Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,870,876 |
Δ1 bp |
coding (365/1764 nt) |
dgoA ← |
2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,870,875 | 0 | G | . | 100.0%
| 1093.6
/ NA
| 240 | coding (366/1764 nt) | dgoA | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (144/96); total (144/96) |
Only 100 of 262 total aligned reads displayed.
CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCA > NC_000913/3870783‑3870963
|
cAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcg > 1:2265940/1‑93 (MQ=255)
gACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgcgcc > 2:4409504/1‑89 (MQ=255)
aCTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGccc > 1:2326039/1‑93 (MQ=255)
tGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGc > 1:2775977/1‑93 (MQ=255)
tGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGc > 1:4587483/1‑93 (MQ=255)
gCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCt < 2:3856464/93‑1 (MQ=255)
gATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTc < 2:3685747/93‑1 (MQ=255)
gATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTc > 1:1774982/1‑93 (MQ=255)
gATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTc < 2:1841733/93‑1 (MQ=255)
aTGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCg > 1:4443860/1‑93 (MQ=255)
tGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCgg > 2:3921918/1‑92 (MQ=255)
tGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGa > 1:1289176/1‑93 (MQ=255)
tGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGa < 1:3160364/93‑1 (MQ=255)
tCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAgc < 1:2294874/93‑1 (MQ=255)
tCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAgc > 2:4628900/1‑93 (MQ=255)
tCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAgc < 1:3280867/93‑1 (MQ=255)
ccGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAgcg > 2:312775/1‑93 (MQ=255)
cGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAgcgc > 2:557253/1‑93 (MQ=255)
cGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAgcgc < 1:3748930/93‑1 (MQ=255)
gATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGcgcg > 2:1106406/1‑93 (MQ=255)
tGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGt > 1:1553355/1‑93 (MQ=255)
aaTACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAg > 1:1109089/1‑93 (MQ=255)
aaTACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAg > 1:3996724/1‑93 (MQ=255)
aTACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAgg < 1:1198576/93‑1 (MQ=255)
aTACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAgg > 2:927265/1‑93 (MQ=255)
aTACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAgg < 2:280176/93‑1 (MQ=255)
aTACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAgg > 2:509737/1‑93 (MQ=255)
aTACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAgg < 1:3599883/93‑1 (MQ=255)
tACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGc < 2:1736912/93‑1 (MQ=255)
tACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGc < 1:3215129/93‑1 (MQ=255)
tACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGc > 1:3471992/1‑93 (MQ=255)
cctcTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCtt < 2:1236289/90‑1 (MQ=255)
ccGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCtt > 2:4092315/1‑93 (MQ=255)
ccGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCtt < 1:4540928/93‑1 (MQ=255)
ccGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCtt > 1:4257880/1‑93 (MQ=255)
cGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTc < 1:75358/93‑1 (MQ=255)
gCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCg < 1:366455/93‑1 (MQ=255)
gCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCg > 2:1453172/1‑93 (MQ=255)
cTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCgg > 1:3895264/1‑93 (MQ=255)
cTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCgg > 1:2823708/1‑93 (MQ=255)
ttttAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGt < 2:1353339/93‑1 (MQ=255)
ttttAACGCTTTGATGTATTGCGGACCAAAAGACGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGAGAAGGGTTccgg > 2:3493541/1‑90 (MQ=255)
tttAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTc > 1:1977014/1‑93 (MQ=255)
tttAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTc < 2:799010/93‑1 (MQ=255)
aaCGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGcc > 2:3672126/1‑93 (MQ=255)
aCGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCg < 1:4386867/93‑1 (MQ=255)
gCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTc < 1:210420/93‑1 (MQ=255)
tttGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTcgc > 1:654846/1‑93 (MQ=255)
tttGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTcgc > 1:793253/1‑93 (MQ=255)
tttGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTcgc > 2:226408/1‑93 (MQ=255)
tttGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTcgc > 2:727635/1‑93 (MQ=255)
tttGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTcgc < 2:4336686/93‑1 (MQ=255)
tGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGc < 2:683524/93‑1 (MQ=255)
tGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGc < 2:955472/93‑1 (MQ=255)
tGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGc > 2:3568663/1‑93 (MQ=255)
tGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGc > 1:1926702/1‑93 (MQ=255)
cgTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGc > 1:611100/2‑93 (MQ=255)
gTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGcc > 1:2629223/1‑93 (MQ=255)
gTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGcc > 2:3019970/1‑93 (MQ=255)
gTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGcc < 2:2897176/93‑1 (MQ=255)
tATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCTGTAAAGGCTTCGGTCGCCGTCGCGCAGCCg < 1:4279714/93‑1 (MQ=255)
tATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCg > 1:4101828/1‑93 (MQ=255)
ttGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCggg < 1:3449448/93‑1 (MQ=255)
gCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGc > 1:1339363/1‑93 (MQ=255)
gCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGc < 1:4023535/93‑1 (MQ=255)
cGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCa < 1:4383516/93‑1 (MQ=255)
gACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGa < 2:2281094/93‑1 (MQ=255)
ccAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACg > 2:1334222/1‑93 (MQ=255)
aaaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGt < 1:1831385/93‑1 (MQ=255)
aaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTc > 2:3806679/1‑93 (MQ=255)
aaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTc > 2:1923325/1‑93 (MQ=255)
aaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCa > 2:2191973/1‑93 (MQ=255)
aGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCAt < 1:1644196/93‑1 (MQ=255)
cGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGcc < 1:921670/93‑1 (MQ=255)
cGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGcc > 2:1593127/1‑93 (MQ=255)
tGACGTAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTa < 2:2055573/93‑1 (MQ=255)
tGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTa > 2:3745945/1‑93 (MQ=255)
tGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTa < 1:936930/93‑1 (MQ=255)
tGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTa > 1:3862270/1‑93 (MQ=255)
gACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAg > 1:4643781/1‑93 (MQ=255)
aCGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGc > 1:1852540/1‑93 (MQ=255)
aCGGAAATATGTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGc < 2:2534413/93‑1 (MQ=255)
ggAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGccc > 2:2357125/1‑93 (MQ=255)
aaaTATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCAc < 2:663226/93‑1 (MQ=255)
aaTATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCAcc > 1:697353/1‑93 (MQ=255)
atatTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCg > 1:168131/1‑93 (MQ=255)
tatTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGc < 1:3517745/93‑1 (MQ=255)
ttttCAGCGCCTGC‑GCGCCTGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCGGGGGCAGACGGTCATGCCGTAGCCCACCGCAc < 1:2109443/93‑1 (MQ=255)
ttttCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAc > 1:1506435/1‑93 (MQ=255)
ttttCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAc > 2:3269664/1‑93 (MQ=255)
ttttCAGCGCCTGC‑CCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAc < 1:2996442/93‑1 (MQ=255)
ttctCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAc < 2:4249888/90‑1 (MQ=255)
tCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcggc < 1:2233925/93‑1 (MQ=255)
tCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcggc < 1:2000147/93‑1 (MQ=255)
tCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcagc > 1:1008996/1‑93 (MQ=255)
gcgcCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGa < 1:2947769/93‑1 (MQ=255)
gcgcCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGa > 2:3188593/1‑93 (MQ=255)
gcCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGAtc < 1:3208576/93‑1 (MQ=255)
ccTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGAtca < 1:3095844/93‑1 (MQ=255)
ccTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGAtca > 2:259996/1‑93 (MQ=255)
|
CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCA > NC_000913/3870783‑3870963
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTTC > NC_000913/3870783‑3870967
|
CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGC > SRR4302535.3489087/1‑94 (MQ=60)
CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGC > SRR4302535.1353241/1‑94 (MQ=60)
AAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGC > SRR4302535.868883/1‑94 (MQ=60)
GACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCC > SRR4302535.2342681/1‑94 (MQ=60)
ACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCG > SRR4302535.302861/1‑94 (MQ=60)
ACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCG > SRR4302535.3638547/1‑94 (MQ=60)
CTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGC > SRR4302535.2795740/1‑94 (MQ=60)
CTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGC > SRR4302535.4618720/1‑94 (MQ=60)
TGCGATGTCCGATGGCAATCCCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCT < SRR4302535.938195/94‑1 (MQ=60)
CGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTC > SRR4302535.1787840/1‑94 (MQ=60)
CGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTC > SRR4302535.4462018/1‑94 (MQ=60)
CGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCCGC‑GCGCCCGCTTC > SRR4302535.2033899/1‑94 (MQ=60)
GATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCG > SRR4302535.4474336/1‑94 (MQ=60)
ATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGA > SRR4302535.1298361/1‑94 (MQ=60)
TGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAG < SRR4302535.3182290/94‑1 (MQ=60)
GTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGC < SRR4302535.3758871/94‑1 (MQ=60)
TCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCG < SRR4302535.2311290/94‑1 (MQ=60)
TCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCG < SRR4302535.3303654/94‑1 (MQ=60)
TCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCG < SRR4302535.1796353/94‑1 (MQ=60)
CGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCG < SRR4302535.3774869/94‑1 (MQ=60)
ATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGT > SRR4302535.1564549/1‑94 (MQ=60)
TGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTA > SRR4302535.1347039/1‑94 (MQ=60)
TGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTA < SRR4302535.4292738/94‑1 (MQ=60)
TGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTA > SRR4302535.4084988/1‑94 (MQ=60)
GGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAA > SRR4302535.3258051/1‑94 (MQ=60)
CAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAG > SRR4302535.4024068/1‑94 (MQ=60)
CAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAG > SRR4302535.1117009/1‑94 (MQ=60)
AATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGG > SRR4302535.2279521/1‑94 (MQ=60)
AATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGG > SRR4302535.3088961/1‑94 (MQ=60)
AATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGG > SRR4302535.1976157/1‑94 (MQ=60)
ATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGC < SRR4302535.3624865/94‑1 (MQ=60)
ATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGC > SRR4302535.3496117/1‑94 (MQ=60)
ATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGC < SRR4302535.1207162/94‑1 (MQ=60)
ATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGC > SRR4302535.3919622/1‑94 (MQ=60)
TACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCT < SRR4302535.3237397/94‑1 (MQ=60)
ACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTT > SRR4302535.121255/1‑94 (MQ=60)
ACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTT > SRR4302535.3541637/1‑94 (MQ=60)
ACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTT > SRR4302535.485321/1‑94 (MQ=60)
ACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTT > SRR4302535.4287048/1‑94 (MQ=60)
ACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTT < SRR4302535.3943255/94‑1 (MQ=60)
CCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTC < SRR4302535.4571985/94‑1 (MQ=60)
CGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCG < SRR4302535.75908/94‑1 (MQ=60)
CGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCG > SRR4302535.1117670/1‑94 (MQ=60)
CGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCG < SRR4302535.2061322/94‑1 (MQ=60)
CGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCG < SRR4302535.2932159/94‑1 (MQ=60)
CGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCG > SRR4302535.1605680/1‑94 (MQ=60)
GCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGG > SRR4302535.3921960/1‑94 (MQ=60)
GCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGG < SRR4302535.4392465/94‑1 (MQ=60)
GCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGG > SRR4302535.2843751/1‑94 (MQ=60)
GCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGG < SRR4302535.368981/94‑1 (MQ=60)
TTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTC > SRR4302535.1991252/1‑94 (MQ=60)
TTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCG < SRR4302535.4266376/94‑1 (MQ=60)
TAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCC < SRR4302535.4672982/94‑1 (MQ=60)
AACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCG > SRR4302535.4046056/1‑94 (MQ=60)
AACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCG > SRR4302535.3896905/1‑94 (MQ=60)
AACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCG > SRR4302535.1836150/1‑94 (MQ=60)
AACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCG > SRR4302535.2443870/1‑94 (MQ=60)
ACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGT < SRR4302535.4414116/94‑1 (MQ=60)
ACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGT < SRR4302535.4416877/94‑1 (MQ=60)
CGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTC > SRR4302535.1028506/1‑94 (MQ=60)
CGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTC < SRR4302535.3575409/94‑1 (MQ=60)
GCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCG < SRR4302535.211866/94‑1 (MQ=60)
CTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGGCGTCGC > SRR4302535.1742549/1‑94 (MQ=60)
CTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGC > SRR4302535.2325253/1‑94 (MQ=60)
CTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGC > SRR4302535.659418/1‑94 (MQ=60)
CTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGC > SRR4302535.792866/1‑94 (MQ=60)
CTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGC > SRR4302535.798826/1‑94 (MQ=60)
TTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCG > SRR4302535.3233715/1‑94 (MQ=60)
TGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCA > SRR4302535.4535337/1‑94 (MQ=60)
TGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCA > SRR4302535.1722082/1‑94 (MQ=60)
GATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAG > SRR4302535.4529472/1‑94 (MQ=60)
ATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGC > SRR4302535.3505116/1‑94 (MQ=60)
ATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGC > SRR4302535.1305716/1‑94 (MQ=60)
ATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGC > SRR4302535.1940587/1‑94 (MQ=60)
ACGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGC > SRR4302535.615356/1‑94 (MQ=60)
TGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCC > SRR4302535.2648062/1‑94 (MQ=60)
GTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCG > SRR4302535.4129911/1‑94 (MQ=60)
GTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCG > SRR4302535.817275/1‑94 (MQ=60)
GTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCG > SRR4302535.2334759/1‑94 (MQ=60)
TATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCTGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGG < SRR4302535.4308999/94‑1 (MQ=60)
TATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGG < SRR4302535.1674419/94‑1 (MQ=60)
TATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGG > SRR4302535.1931601/1‑94 (MQ=60)
ATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGG > SRR4302535.2840965/1‑94 (MQ=60)
ATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGG < SRR4302535.2824412/94‑1 (MQ=60)
TTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGG < SRR4302535.3473429/94‑1 (MQ=60)
TTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGG > SRR4302535.2122160/1‑94 (MQ=60)
TGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGC > SRR4302535.1348920/1‑94 (MQ=60)
TGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGC < SRR4302535.2475280/94‑1 (MQ=60)
GCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCA < SRR4302535.4051063/94‑1 (MQ=60)
CGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAG > SRR4302535.4119094/1‑94 (MQ=60)
CGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAG < SRR4302535.4413504/94‑1 (MQ=60)
GGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGA > SRR4302535.3205829/1‑94 (MQ=60)
GGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGA > SRR4302535.2217875/1‑94 (MQ=60)
GGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGA > SRR4302535.4467875/1‑94 (MQ=60)
GACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGAC > SRR4302535.160802/1‑94 (MQ=60)
CAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGT < SRR4302535.4597726/94‑1 (MQ=60)
AAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTC < SRR4302535.1844601/94‑1 (MQ=60)
AAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCAT < SRR4302535.4396894/94‑1 (MQ=60)
AAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCAT > SRR4302535.1921607/1‑94 (MQ=60)
AGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATG < SRR4302535.4656501/94‑1 (MQ=60)
AGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATG < SRR4302535.1656081/94‑1 (MQ=60)
GCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGC > SRR4302535.2297712/1‑94 (MQ=60)
CCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCC < SRR4302535.3317300/94‑1 (MQ=60)
CGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCG < SRR4302535.928204/94‑1 (MQ=60)
CGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCG < SRR4302535.1369513/94‑1 (MQ=60)
CGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCG > SRR4302535.312325/1‑94 (MQ=60)
CGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCG > SRR4302535.2785396/1‑94 (MQ=60)
CGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCG > SRR4302535.3267512/1‑94 (MQ=60)
GATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGT > SRR4302535.2003880/1‑94 (MQ=60)
ATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTA > SRR4302535.3888844/1‑94 (MQ=60)
TGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAG < SRR4302535.781813/94‑1 (MQ=60)
TGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAG > SRR4302535.4675255/1‑94 (MQ=60)
TGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAG < SRR4302535.943566/94‑1 (MQ=60)
GACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGC > SRR4302535.1865885/1‑94 (MQ=60)
GGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCA > SRR4302535.2256358/1‑94 (MQ=60)
GAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCAC < SRR4302535.1953141/94‑1 (MQ=60)
AAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACC < SRR4302535.671644/94‑1 (MQ=60)
AAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACC > SRR4302535.702246/1‑94 (MQ=60)
AATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCG < SRR4302535.3321657/94‑1 (MQ=60)
AATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCG > SRR4302535.169299/1‑94 (MQ=60)
TATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCA < SRR4302535.3542182/94‑1 (MQ=60)
TATTTTCAGCGCCTGC‑GCACCCGCTTCGGGCGCGGTAAGGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTGGCCCACCGCA < SRR4302535.4717020/94‑1 (MQ=60)
ATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAC > SRR4302535.1855597/1‑94 (MQ=60)
ATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAC > SRR4302535.1517265/1‑94 (MQ=60)
TTTTCAGCGCCTGC‑GCGCCTGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCGGGGGCAGACGGTCATGCCGTAGCCCACCGCACG < SRR4302535.2124657/94‑1 (MQ=60)
TTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACG < SRR4302535.72941/94‑1 (MQ=60)
TTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACG < SRR4302535.1196175/94‑1 (MQ=60)
TTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACG < SRR4302535.3759589/94‑1 (MQ=60)
TTTTCAGCGCCTGC‑CCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACG < SRR4302535.3017452/94‑1 (MQ=60)
TTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGG < SRR4302535.3002438/94‑1 (MQ=60)
TTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGC < SRR4302535.1540874/94‑1 (MQ=60)
TTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACAGC > SRR4302535.1016166/1‑94 (MQ=60)
TCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCG < SRR4302535.2014560/94‑1 (MQ=60)
TCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCG < SRR4302535.2249815/94‑1 (MQ=60)
CAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGG > SRR4302535.3880113/1‑94 (MQ=60)
CAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGG > SRR4302535.633852/1‑94 (MQ=60)
AGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGA > SRR4302535.3556693/1‑94 (MQ=60)
GCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGAT > SRR4302535.2238695/1‑94 (MQ=60)
GCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGAT < SRR4302535.2968481/94‑1 (MQ=60)
CGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATC > SRR4302535.665033/1‑94 (MQ=60)
CGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATC > SRR4302535.3007568/1‑94 (MQ=60)
GCCTGC‑GCGGCCGCTTCGAGCGCGTTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCA < SRR4302535.3219574/94‑1 (MQ=60)
GCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCA < SRR4302535.3230799/94‑1 (MQ=60)
GCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCA < SRR4302535.4215707/94‑1 (MQ=60)
CCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCAC > SRR4302535.739937/1‑94 (MQ=60)
CCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCAC < SRR4302535.3117405/94‑1 (MQ=60)
CTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACT > SRR4302535.2449174/1‑94 (MQ=60)
CTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACT < SRR4302535.2338200/94‑1 (MQ=60)
CTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACT > SRR4302535.3721467/1‑94 (MQ=60)
CTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACT > SRR4302535.1191556/1‑94 (MQ=60)
TGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTT > SRR4302535.2881246/1‑94 (MQ=60)
TGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTT > SRR4302535.3100403/1‑94 (MQ=60)
gcGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTTC > SRR4302535.3483573/3‑94 (MQ=60)
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CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTTC > NC_000913/3870783‑3870967
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
