCAGCTGCTGC > SRR4302535.2841445/1‑94 (MQ=60)
CCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCA > SRR4302535.485408/1‑94 (MQ=60)
CCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCA > SRR4302535.1883887/1‑94 (MQ=60)
CAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAG > SRR4302535.4073644/1‑94 (MQ=60)
CAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAATCCCCGGCAGCTGCTGCCAG < SRR4302535.4668463/94‑1 (MQ=60)
CCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAC > SRR4302535.4437347/1‑94 (MQ=60)
AACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTG > SRR4302535.3495687/1‑94 (MQ=60)
AACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTG > SRR4302535.164166/1‑94 (MQ=60)
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CTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTG > NC_000913/3817065‑3817246
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
