Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,897,445 |
T→C |
N265S (AAC→AGC) |
yieL ← |
putative xylanase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,897,445 | 0 | T | C | 100.0%
| 971.3
/ NA
| 302 | N265S (AAC→AGC) | yieL | putative xylanase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (162/140); total (162/140) |
Only 100 of 306 total aligned reads displayed.
TGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCC > NC_000913/3897355‑3897534
|
ggTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtca > 1:526461/1‑93 (MQ=255)
ggTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtca < 2:1229264/93‑1 (MQ=255)
ggTACCAGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtca > 2:1511124/1‑93 (MQ=255)
gTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcat > 1:73336/1‑93 (MQ=255)
tACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatc < 2:865254/93‑1 (MQ=255)
tACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatc > 1:4005198/1‑93 (MQ=255)
tACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatc < 2:4482040/93‑1 (MQ=255)
aCCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatca < 1:258997/93‑1 (MQ=255)
cccGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAg < 2:2181322/93‑1 (MQ=255)
cccGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAg < 1:1456051/93‑1 (MQ=255)
cccGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGAATAATATCGCTCATCAg < 2:4237089/93‑1 (MQ=255)
ccGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGt > 2:2091343/1‑93 (MQ=255)
gCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTc < 2:65414/93‑1 (MQ=255)
gCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTc < 1:4324613/93‑1 (MQ=255)
cTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTcgc > 1:4468246/1‑93 (MQ=255)
ttGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTcgcg > 2:479132/1‑93 (MQ=255)
gtgAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGAt > 2:4024837/1‑93 (MQ=255)
tgAAAGCCCTGCCAGCGCTCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATc < 1:2251916/93‑1 (MQ=255)
tgAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATc > 1:818275/1‑93 (MQ=255)
gCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCg > 1:1554105/1‑93 (MQ=255)
ccTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCt < 1:2052953/93‑1 (MQ=255)
cTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCtt < 1:4603055/93‑1 (MQ=255)
gCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTa < 1:1944310/93‑1 (MQ=255)
gCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGAGGGATAATATCGCTAATCAGTTCGCGATCTGCCGCttaa > 2:3838226/1‑91 (MQ=255)
cAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGc < 1:4235200/93‑1 (MQ=255)
aGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCa < 1:2873922/93‑1 (MQ=255)
aGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCa < 2:1833416/93‑1 (MQ=255)
gcgcgcGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCAt < 1:3244912/93‑1 (MQ=255)
gCCATCGGAATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCgg < 2:4515415/93‑1 (MQ=255)
ccATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGa < 2:3777287/93‑1 (MQ=255)
ccATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGa < 2:1339539/93‑1 (MQ=255)
ccATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGa < 2:3135233/93‑1 (MQ=255)
ccATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGa < 1:2081705/93‑1 (MQ=255)
cATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGAt < 1:4387943/93‑1 (MQ=255)
cATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGAt > 2:585999/1‑93 (MQ=255)
aTCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATa > 1:4122702/1‑93 (MQ=255)
aTCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATa > 2:1888763/1‑93 (MQ=255)
tCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATaa < 1:1888704/93‑1 (MQ=255)
gCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAg > 2:2248024/1‑93 (MQ=255)
cATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGa > 1:3087236/1‑93 (MQ=255)
aTCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAc < 2:3254317/93‑1 (MQ=255)
aTCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAc < 1:2858869/93‑1 (MQ=255)
aTCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAc < 1:2759739/93‑1 (MQ=255)
aTCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAc < 1:4527661/93‑1 (MQ=255)
aTCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAc > 2:4402597/1‑93 (MQ=255)
tCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACt > 2:2557960/1‑93 (MQ=255)
tCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACt < 2:2929734/93‑1 (MQ=255)
tCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACt > 2:892063/1‑93 (MQ=255)
tCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACt < 1:2210954/93‑1 (MQ=255)
tCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACt > 1:1817026/1‑93 (MQ=255)
cTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACtt < 1:4201712/93‑1 (MQ=255)
tttACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACttt > 1:3032944/1‑93 (MQ=255)
tttACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACttt < 2:1599472/93‑1 (MQ=255)
tttACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACttt > 2:3539174/1‑93 (MQ=255)
ttACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTa < 1:1327060/93‑1 (MQ=255)
tcGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACg < 1:3361782/92‑1 (MQ=255)
aCGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACg > 2:4640676/1‑93 (MQ=255)
cGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGt > 1:3110679/1‑93 (MQ=255)
cGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGt > 2:1639575/1‑93 (MQ=255)
ggACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGtt > 1:2986954/1‑92 (MQ=255)
ggACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTc > 2:782697/1‑93 (MQ=255)
aCATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCtt < 2:3314356/93‑1 (MQ=255)
aCATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCtt < 1:3415891/93‑1 (MQ=255)
aTTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTc < 1:1686849/93‑1 (MQ=255)
aTTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTc > 2:274278/1‑93 (MQ=255)
ttAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTcc > 1:4037767/1‑93 (MQ=255)
ttAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTcc < 1:3564013/93‑1 (MQ=255)
aaaaCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTg > 1:2479509/1‑93 (MQ=255)
aCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAgg > 2:3430594/1‑93 (MQ=255)
cGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGc > 1:3224600/1‑93 (MQ=255)
gCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCa > 2:722231/1‑93 (MQ=255)
cTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCAc > 1:3917109/1‑93 (MQ=255)
gCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGaa > 2:260392/1‑93 (MQ=255)
gCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGaa < 2:2966546/93‑1 (MQ=255)
cTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTTAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGaaa < 2:2621972/93‑1 (MQ=255)
cTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGaaa > 2:2483828/1‑93 (MQ=255)
cTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGaaa > 1:3966328/1‑93 (MQ=255)
cTAATCAGCGGCATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGaaa < 1:124617/93‑1 (MQ=255)
aaTCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATc < 2:4145119/93‑1 (MQ=255)
aTCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCACTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCt < 1:1011980/93‑1 (MQ=255)
aTCAGCGGAATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCt < 2:3990318/93‑1 (MQ=255)
tCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCtt > 2:3666562/1‑93 (MQ=255)
aGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCg > 1:915451/1‑93 (MQ=255)
aGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCg > 1:3597668/1‑93 (MQ=255)
cGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCggg > 2:1996726/1‑93 (MQ=255)
cGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCggg > 1:662700/1‑93 (MQ=255)
gggATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGa > 2:2574732/1‑93 (MQ=255)
gggATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGa > 1:12178/1‑93 (MQ=255)
ggcataataTCGCTCATCAGCTCGCGATCTGCCGCTTAACCATTCAGCGGATAAACGACTTTACGTCTTACCTGAGGCACGAAACCTTCGGGa < 2:1012603/90‑1 (MQ=255)
ggATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaa > 2:4230978/1‑93 (MQ=255)
ggATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaa > 2:3211580/1‑93 (MQ=255)
ggATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaa > 2:2302205/1‑93 (MQ=255)
ggATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaa > 2:1203525/1‑93 (MQ=255)
taataTCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaataa < 1:4157168/93‑1 (MQ=255)
aataTCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaataat < 1:3485455/93‑1 (MQ=255)
aataTCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaataat < 1:2403353/93‑1 (MQ=255)
atCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGcc > 1:2287742/1‑93 (MQ=255)
tCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCGCGAAATCTTCGGGAATAATGccc < 1:4674576/93‑1 (MQ=255)
tCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGccc < 1:3721773/93‑1 (MQ=255)
tCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGccc < 1:2715694/93‑1 (MQ=255)
|
TGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCC > NC_000913/3897355‑3897534
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTCG > NC_000913/3897353‑3897538
|
CCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCT > SRR4302535.3174977/1‑94 (MQ=60)
CTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTC > SRR4302535.257927/1‑94 (MQ=60)
TGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCA < SRR4302535.407361/94‑1 (MQ=60)
TGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCA > SRR4302535.530139/1‑94 (MQ=60)
GGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCAT > SRR4302535.73868/1‑94 (MQ=60)
GTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATC > SRR4302535.4032596/1‑94 (MQ=60)
GTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATC > SRR4302535.467172/1‑94 (MQ=60)
TACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCA < SRR4302535.2012062/94‑1 (MQ=60)
TACCAGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCA < SRR4302535.3978622/94‑1 (MQ=60)
TCCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAG < SRR4302535.917708/94‑1 (MQ=60)
ACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAG < SRR4302535.260788/94‑1 (MQ=60)
CCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGT < SRR4302535.1466473/94‑1 (MQ=60)
CCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGT > SRR4302535.3713340/1‑94 (MQ=60)
CCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGT > SRR4302535.1777129/1‑94 (MQ=60)
CCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTT > SRR4302535.2273949/1‑94 (MQ=60)
CGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTC < SRR4302535.2968232/94‑1 (MQ=60)
CGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTC > SRR4302535.473352/1‑94 (MQ=60)
CGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTC > SRR4302535.3864461/1‑94 (MQ=60)
CGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTC > SRR4302535.1861582/1‑94 (MQ=60)
GCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCG < SRR4302535.4354192/94‑1 (MQ=60)
GCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCG < SRR4302535.1372330/94‑1 (MQ=60)
GCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCG < SRR4302535.3613474/94‑1 (MQ=60)
CCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGC < SRR4302535.4200866/94‑1 (MQ=60)
CCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGC > SRR4302535.4498903/1‑94 (MQ=60)
GTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATC > SRR4302535.824017/1‑94 (MQ=60)
TGAAAGCCCTGCCAGCGCTCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCT < SRR4302535.2267952/94‑1 (MQ=60)
TGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCT < SRR4302535.342172/94‑1 (MQ=60)
TGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCT > SRR4302535.2888873/1‑94 (MQ=60)
TGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCT < SRR4302535.920951/94‑1 (MQ=60)
AAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCC < SRR4302535.4026041/94‑1 (MQ=60)
AAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCC > SRR4302535.1906295/1‑94 (MQ=60)
AAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCC < SRR4302535.4183254/94‑1 (MQ=60)
AGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCG > SRR4302535.3029811/1‑94 (MQ=60)
AGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCG > SRR4302535.1565302/1‑94 (MQ=60)
CCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTT < SRR4302535.2067737/94‑1 (MQ=60)
CTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTT > SRR4302535.1513002/1‑94 (MQ=60)
CTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTT < SRR4302535.2076227/94‑1 (MQ=60)
CTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTT < SRR4302535.4634355/94‑1 (MQ=60)
TGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTA < SRR4302535.270466/94‑1 (MQ=60)
TGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTA < SRR4302535.3613546/94‑1 (MQ=60)
TGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTA < SRR4302535.3439671/94‑1 (MQ=60)
TGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTA < SRR4302535.2384482/94‑1 (MQ=60)
GCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAG < SRR4302535.3255464/94‑1 (MQ=60)
GCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAG < SRR4302535.1958310/94‑1 (MQ=60)
GCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAG < SRR4302535.684200/94‑1 (MQ=60)
CAGCGCGCGGCCATCTGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCA < SRR4302535.1458121/94‑1 (MQ=60)
CAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCT > SRR4302535.1262715/1‑94 (MQ=60)
CAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCA < SRR4302535.4264187/94‑1 (MQ=60)
AGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCAT < SRR4302535.2894287/94‑1 (MQ=60)
AGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCAT > SRR4302535.418324/1‑94 (MQ=60)
GCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATT < SRR4302535.3267449/94‑1 (MQ=60)
GCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATT < SRR4302535.4302021/94‑1 (MQ=60)
CGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTC < SRR4302535.319669/94‑1 (MQ=60)
CGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTC < SRR4302535.3587632/94‑1 (MQ=60)
CGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAG < SRR4302535.4047090/94‑1 (MQ=60)
GGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGG > SRR4302535.4249172/1‑94 (MQ=60)
CCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGAT < SRR4302535.2096703/94‑1 (MQ=60)
CATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATA > SRR4302535.2657350/1‑94 (MQ=60)
CATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATA < SRR4302535.4417958/94‑1 (MQ=60)
CATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATA > SRR4302535.4150912/1‑94 (MQ=60)
CTCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAA < SRR4302535.1585098/94‑1 (MQ=60)
ATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAA > SRR4302535.3202481/1‑94 (MQ=60)
ATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAA > SRR4302535.2065591/1‑94 (MQ=60)
TCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAA < SRR4302535.1902309/94‑1 (MQ=60)
CGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAA > SRR4302535.512664/1‑94 (MQ=60)
CGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAA > SRR4302535.4362395/1‑94 (MQ=60)
GGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAG < SRR4302535.2882686/94‑1 (MQ=60)
GCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGA > SRR4302535.3108737/1‑94 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC < SRR4302535.2347724/94‑1 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC < SRR4302535.2092954/94‑1 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC > SRR4302535.739482/1‑94 (MQ=60)
ATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACT < SRR4302535.4558671/94‑1 (MQ=60)
ATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACT > SRR4302535.112507/1‑94 (MQ=60)
ATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACT < SRR4302535.2779406/94‑1 (MQ=60)
ATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACT < SRR4302535.2879123/94‑1 (MQ=60)
ATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACT > SRR4302535.1830158/1‑94 (MQ=60)
TCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTT > SRR4302535.3708614/1‑94 (MQ=60)
TCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTT > SRR4302535.247843/1‑94 (MQ=60)
TCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTT < SRR4302535.2226704/94‑1 (MQ=60)
TCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTT < SRR4302535.2140013/94‑1 (MQ=60)
CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTT > SRR4302535.4253645/1‑94 (MQ=60)
CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTT < SRR4302535.4107797/94‑1 (MQ=60)
CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTT < SRR4302535.3523156/94‑1 (MQ=60)
CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTT < SRR4302535.4230460/94‑1 (MQ=60)
CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTT > SRR4302535.3054175/1‑94 (MQ=60)
CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTT > SRR4302535.2967294/1‑94 (MQ=60)
TTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTAC < SRR4302535.1336530/94‑1 (MQ=60)
TTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTAC < SRR4302535.465064/94‑1 (MQ=60)
TCGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGT < SRR4302535.3385177/94‑1 (MQ=60)
ACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGT > SRR4302535.3132336/1‑94 (MQ=60)
ACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGT < SRR4302535.4478457/94‑1 (MQ=60)
CGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTT > SRR4302535.3007902/1‑94 (MQ=60)
GGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCT < SRR4302535.2157400/94‑1 (MQ=60)
GGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCT > SRR4302535.12695/1‑94 (MQ=60)
GACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTT > SRR4302535.531896/1‑94 (MQ=60)
GACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTT < SRR4302535.4025815/94‑1 (MQ=60)
GACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTT < SRR4302535.4573045/94‑1 (MQ=60)
ACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTT < SRR4302535.3439653/94‑1 (MQ=60)
ACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTT < SRR4302535.122982/94‑1 (MQ=60)
ATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATATAAGACTTTACGTCTTTCC > SRR4302535.3009509/1‑94 (MQ=60)
ATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCC > SRR4302535.4065405/1‑94 (MQ=60)
ATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCC < SRR4302535.1699061/94‑1 (MQ=60)
ATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCC > SRR4302535.3846816/1‑94 (MQ=60)
TTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCT < SRR4302535.4630921/94‑1 (MQ=60)
TTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCT < SRR4302535.3588725/94‑1 (MQ=60)
TAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTG > SRR4302535.936317/1‑94 (MQ=60)
TAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTG < SRR4302535.1941804/94‑1 (MQ=60)
TAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTG > SRR4302535.2497391/1‑94 (MQ=60)
ACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGC > SRR4302535.334953/1‑94 (MQ=60)
ACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGC > SRR4302535.3246953/1‑94 (MQ=60)
ACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGC < SRR4302535.4558434/94‑1 (MQ=60)
CGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCA > SRR4302535.1531436/1‑94 (MQ=60)
GCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCAC > SRR4302535.3943912/1‑94 (MQ=60)
GCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCAC > SRR4302535.3069409/1‑94 (MQ=60)
GCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAA > SRR4302535.3993420/1‑94 (MQ=60)
GCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAA > SRR4302535.3960280/1‑94 (MQ=60)
GCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAA > SRR4302535.4049480/1‑94 (MQ=60)
CTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAAT > SRR4302535.312558/1‑94 (MQ=60)
CTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAAT > SRR4302535.2811206/1‑94 (MQ=60)
CTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAAT > SRR4302535.341916/1‑94 (MQ=60)
CTAATCAGCGGCATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAAT < SRR4302535.125493/94‑1 (MQ=60)
AATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCT > SRR4302535.243977/1‑94 (MQ=60)
AATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCT > SRR4302535.3256738/1‑94 (MQ=60)
ATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTT < SRR4302535.2829274/94‑1 (MQ=60)
ATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTT > SRR4302535.3750483/1‑94 (MQ=60)
ATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTT > SRR4302535.4210706/1‑94 (MQ=60)
ATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCACTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTT < SRR4302535.1019172/94‑1 (MQ=60)
TCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTC < SRR4302535.3280206/94‑1 (MQ=60)
CAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCG > SRR4302535.921951/1‑94 (MQ=60)
CAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCG > SRR4302535.3622635/1‑94 (MQ=60)
AGCGGTATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGG < SRR4302535.31199/94‑1 (MQ=60)
AGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGTGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGG < SRR4302535.2527088/94‑1 (MQ=60)
AGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGG < SRR4302535.2280647/94‑1 (MQ=60)
GCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGG > SRR4302535.1693558/1‑94 (MQ=60)
GCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGG > SRR4302535.667328/1‑94 (MQ=60)
GGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGA < SRR4302535.2241513/94‑1 (MQ=60)
CGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGA > SRR4302535.4348470/1‑94 (MQ=60)
CGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGA > SRR4302535.2764996/1‑94 (MQ=60)
CGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGA > SRR4302535.56213/1‑94 (MQ=60)
CGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGA > SRR4302535.12270/1‑94 (MQ=60)
CGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGA > SRR4302535.71808/1‑94 (MQ=60)
GGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAA > SRR4302535.1719384/1‑94 (MQ=60)
GATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATA > SRR4302535.3057368/1‑94 (MQ=60)
GATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATA > SRR4302535.78362/1‑94 (MQ=60)
GATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATA > SRR4302535.1250063/1‑94 (MQ=60)
ATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAA > SRR4302535.4431479/1‑94 (MQ=60)
ATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAA < SRR4302535.4551268/94‑1 (MQ=60)
ATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAA > SRR4302535.2758212/1‑94 (MQ=60)
TAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAAT < SRR4302535.4386752/94‑1 (MQ=60)
TAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAAT < SRR4302535.4185624/94‑1 (MQ=60)
AATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATG < SRR4302535.1840079/94‑1 (MQ=60)
AATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATG < SRR4302535.3509653/94‑1 (MQ=60)
AATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATG < SRR4302535.2420641/94‑1 (MQ=60)
AATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCAGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATG > SRR4302535.2538633/1‑94 (MQ=60)
ATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGACTAATGC > SRR4302535.948493/1‑94 (MQ=60)
ATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGC > SRR4302535.701020/1‑94 (MQ=60)
ATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGC > SRR4302535.1126885/1‑94 (MQ=60)
TATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCC > SRR4302535.2304083/1‑94 (MQ=60)
ATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCC > SRR4302535.2266605/1‑94 (MQ=60)
ATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCC > SRR4302535.3461269/1‑94 (MQ=60)
TCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCGCGAAATCTTCGGGAATAATGCCCT < SRR4302535.4706136/94‑1 (MQ=60)
TCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCT < SRR4302535.3747557/94‑1 (MQ=60)
TCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCT < SRR4302535.2735094/94‑1 (MQ=60)
CGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTT < SRR4302535.2534589/94‑1 (MQ=60)
CTCATTAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTCG > SRR4302535.593163/1‑94 (MQ=60)
CTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTCG > SRR4302535.122496/1‑94 (MQ=60)
CTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTCG < SRR4302535.3565536/94‑1 (MQ=60)
CTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTCG < SRR4302535.2097980/94‑1 (MQ=60)
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CCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTCG > NC_000913/3897353‑3897538
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
