Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,931,938 |
T→C |
S179P (TCC→CCC) |
rbsA → |
ATP‑binding component of D‑ribose high‑affinity transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,931,938 | 0 | T | C | 99.5%
| 649.4
/ NA
| 210 | S179P (TCC→CCC) | rbsA | ATP‑binding component of D‑ribose high‑affinity transport system |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (108/101); minor base A (1/0); total (109/101) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 226 total aligned reads displayed.
TGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAATCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGC > NC_000913/3931849‑3932027
|
tGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAAcccc > 2:4400025/1‑93 (MQ=255)
tGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAAcccc < 2:467171/93‑1 (MQ=255)
tGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAAcccc < 1:1902324/93‑1 (MQ=255)
ggTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCt > 1:1075141/1‑93 (MQ=255)
ggTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCt < 1:2436358/93‑1 (MQ=255)
gTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTg > 2:677873/1‑93 (MQ=255)
ttGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGt < 1:4331411/93‑1 (MQ=255)
gtGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGt < 1:1610813/92‑1 (MQ=255)
gAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTc > 1:3635866/1‑93 (MQ=255)
gAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTc > 1:2249621/1‑93 (MQ=255)
aaTCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCcg > 1:1445162/1‑93 (MQ=255)
aTCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCcgc > 2:2094758/1‑93 (MQ=255)
aTCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCcgc < 1:368330/93‑1 (MQ=255)
cGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGt > 1:2373898/1‑93 (MQ=255)
gCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTc > 1:1962945/1‑93 (MQ=255)
gCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTc > 1:2883246/1‑93 (MQ=255)
ccAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCa < 2:1452012/93‑1 (MQ=255)
ccAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCa > 1:2580020/1‑93 (MQ=255)
cAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCAt < 2:1753793/93‑1 (MQ=255)
cAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCAt < 1:3017296/93‑1 (MQ=255)
aaaGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATc > 2:2691250/1‑93 (MQ=255)
aaGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATcc > 2:3778113/1‑93 (MQ=255)
aaGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATcc < 2:444718/93‑1 (MQ=255)
aaGGGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTCCCGCGTCATcc > 2:694492/1‑93 (MQ=255)
aGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCcg < 1:2035558/93‑1 (MQ=255)
aGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCcg > 1:3983798/1‑93 (MQ=255)
gTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCcgc > 2:19632/1‑93 (MQ=255)
gTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCcgc < 1:3945393/93‑1 (MQ=255)
gCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGa > 2:117668/1‑93 (MQ=255)
gCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGa < 1:591469/93‑1 (MQ=255)
gCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGa < 2:264194/93‑1 (MQ=255)
cTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAg > 1:3484803/1‑93 (MQ=255)
tGAGCTTTGAGTCGAAAGTCATCATTCTGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGc < 2:3792415/93‑1 (MQ=255)
tGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGc < 2:2740457/93‑1 (MQ=255)
gCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGa > 2:2313817/1‑93 (MQ=255)
gCTTTGAGTCGAAAGTCATCATTATGGATGAACCAACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGa > 2:3656022/1‑93 (MQ=255)
tttGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGaaa < 2:706463/93‑1 (MQ=255)
tttGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGaaa > 2:318919/1‑93 (MQ=255)
tttGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGaaa > 1:3083560/1‑93 (MQ=255)
tttGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGaaa > 2:1409397/1‑93 (MQ=255)
tGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATc < 1:187111/93‑1 (MQ=255)
tCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCaa > 2:3102802/1‑93 (MQ=255)
tCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCaa < 1:1498714/93‑1 (MQ=255)
cGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAg < 2:4228203/93‑1 (MQ=255)
gAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAgg > 2:515241/1‑93 (MQ=255)
aaaGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGc < 1:3842652/93‑1 (MQ=255)
gTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACTGAACCCCTGTTCCGCGTCATCCGCGCGCTGAAATCGCAAGGCcgc > 1:2156821/1‑93 (MQ=255)
gTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCcgc < 1:2983625/93‑1 (MQ=255)
tcatcaTTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCcgcg > 1:4170602/1‑93 (MQ=255)
catTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTAt > 1:4278306/1‑93 (MQ=255)
atTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGATCTGAAATCGCAAGGCCGCGGTAtt > 2:3698421/1‑93 (MQ=255)
attgATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTc > 1:3879520/4‑93 (MQ=255)
aTGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTc < 2:2178718/93‑1 (MQ=255)
aTGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTc < 2:1034086/93‑1 (MQ=255)
tGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCt > 2:3043220/1‑93 (MQ=255)
gggATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCt > 2:4503846/2‑93 (MQ=255)
ggATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCta > 1:919887/1‑93 (MQ=255)
ggATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCta < 1:544292/93‑1 (MQ=255)
ggATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCta < 1:4204096/93‑1 (MQ=255)
ggATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCta < 1:2637312/93‑1 (MQ=255)
gATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCtat > 2:3515747/1‑93 (MQ=255)
gAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATAtc < 1:4410327/93‑1 (MQ=255)
gAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATAtc < 1:3275701/93‑1 (MQ=255)
gAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATAtc < 1:1017554/93‑1 (MQ=255)
gAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATAtc > 1:710156/1‑93 (MQ=255)
aaCCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATAtct > 2:1206835/1‑93 (MQ=255)
accgaccgATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATAtctc > 2:813806/1‑93 (MQ=255)
gaccgaTGCACTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCa < 1:4015018/93‑1 (MQ=255)
gaTGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGc > 1:2810216/1‑93 (MQ=255)
gaTGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGc > 1:2737064/1‑93 (MQ=255)
gaTGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGc > 1:1758019/1‑93 (MQ=255)
gaTGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGc > 2:1557327/1‑93 (MQ=255)
aTGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCa > 2:3014503/1‑93 (MQ=255)
tGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCAt < 1:4406734/93‑1 (MQ=255)
gcgcTGACCGATTCCGAACCCTAACCGCTGTTCCGCGTCATCCGCGAGCTGAAATCGGAAGGCCGCGGTATTGTCTATATCTCCCACCGCATg < 2:769635/93‑1 (MQ=255)
cgcTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATga < 1:4364088/93‑1 (MQ=255)
cTGACCGATACCGAAACCGAACCCCTGTTCGGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATgaaa < 2:1501311/93‑1 (MQ=255)
cTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATgaaa < 2:2444561/93‑1 (MQ=255)
cTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATgaaa < 2:4100911/93‑1 (MQ=255)
tGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATgaaag < 1:1787777/93‑1 (MQ=255)
tGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATgaaag > 1:2625968/1‑93 (MQ=255)
cgaccgagaccgaAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATgaaag < 1:3140082/92‑1 (MQ=255)
gACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATgaaaga < 2:3352843/93‑1 (MQ=255)
aCCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATgaaagaa > 1:4134198/1‑93 (MQ=255)
aCCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATgaaagaa < 1:3643660/93‑1 (MQ=255)
ccGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCCTgaaagaaa > 2:645553/1‑93 (MQ=255)
ccGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATgaaagaaa > 1:2545378/1‑93 (MQ=255)
ccGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATcacagaaa > 1:3366797/1‑93 (MQ=255)
ccGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACAGCATgaaagaaa < 2:2832515/93‑1 (MQ=255)
ccGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGGATTGTCTATATCTCCCACCGCATgaaagaaa > 2:2005924/1‑93 (MQ=255)
gATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATc < 2:1946476/93‑1 (MQ=255)
aTACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCt > 1:3537687/1‑93 (MQ=255)
aTACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCt < 2:1113401/93‑1 (MQ=255)
aTACCGAAACCGAACCCCTGTCCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCt < 1:1642517/93‑1 (MQ=255)
accgaaaccgaaCCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTc < 2:2547162/93‑1 (MQ=255)
aaaccgaaCCCCTGTTCCGGGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCgaga < 2:84743/93‑1 (MQ=255)
aaccgaaCCCCTGTTCCGCGTCATCAGCGAGCTGAAATCGCAAGGGCGCGGTATTGTCTATATCTCGCACCGCATGAAATAAATCTTCGAGAt > 2:2923899/1‑93 (MQ=255)
accgaaCCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGAtt < 2:4375531/93‑1 (MQ=255)
ccgaaCCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGAttt < 2:1529460/93‑1 (MQ=255)
gaaCCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGc < 2:1240990/93‑1 (MQ=255)
|
TGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAATCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGC > NC_000913/3931849‑3932027
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAATGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAATCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGATG > NC_000913/3931845‑3932031
|
CAAATGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAAC > SRR4302535.3587052/1‑94 (MQ=60)
AAATGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACC > SRR4302535.2209285/1‑94 (MQ=60)
AAATGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACC > SRR4302535.108550/1‑94 (MQ=60)
ATGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGATCGATACCGAAACCGAACCCC > SRR4302535.3149432/1‑94 (MQ=60)
TGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCT > SRR4302535.1082782/1‑94 (MQ=60)
TGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCT < SRR4302535.1916016/94‑1 (MQ=60)
GGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTG < SRR4302535.2453915/94‑1 (MQ=60)
GGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTG > SRR4302535.3403264/1‑94 (MQ=60)
TTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTT < SRR4302535.4361034/94‑1 (MQ=60)
TTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTT > SRR4302535.1944267/1‑94 (MQ=60)
GTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTT < SRR4302535.1622426/94‑1 (MQ=60)
TGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTC > SRR4302535.2265638/1‑94 (MQ=60)
TGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTC > SRR4302535.3661062/1‑94 (MQ=60)
TGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTC < SRR4302535.2650931/94‑1 (MQ=60)
AAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCG > SRR4302535.1455497/1‑94 (MQ=60)
ATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCG < SRR4302535.370873/94‑1 (MQ=60)
TCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGT > SRR4302535.2390951/1‑94 (MQ=60)
TCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGT < SRR4302535.2755416/94‑1 (MQ=60)
CGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTC > SRR4302535.1977099/1‑94 (MQ=60)
CGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTC > SRR4302535.2903651/1‑94 (MQ=60)
GCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCA > SRR4302535.2598554/1‑94 (MQ=60)
CCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCAT > SRR4302535.1059499/1‑94 (MQ=60)
CAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATC < SRR4302535.3038433/94‑1 (MQ=60)
AAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCC > SRR4302535.1914708/1‑94 (MQ=60)
AAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCC < SRR4302535.3601996/94‑1 (MQ=60)
AAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCG < SRR4302535.3997773/94‑1 (MQ=60)
AAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCG > SRR4302535.4011020/1‑94 (MQ=60)
AAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCG < SRR4302535.2950943/94‑1 (MQ=60)
AGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGC < SRR4302535.2050221/94‑1 (MQ=60)
GTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCG < SRR4302535.3972335/94‑1 (MQ=60)
GCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAG < SRR4302535.595612/94‑1 (MQ=60)
GCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAG > SRR4302535.3508997/1‑94 (MQ=60)
TGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCT < SRR4302535.2438533/94‑1 (MQ=60)
TGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACAGAACCCCTGTTCCGCGTCATCCGCGAGCG > SRR4302535.1332042/1‑94 (MQ=60)
CTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAA > SRR4302535.3105047/1‑94 (MQ=60)
CTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAA > SRR4302535.2092711/1‑94 (MQ=60)
TTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATC < SRR4302535.4021698/94‑1 (MQ=60)
TTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATC < SRR4302535.2564835/94‑1 (MQ=60)
TGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCG < SRR4302535.188404/94‑1 (MQ=60)
TGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCG < SRR4302535.2631003/94‑1 (MQ=60)
TGAGGCGAAAATCATCATTATGGACGATCCGACTGCTGCGCTGACCAATACCGAAACCGAACCCCTATTCCGCGTCATCCGCGAGCTGAAATCG < SRR4302535.578718/94‑1 (MQ=53)
GAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGC < SRR4302535.3972248/94‑1 (MQ=60)
AGTCGAAAGTCATCATGATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGACCCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCA < SRR4302535.928318/94‑1 (MQ=60)
TCNANANTNATCATTATGGATGNACCGACCNATGCGCTGNCCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAG < SRR4302535.1047011/94‑1 (MQ=60)
TCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCCTCCGCGAGCTGAAATCGCAAG > SRR4302535.1795870/1‑94 (MQ=60)
TCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAG > SRR4302535.1641587/1‑94 (MQ=60)
TCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAG < SRR4302535.3351423/94‑1 (MQ=60)
TCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAG < SRR4302535.1509494/94‑1 (MQ=60)
CGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGG > SRR4302535.3794916/1‑94 (MQ=60)
GAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAACCCGACCCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGC < SRR4302535.2672664/94‑1 (MQ=60)
GAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCAGCGTCATCCGCGAGCTGAAATCGCAAGGC > SRR4302535.4264937/1‑94 (MQ=60)
AAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCC < SRR4302535.3655879/94‑1 (MQ=60)
AAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCC < SRR4302535.3869123/94‑1 (MQ=60)
AAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTAATCCGCGAGCTGAAATCGCAAGGCG > SRR4302535.856100/1‑94 (MQ=60)
AGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACTGAACCCCTGTTCCGCGTCATCCGCGCGCTGAAATCGCAAGGCCGC > SRR4302535.2172318/1‑94 (MQ=60)
GTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCG > SRR4302535.4199160/1‑94 (MQ=60)
GTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCG < SRR4302535.3004552/94‑1 (MQ=60)
GTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCG < SRR4302535.4480734/94‑1 (MQ=60)
GTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCG > SRR4302535.3695973/1‑94 (MQ=60)
CATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGCGCTGAAATCGCAAGGCCGCGGT > SRR4302535.4437864/1‑94 (MQ=60)
CATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGT > SRR4302535.307269/1‑94 (MQ=60)
CATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATACGCGAGCTGAAATCGCAAGGCCGCGGT > SRR4302535.3184963/1‑94 (MQ=60)
TCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTAT > SRR4302535.4307584/1‑94 (MQ=60)
CATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCCAGGCCGCGGTATT < SRR4302535.2548973/94‑1 (MQ=60)
CATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATT > SRR4302535.3899051/1‑94 (MQ=60)
CATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATT > SRR4302535.419872/1‑94 (MQ=60)
ATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTG > SRR4302535.586867/1‑94 (MQ=60)
TATTGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTC > SRR4302535.3906151/1‑94 (MQ=60)
TATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTC < SRR4302535.3222811/94‑1 (MQ=60)
TGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTA > SRR4302535.926410/1‑94 (MQ=60)
TGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAAACCCTGTTCAGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTTTCTA > SRR4302535.1856473/1‑94 (MQ=60)
GGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTAT < SRR4302535.548096/94‑1 (MQ=60)
GGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTAT < SRR4302535.694229/94‑1 (MQ=60)
GGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTAT < SRR4302535.2656204/94‑1 (MQ=60)
GGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTAT < SRR4302535.4232870/94‑1 (MQ=60)
ATGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATAT < SRR4302535.4073779/94‑1 (MQ=60)
TGAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATC > SRR4302535.715141/1‑94 (MQ=60)
GAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCT > SRR4302535.1619852/1‑94 (MQ=60)
GAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCT < SRR4302535.4440510/94‑1 (MQ=60)
GAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCT < SRR4302535.1024786/94‑1 (MQ=60)
GAACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCT < SRR4302535.3298452/94‑1 (MQ=60)
ACCGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCC > SRR4302535.2825662/1‑94 (MQ=60)
CGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCA > SRR4302535.2034180/1‑94 (MQ=60)
CGACCGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGCCCGCGGTATTGTCTATATCTCCCA > SRR4302535.3890032/1‑94 (MQ=60)
GACCGATGCACTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCAC < SRR4302535.4042478/94‑1 (MQ=60)
CGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGC > SRR4302535.1770726/1‑94 (MQ=60)
CGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGC > SRR4302535.1554128/1‑94 (MQ=60)
CGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGC > SRR4302535.2830193/1‑94 (MQ=60)
CGATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGC > SRR4302535.2756587/1‑94 (MQ=60)
ATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCAT < SRR4302535.4356033/94‑1 (MQ=60)
ATGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCAT > SRR4302535.1474434/1‑94 (MQ=60)
TGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATG < SRR4302535.4436893/94‑1 (MQ=60)
TGCGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATG < SRR4302535.4436892/94‑1 (MQ=60)
CGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAA < SRR4302535.3546619/94‑1 (MQ=60)
CGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAA > SRR4302535.755321/1‑94 (MQ=60)
CGCTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAA < SRR4302535.4393951/94‑1 (MQ=60)
CTGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAG > SRR4302535.2644787/1‑94 (MQ=60)
TGACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGA < SRR4302535.1800710/94‑1 (MQ=60)
CGACCGAGACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGA < SRR4302535.3161931/94‑1 (MQ=60)
GACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAA < SRR4302535.1880650/94‑1 (MQ=60)
GACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAA > SRR4302535.4162503/1‑94 (MQ=60)
GACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAA > SRR4302535.2151498/1‑94 (MQ=60)
GACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAA < SRR4302535.3034946/94‑1 (MQ=60)
ACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAA < SRR4302535.3668894/94‑1 (MQ=60)
ACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAA > SRR4302535.2563702/1‑94 (MQ=60)
ACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAA < SRR4302535.3668893/94‑1 (MQ=60)
ACCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATCACAGAAA > SRR4302535.3390224/1‑94 (MQ=60)
CCGATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAAT < SRR4302535.4545074/94‑1 (MQ=60)
GATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCT > SRR4302535.3562247/1‑94 (MQ=60)
GATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCT < SRR4302535.4116295/94‑1 (MQ=60)
GATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCT > SRR4302535.238110/1‑94 (MQ=60)
ATACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTT < SRR4302535.301759/94‑1 (MQ=60)
ATACCGAAACCGAACCCCTGTCCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTT < SRR4302535.1654390/94‑1 (MQ=60)
ACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCG > SRR4302535.2855591/1‑94 (MQ=60)
ACCGAAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCG > SRR4302535.4317545/1‑94 (MQ=60)
AAACCGAACCCCTGTTCCGCGTCATCGGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGAT < SRR4302535.2234740/94‑1 (MQ=60)
AAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGAT < SRR4302535.1765586/94‑1 (MQ=60)
AAACCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGAT < SRR4302535.4366479/94‑1 (MQ=60)
CCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTG < SRR4302535.4215847/94‑1 (MQ=60)
CCGAACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTG > SRR4302535.2555289/1‑94 (MQ=60)
AACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGT > SRR4302535.2514926/1‑94 (MQ=60)
ACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGAT > SRR4302535.52306/1‑94 (MQ=60)
ACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGAT < SRR4302535.1966902/94‑1 (MQ=60)
ACCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGAT > SRR4302535.2729467/1‑94 (MQ=60)
CCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGATG > SRR4302535.499164/1‑94 (MQ=60)
CCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGATG > SRR4302535.3483704/1‑94 (MQ=60)
CCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGATG < SRR4302535.3848910/94‑1 (MQ=60)
|
CAAATGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAATCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGATG > NC_000913/3931845‑3932031
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
