Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,863,429 |
T→C |
M158V (ATG→GTG) |
yidE ← |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,863,429 | 0 | T | C | 100.0%
| 725.9
/ NA
| 228 | M158V (ATG→GTG) | yidE | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (130/98); total (130/98) |
Only 100 of 237 total aligned reads displayed.
TCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCATCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC > NC_000913/3863339‑3863518
|
cGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCa < 1:4162145/93‑1 (MQ=255)
cGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCa > 1:2069272/1‑93 (MQ=255)
aCATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATc > 1:4292657/1‑93 (MQ=255)
aCATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATc < 1:4630366/93‑1 (MQ=255)
aCATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAACCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATc < 1:1637048/93‑1 (MQ=255)
cATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCt < 1:3267937/93‑1 (MQ=255)
cATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCt > 2:2478740/1‑93 (MQ=255)
aTTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTg > 2:932722/1‑93 (MQ=255)
aTTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTg > 2:321939/1‑93 (MQ=255)
ttGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGa < 1:1013303/93‑1 (MQ=255)
gACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATc > 1:1923215/1‑93 (MQ=255)
gACGCGGAAAATAACCCGCAACATCCAAATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATc < 2:4564012/93‑1 (MQ=255)
aCGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCg > 1:3353430/1‑93 (MQ=255)
aCGCGGAAAATAAACCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCg > 2:403563/1‑93 (MQ=255)
ggAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCa > 2:4302660/1‑93 (MQ=255)
ggAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCa < 2:2913919/93‑1 (MQ=255)
gAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGAcact > 1:1202104/1‑90 (MQ=255)
aaaaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCAtt < 2:1447133/93‑1 (MQ=255)
aaaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCGTCTGATCGACCAttt > 1:2339556/1‑93 (MQ=255)
aaaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCAttt < 1:2623728/93‑1 (MQ=255)
aaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTc > 1:2144837/1‑93 (MQ=255)
aaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTc > 2:4094842/1‑93 (MQ=255)
aTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCGCCCCCATCTGATCGACCATTTcc < 2:4415905/93‑1 (MQ=255)
aTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTcc > 1:2845957/1‑93 (MQ=255)
aTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTcc > 1:1267985/1‑93 (MQ=255)
tAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCa < 1:1451622/93‑1 (MQ=255)
aCCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAtt > 1:849984/1‑93 (MQ=255)
aCCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAtt < 2:2305734/93‑1 (MQ=255)
aCCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAtt < 2:4554793/93‑1 (MQ=255)
aCCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAtt > 1:1841045/1‑93 (MQ=255)
cccGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTg < 2:3373479/93‑1 (MQ=255)
cccGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTg < 2:4283399/93‑1 (MQ=255)
ccGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTgg > 2:3269071/1‑93 (MQ=255)
cGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGgt > 2:2359734/1‑93 (MQ=255)
cGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGgt > 2:2257086/1‑93 (MQ=255)
cGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGgt < 1:272805/93‑1 (MQ=255)
aaCATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTa > 1:2037343/1‑93 (MQ=255)
aaCATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTa > 2:1160536/1‑93 (MQ=255)
aTCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAccc > 1:3990054/1‑93 (MQ=255)
tCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCa > 2:3251682/1‑93 (MQ=255)
ccACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAg < 2:128069/93‑1 (MQ=255)
cacaTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGGCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAACCAgg < 1:1104438/93‑1 (MQ=255)
cacaTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAgg > 1:2555220/1‑93 (MQ=255)
aTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcg > 1:3782205/1‑93 (MQ=255)
tGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcgc > 2:781360/1‑93 (MQ=255)
tGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCACGTccc > 2:3633507/1‑91 (MQ=255)
ggTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCGCCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcgcg > 1:647620/1‑93 (MQ=255)
ggTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcgcg < 2:2764321/93‑1 (MQ=255)
tGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCa < 1:3541264/93‑1 (MQ=255)
tGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCACTTCCATTGGTGTACCCAGGTCGCGCa > 2:3322767/1‑93 (MQ=255)
aaCAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCaaa > 2:2827553/1‑93 (MQ=255)
aCAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCaaaa < 1:2874482/93‑1 (MQ=255)
aCAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCaaaa < 2:3677081/93‑1 (MQ=255)
aaaaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATc > 1:795641/1‑93 (MQ=255)
aaaaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATc < 2:1572558/93‑1 (MQ=255)
aaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctg < 1:1319257/93‑1 (MQ=255)
aTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgc > 1:3939504/1‑93 (MQ=255)
aTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgc < 1:3207473/93‑1 (MQ=255)
aTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgc < 2:3094314/93‑1 (MQ=255)
tCCCGCAAATGACGAATGGATACGCCATCGCGTAACTCTCCCCCATCTGATCGGCCATTTCCATTGGTGTCCCCAGGTCGCGCAAAATctgct < 1:3432620/93‑1 (MQ=255)
cccGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgctg > 2:2800564/1‑93 (MQ=255)
cccGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgctg < 1:4188856/93‑1 (MQ=255)
cccGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgctg < 2:1792640/93‑1 (MQ=255)
cGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgcc > 2:3713685/1‑93 (MQ=255)
gCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccc < 2:1335587/93‑1 (MQ=255)
gCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccc > 2:184788/1‑93 (MQ=255)
gCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccc > 1:2368853/1‑93 (MQ=255)
gaaaTTCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccct < 1:115914/92‑1 (MQ=255)
cAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccct < 2:1641038/93‑1 (MQ=255)
cAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccct > 2:4653587/1‑93 (MQ=255)
aTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgcc < 1:4127136/93‑1 (MQ=255)
cGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCa > 1:684166/1‑93 (MQ=255)
gAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAg < 2:3691790/93‑1 (MQ=255)
gAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAg > 1:824693/1‑93 (MQ=255)
gAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAg < 1:138092/93‑1 (MQ=255)
aaTGTATACGCCATCGCGTACCTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAgc < 2:1069305/93‑1 (MQ=255)
aaTGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAgc > 2:259469/1‑93 (MQ=255)
tGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAgcgc < 2:2231784/93‑1 (MQ=255)
ggATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCt < 2:3577706/93‑1 (MQ=255)
gATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTg < 1:2412410/93‑1 (MQ=255)
aTACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTgg < 2:1552008/93‑1 (MQ=255)
aTACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTgg < 2:17586/93‑1 (MQ=255)
tACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGc < 1:480993/93‑1 (MQ=255)
tACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGc < 1:3081020/93‑1 (MQ=255)
gCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTa < 2:4217833/93‑1 (MQ=255)
gCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTa > 1:4503246/1‑93 (MQ=255)
gCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTa > 1:4293157/1‑93 (MQ=255)
ccATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAt > 2:250669/1‑93 (MQ=255)
ccATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAt < 1:1476874/93‑1 (MQ=255)
cATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAtt > 1:1953331/1‑93 (MQ=255)
tCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTgg > 1:3714244/1‑93 (MQ=255)
cgcgTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGt < 2:3823320/93‑1 (MQ=255)
gTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAc < 2:3534240/93‑1 (MQ=255)
gTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAc > 1:1616476/1‑93 (MQ=255)
gTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAc > 1:2938537/1‑93 (MQ=255)
gTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAc > 1:3007085/1‑93 (MQ=255)
tAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAcc > 2:211955/1‑93 (MQ=255)
tCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAc > 2:1151621/1‑93 (MQ=255)
tCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAc > 1:3597698/1‑93 (MQ=255)
tCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAc > 2:2980782/1‑93 (MQ=255)
|
TCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCATCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC > NC_000913/3863339‑3863518
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCATCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCACCGGA > NC_000913/3863336‑3863522
|
CTGTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCAC < SRR4302535.4701091/94‑1 (MQ=60)
CTGTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCAC > SRR4302535.875248/1‑94 (MQ=60)
TGTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACC > SRR4302535.917203/1‑94 (MQ=60)
TGTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACC > SRR4302535.870258/1‑94 (MQ=60)
GTCTCGCCATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCC < SRR4302535.4454533/94‑1 (MQ=60)
GTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCC < SRR4302535.29962/94‑1 (MQ=60)
GTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCC < SRR4302535.3091073/94‑1 (MQ=60)
CTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCC > SRR4302535.813744/1‑94 (MQ=60)
TCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCA > SRR4302535.2084188/1‑94 (MQ=60)
CGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCAT > SRR4302535.1212949/1‑94 (MQ=60)
CGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCAT < SRR4302535.4190634/94‑1 (MQ=60)
GACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATC > SRR4302535.3785071/1‑94 (MQ=60)
GACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATC > SRR4302535.3166267/1‑94 (MQ=60)
GACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATC > SRR4302535.4322034/1‑94 (MQ=60)
ACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCT > SRR4302535.2595241/1‑94 (MQ=60)
ACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCT < SRR4302535.4661784/94‑1 (MQ=60)
ACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAACCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCT < SRR4302535.1648874/94‑1 (MQ=60)
CATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTG < SRR4302535.3290640/94‑1 (MQ=60)
TTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGAT < SRR4302535.1971093/94‑1 (MQ=60)
TTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGAT < SRR4302535.1020509/94‑1 (MQ=60)
TGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATC > SRR4302535.1937076/1‑94 (MQ=60)
GACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCG > SRR4302535.3376784/1‑94 (MQ=60)
GGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACact > SRR4302535.1210732/1‑91 (MQ=60)
GAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATT > SRR4302535.4576961/1‑94 (MQ=60)
GAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATT > SRR4302535.1846817/1‑94 (MQ=60)
AAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCGTCTGATCGACCATTT > SRR4302535.2356294/1‑94 (MQ=60)
AAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTC > SRR4302535.2160267/1‑94 (MQ=60)
AAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTC < SRR4302535.2642530/94‑1 (MQ=60)
AAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTC < SRR4302535.1787669/94‑1 (MQ=60)
AATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGGCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCA > SRR4302535.3326740/1‑94 (MQ=60)
AATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCC > SRR4302535.2866134/1‑94 (MQ=60)
AATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCC > SRR4302535.1277056/1‑94 (MQ=60)
ATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCA > SRR4302535.1599280/1‑94 (MQ=60)
TAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAT < SRR4302535.1462003/94‑1 (MQ=60)
AACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATT > SRR4302535.1854324/1‑94 (MQ=60)
AACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATT < SRR4302535.4699596/94‑1 (MQ=60)
AACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATT > SRR4302535.855971/1‑94 (MQ=60)
ACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTG > SRR4302535.1951637/1‑94 (MQ=60)
CCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGG < SRR4302535.1629010/94‑1 (MQ=60)
CCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGG > SRR4302535.4115200/1‑94 (MQ=60)
CCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGG < SRR4302535.2757936/94‑1 (MQ=60)
CGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTG > SRR4302535.1053203/1‑94 (MQ=60)
CGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTG > SRR4302535.3495339/1‑94 (MQ=60)
CGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTG < SRR4302535.274703/94‑1 (MQ=60)
CGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTG < SRR4302535.1331010/94‑1 (MQ=60)
CAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTATCTCCCCCCCATCTGATCGACCATTTCCATTGGTGTA < SRR4302535.1297152/94‑1 (MQ=60)
CAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTA > SRR4302535.2052016/1‑94 (MQ=60)
AACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAC > SRR4302535.2020526/1‑94 (MQ=60)
AACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAC < SRR4302535.1191661/94‑1 (MQ=60)
ACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACC < SRR4302535.4317636/94‑1 (MQ=60)
CATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCC > SRR4302535.4017345/1‑94 (MQ=60)
CATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCC < SRR4302535.4069315/94‑1 (MQ=60)
CATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCC < SRR4302535.1199536/94‑1 (MQ=60)
ATCCAGATAGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCA < SRR4302535.1504776/94‑1 (MQ=60)
ATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGaccacgca > SRR4302535.3281680/1‑86 (MQ=60)
ATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCG > SRR4302535.1343924/1‑94 (MQ=60)
ATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCA > SRR4302535.316340/1‑94 (MQ=60)
ATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCA > SRR4302535.4217181/1‑94 (MQ=60)
ATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCA < SRR4302535.50675/94‑1 (MQ=60)
TCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAG > SRR4302535.3989422/1‑94 (MQ=60)
CCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGG > SRR4302535.2573622/1‑94 (MQ=60)
CCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGC > SRR4302535.2406546/1‑94 (MQ=60)
CACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGGCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAACCAGGT < SRR4302535.1112328/94‑1 (MQ=60)
CATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCG > SRR4302535.2189054/1‑94 (MQ=60)
CATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCG > SRR4302535.3808301/1‑94 (MQ=60)
ATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGC > SRR4302535.4660009/1‑94 (MQ=60)
TGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCGCCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCG > SRR4302535.652134/1‑94 (MQ=60)
TGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAA < SRR4302535.3565870/94‑1 (MQ=60)
ACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAAT > SRR4302535.2958008/1‑94 (MQ=60)
ACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAAT < SRR4302535.2365032/94‑1 (MQ=60)
ACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAAT > SRR4302535.2399298/1‑94 (MQ=60)
ACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAAT < SRR4302535.2894850/94‑1 (MQ=60)
CAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATC < SRR4302535.4425994/94‑1 (MQ=60)
CAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATC > SRR4302535.801227/1‑94 (MQ=60)
AATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGC < SRR4302535.1328685/94‑1 (MQ=60)
AATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGC > SRR4302535.2330829/1‑94 (MQ=60)
AATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGC > SRR4302535.3966389/1‑94 (MQ=60)
ATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCT < SRR4302535.3229688/94‑1 (MQ=60)
ATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCT > SRR4302535.3658750/1‑94 (MQ=60)
TCCCGCAAATGACGAATGGATACGCCATCGCGTAACTCTCCCCCATCTGATCGGCCATTTCCATTGGTGTCCCCAGGTCGCGCAAAATCTGCTG < SRR4302535.3456474/94‑1 (MQ=60)
CCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGC > SRR4302535.711131/1‑94 (MQ=60)
CCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGC > SRR4302535.2723616/1‑94 (MQ=60)
CCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGC < SRR4302535.4217527/94‑1 (MQ=60)
CCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGC > SRR4302535.3884879/1‑94 (MQ=60)
CCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCC > SRR4302535.659024/1‑94 (MQ=60)
CGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCC > SRR4302535.2385859/1‑94 (MQ=60)
GCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCT < SRR4302535.4322258/94‑1 (MQ=60)
GAAATTCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTG < SRR4302535.116727/94‑1 (MQ=60)
AATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCC > SRR4302535.3609168/1‑94 (MQ=60)
AATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGAACGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCC > SRR4302535.3317849/1‑94 (MQ=60)
ATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCC < SRR4302535.4155379/94‑1 (MQ=60)
TGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCC > SRR4302535.3922895/1‑94 (MQ=60)
GCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCC < SRR4302535.2966986/94‑1 (MQ=60)
CCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCA > SRR4302535.1137851/1‑94 (MQ=60)
CCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCA > SRR4302535.688954/1‑94 (MQ=60)
CGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAG < SRR4302535.3429839/94‑1 (MQ=60)
CGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAG > SRR4302535.830475/1‑94 (MQ=60)
GAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGC > SRR4302535.3031307/1‑94 (MQ=60)
GAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGC > SRR4302535.840233/1‑94 (MQ=60)
GAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGC < SRR4302535.139059/94‑1 (MQ=60)
GATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGG < SRR4302535.2429777/94‑1 (MQ=60)
ATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTTGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGC > SRR4302535.2077550/1‑94 (MQ=60)
ATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGC > SRR4302535.2900970/1‑94 (MQ=60)
TACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCG < SRR4302535.484366/94‑1 (MQ=60)
TACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCG < SRR4302535.3102498/94‑1 (MQ=60)
TACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCG < SRR4302535.2872648/94‑1 (MQ=60)
CGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTA > SRR4302535.4322534/1‑94 (MQ=60)
CGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTA < SRR4302535.3618231/94‑1 (MQ=60)
CGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTA > SRR4302535.4534167/1‑94 (MQ=60)
CCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATT < SRR4302535.1487449/94‑1 (MQ=60)
CCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATT > SRR4302535.1967390/1‑94 (MQ=60)
CATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTG > SRR4302535.2431796/1‑94 (MQ=60)
CATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTG < SRR4302535.1462449/94‑1 (MQ=60)
CATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTAGCGTATTG > SRR4302535.92765/1‑94 (MQ=60)
CATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGCCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTG > SRR4302535.803529/1‑94 (MQ=60)
ATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGG < SRR4302535.4290294/94‑1 (MQ=60)
ATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGG > SRR4302535.3739976/1‑94 (MQ=60)
ATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGG > SRR4302535.1432216/1‑94 (MQ=60)
CGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAC > SRR4302535.3028151/1‑94 (MQ=60)
CGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAC > SRR4302535.2959206/1‑94 (MQ=60)
CGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAC > SRR4302535.1628124/1‑94 (MQ=60)
GTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACC > SRR4302535.570840/1‑94 (MQ=60)
GTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACC > SRR4302535.1907518/1‑94 (MQ=60)
ACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCA < SRR4302535.212890/94‑1 (MQ=60)
CTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC < SRR4302535.4156436/94‑1 (MQ=60)
CTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC > SRR4302535.3622666/1‑94 (MQ=60)
CACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCACCG > SRR4302535.2678891/1‑94 (MQ=60)
CACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCACCG < SRR4302535.1786753/94‑1 (MQ=60)
CCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCACCGGA > SRR4302535.2806452/1‑94 (MQ=60)
|
CTGTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCATCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCACCGGA > NC_000913/3863336‑3863522
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
