Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,934,276 |
C→T |
H125Y (CAC→TAC) |
rbsB → |
D‑ribose periplasmic binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,934,276 | 0 | C | T | 99.6%
| 880.3
/ ‑5.5
| 243 | H125Y (CAC→TAC) | rbsB | D‑ribose periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (120/122); total (120/123) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 |
Only 100 of 260 total aligned reads displayed.
GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG > NC_000913/3934186‑3934365
|
gCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCtac > 2:3269043/1‑93 (MQ=255)
gCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCtac < 2:2073761/93‑1 (MQ=255)
cAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCtaca < 2:3630729/93‑1 (MQ=255)
aGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAt < 1:850338/93‑1 (MQ=255)
gTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAtt < 1:110667/93‑1 (MQ=255)
gTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAtt < 1:1590322/93‑1 (MQ=255)
tGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTg > 2:743694/1‑93 (MQ=255)
tGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCACCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTg > 1:2547691/1‑93 (MQ=255)
gggTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGc < 1:3363834/93‑1 (MQ=255)
tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTc < 2:3781001/93‑1 (MQ=255)
tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTc < 1:1908482/93‑1 (MQ=255)
aaTGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCt > 1:4185464/1‑93 (MQ=255)
aTGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTg < 1:650174/93‑1 (MQ=255)
aTGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTg > 2:567256/1‑93 (MQ=255)
tGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGa < 2:4184752/93‑1 (MQ=255)
tGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGa > 2:1468103/1‑93 (MQ=255)
gCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGAt < 1:3222856/93‑1 (MQ=255)
cTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATa < 1:2730536/93‑1 (MQ=255)
tgtgAAGATGGCTAACCTGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATaa < 1:3768960/93‑1 (MQ=255)
tgtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATaa < 2:4608630/93‑1 (MQ=255)
tgtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATaa > 2:67/1‑93 (MQ=255)
tgtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATaa > 2:2481783/1‑93 (MQ=255)
gAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGt > 2:4039096/1‑93 (MQ=255)
gAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGt < 2:2036989/93‑1 (MQ=255)
aGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTAc > 2:3966668/1‑93 (MQ=255)
aaCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGggcggc > 2:2992545/1‑93 (MQ=255)
aaCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGggcggc > 2:436539/1‑93 (MQ=255)
aCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCa > 2:1243259/1‑93 (MQ=255)
aCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCa > 1:3038852/1‑93 (MQ=255)
aCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCa > 1:4594578/1‑93 (MQ=255)
ggCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAt < 1:2455929/93‑1 (MQ=255)
gCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATc > 1:3107299/1‑93 (MQ=255)
aaCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCt > 1:2378630/1‑93 (MQ=255)
aaCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCt < 1:696752/93‑1 (MQ=255)
aaCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCt < 1:4368965/93‑1 (MQ=255)
aCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTg < 2:1825115/93‑1 (MQ=255)
aCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTg > 2:1690802/1‑93 (MQ=255)
aCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTg > 2:3824499/1‑93 (MQ=255)
aCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTg > 2:4067927/1‑93 (MQ=255)
tCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGTGGCAAAATCGCTGGTg > 2:2869201/1‑93 (MQ=255)
tCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTg > 1:4111625/1‑93 (MQ=255)
cccGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGa < 2:1791526/93‑1 (MQ=255)
ccGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAt < 1:1230648/93‑1 (MQ=255)
ggTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTa > 1:3616528/1‑93 (MQ=255)
ggTTATCACTCTTGACCGCCAGGCAACGAAAGGTAAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTa < 2:268458/93‑1 (MQ=255)
gTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAc > 1:2598125/1‑93 (MQ=255)
ttATCACTCGTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACa < 1:1415625/93‑1 (MQ=255)
tATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAt < 1:4334291/93‑1 (MQ=255)
aTCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATc < 1:2232080/93‑1 (MQ=255)
aTCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATc < 2:3483621/93‑1 (MQ=255)
aCTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgcg > 2:3650460/1‑93 (MQ=255)
tctTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaa > 2:4424344/1‑93 (MQ=255)
tctTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaa > 2:3423768/1‑93 (MQ=255)
tGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaagaa < 1:776137/93‑1 (MQ=255)
gACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGaaa < 1:3957639/93‑1 (MQ=255)
cGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCg < 2:1283303/93‑1 (MQ=255)
cGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCg < 1:3325487/93‑1 (MQ=255)
gCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAACTCGCTGGTGATTACATCGCGAAGAAAGCgg > 1:1306977/1‑93 (MQ=255)
cAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCgggg > 1:2006066/1‑92 (MQ=255)
cAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGt < 2:1540784/93‑1 (MQ=255)
cAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGt < 1:291586/93‑1 (MQ=255)
aGGCAACTAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTg < 2:3864003/93‑1 (MQ=255)
aGGCAACGAAAGATGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTg < 1:815543/93‑1 (MQ=255)
gCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGaa > 1:944875/1‑93 (MQ=255)
gCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGaa < 1:2805688/93‑1 (MQ=255)
gCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGaa > 1:3148982/1‑93 (MQ=255)
cAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAg < 1:2971530/93‑1 (MQ=255)
aaCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAgg > 1:3406248/1‑93 (MQ=255)
aaCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAgg < 1:3918449/93‑1 (MQ=255)
aaCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAgg < 2:4229565/93‑1 (MQ=255)
aaCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAgg < 2:3406911/93‑1 (MQ=255)
aaCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAgg > 1:485932/1‑93 (MQ=255)
aCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAggg > 2:332564/1‑92 (MQ=255)
aCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGt > 1:3575979/1‑93 (MQ=255)
aCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGt > 1:470467/1‑93 (MQ=255)
aaaGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGcc > 1:4521813/1‑93 (MQ=255)
aaGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCa < 1:2844737/93‑1 (MQ=255)
aGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGCGCCaa > 2:3198541/1‑93 (MQ=255)
ggTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaaa < 2:2792751/93‑1 (MQ=255)
ggTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaaa < 2:3098658/93‑1 (MQ=255)
gTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAg > 2:1054986/1‑93 (MQ=255)
gAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGtt < 2:2336794/93‑1 (MQ=255)
gAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGtt > 1:1831939/1‑93 (MQ=255)
gAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGtt > 1:4059762/1‑93 (MQ=255)
gAAGTGGTGAGCTACATTGCTTCTGATAACGGACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGAGAAGGTGCCAAAggt > 2:528210/1‑91 (MQ=255)
aaGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGATGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTa < 2:704879/93‑1 (MQ=255)
aGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAt < 1:2708356/93‑1 (MQ=255)
aGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAt < 1:3846665/93‑1 (MQ=255)
gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc < 2:952011/93‑1 (MQ=255)
gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc < 2:2669827/93‑1 (MQ=255)
gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc > 1:169407/1‑93 (MQ=255)
ggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGa > 1:424462/1‑93 (MQ=255)
ggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGa < 2:796426/93‑1 (MQ=255)
ggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGa < 1:1128343/93‑1 (MQ=255)
ggggAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGa < 2:1131763/90‑1 (MQ=255)
tgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGc > 2:239541/1‑93 (MQ=255)
tgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGc > 2:1072006/1‑93 (MQ=255)
tgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGc < 1:2658929/93‑1 (MQ=255)
tgAGCGACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGc < 2:3061468/93‑1 (MQ=255)
aGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTg > 1:3191254/1‑93 (MQ=255)
|
GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG > NC_000913/3934186‑3934365
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCA > NC_000913/3934183‑3934367
|
GACGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCT > SRR4302535.218241/1‑94 (MQ=60)
CGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTAC > SRR4302535.3971214/1‑94 (MQ=60)
CGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTAC > SRR4302535.3823563/1‑94 (MQ=60)
CAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAT > SRR4302535.700240/1‑94 (MQ=60)
CAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAT < SRR4302535.3514532/94‑1 (MQ=60)
AGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATT < SRR4302535.856325/94‑1 (MQ=60)
GTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTG < SRR4302535.111447/94‑1 (MQ=60)
GTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTG < SRR4302535.1601797/94‑1 (MQ=60)
GTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCACCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTG > SRR4302535.2566022/1‑94 (MQ=60)
GGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCT < SRR4302535.1807661/94‑1 (MQ=60)
GGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCT < SRR4302535.3387241/94‑1 (MQ=60)
GGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCT > SRR4302535.3930067/1‑94 (MQ=60)
GTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTC > SRR4302535.4058102/1‑94 (MQ=60)
TAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCT > SRR4302535.4214096/1‑94 (MQ=60)
TAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCT < SRR4302535.4352673/94‑1 (MQ=60)
TAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCT < SRR4302535.1922240/94‑1 (MQ=60)
AATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTG < SRR4302535.4698818/94‑1 (MQ=60)
AATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTG < SRR4302535.1899835/94‑1 (MQ=60)
AATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTG < SRR4302535.975998/94‑1 (MQ=60)
ATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGA > SRR4302535.3294748/1‑94 (MQ=60)
ATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGA < SRR4302535.654710/94‑1 (MQ=60)
GCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATA < SRR4302535.3245194/94‑1 (MQ=60)
GCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATA < SRR4302535.1133085/94‑1 (MQ=60)
CTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAA < SRR4302535.2750026/94‑1 (MQ=60)
CTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAA > SRR4302535.4249655/1‑94 (MQ=60)
TGTGAAGATGGCTAACCTGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAAC < SRR4302535.3794974/94‑1 (MQ=60)
TGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAAC < SRR4302535.2978008/94‑1 (MQ=60)
GTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACG > SRR4302535.1661204/1‑94 (MQ=60)
GTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACG < SRR4302535.1982155/94‑1 (MQ=60)
GTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACG < SRR4302535.2635832/94‑1 (MQ=60)
GATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTG < SRR4302535.342339/94‑1 (MQ=60)
ATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGG < SRR4302535.2404036/94‑1 (MQ=60)
GCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCG > SRR4302535.2536136/1‑94 (MQ=60)
TAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGC < SRR4302535.1198880/94‑1 (MQ=60)
AACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCA > SRR4302535.3154323/1‑94 (MQ=60)
AACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCA > SRR4302535.3060135/1‑94 (MQ=60)
AACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCA > SRR4302535.4625844/1‑94 (MQ=60)
AACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCA < SRR4302535.1203612/94‑1 (MQ=60)
AACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCA < SRR4302535.363730/94‑1 (MQ=60)
ACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAA < SRR4302535.2831625/94‑1 (MQ=60)
AGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAT > SRR4302535.756455/1‑94 (MQ=60)
GGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATC < SRR4302535.2473634/94‑1 (MQ=60)
GGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATC > SRR4302535.3128933/1‑94 (MQ=60)
GGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATC < SRR4302535.3004490/94‑1 (MQ=60)
GCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCG > SRR4302535.129011/1‑94 (MQ=60)
CGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGC < SRR4302535.3010825/94‑1 (MQ=60)
GAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCT > SRR4302535.2395710/1‑94 (MQ=60)
GAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCT > SRR4302535.3383919/1‑94 (MQ=60)
AACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTG < SRR4302535.4398866/94‑1 (MQ=60)
AACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTG < SRR4302535.701638/94‑1 (MQ=60)
ACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGG < SRR4302535.273936/94‑1 (MQ=60)
ACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGG < SRR4302535.488680/94‑1 (MQ=60)
ATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTG > SRR4302535.92566/1‑94 (MQ=60)
ATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTG > SRR4302535.4139768/1‑94 (MQ=60)
CCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAACTCGCTGGTGAT > SRR4302535.4470364/1‑94 (MQ=60)
CCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAT > SRR4302535.2585605/1‑94 (MQ=60)
CCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATT < SRR4302535.1239446/94‑1 (MQ=60)
CGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTA > SRR4302535.3641600/1‑94 (MQ=60)
GGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAC > SRR4302535.2932711/1‑94 (MQ=60)
GGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAC > SRR4302535.2616785/1‑94 (MQ=60)
TTATCACTCGTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAT < SRR4302535.1425731/94‑1 (MQ=60)
TATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATC < SRR4302535.4363934/94‑1 (MQ=60)
TATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATC > SRR4302535.1368111/1‑94 (MQ=60)
TATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATC > SRR4302535.1754752/1‑94 (MQ=60)
TATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATC > SRR4302535.793275/1‑94 (MQ=60)
ATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG < SRR4302535.2247952/94‑1 (MQ=60)
ATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG < SRR4302535.834897/94‑1 (MQ=60)
ATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG < SRR4302535.1539710/94‑1 (MQ=60)
ATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG < SRR4302535.258401/94‑1 (MQ=60)
TCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGC > SRR4302535.843836/1‑94 (MQ=60)
TCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGAGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGC > SRR4302535.3715785/1‑94 (MQ=60)
ACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGA > SRR4302535.4206109/1‑94 (MQ=60)
TCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAG < SRR4302535.4375041/94‑1 (MQ=60)
TTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAA < SRR4302535.3173835/94‑1 (MQ=60)
TGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAA < SRR4302535.781593/94‑1 (MQ=60)
GACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAG < SRR4302535.3984661/94‑1 (MQ=60)
GACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAG < SRR4302535.459270/94‑1 (MQ=60)
GACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAG < SRR4302535.3081246/94‑1 (MQ=60)
ACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGC > SRR4302535.2059068/1‑94 (MQ=60)
CGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAACTCGCTGGTGATTACATCGCGAAGAAAGCGG > SRR4302535.1316311/1‑94 (MQ=60)
CGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGG < SRR4302535.3348628/94‑1 (MQ=60)
CGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGG < SRR4302535.1509102/94‑1 (MQ=60)
CGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATCGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGG < SRR4302535.3233859/94‑1 (MQ=60)
GCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGG < SRR4302535.4506586/94‑1 (MQ=60)
CCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGTCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGT < SRR4302535.4290515/94‑1 (MQ=60)
CCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGG > SRR4302535.3348063/1‑94 (MQ=60)
CCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGG > SRR4302535.2020517/1‑94 (MQ=60)
CAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTG < SRR4302535.3718445/94‑1 (MQ=60)
CAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTG < SRR4302535.293627/94‑1 (MQ=60)
AGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGA > SRR4302535.2631829/1‑94 (MQ=60)
AGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGA > SRR4302535.2236488/1‑94 (MQ=60)
AGGCAACGAAAGATGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGA < SRR4302535.821261/94‑1 (MQ=60)
GGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAA > SRR4302535.3556872/1‑94 (MQ=60)
GGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAA > SRR4302535.951566/1‑94 (MQ=60)
GGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAA > SRR4302535.3170874/1‑94 (MQ=60)
GCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAG < SRR4302535.2825636/94‑1 (MQ=60)
GCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAG < SRR4302535.533945/94‑1 (MQ=60)
GCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAG < SRR4302535.4110471/94‑1 (MQ=60)
CAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGG < SRR4302535.2015415/94‑1 (MQ=60)
CAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGG > SRR4302535.3429955/1‑94 (MQ=60)
CAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGG < SRR4302535.2889023/94‑1 (MQ=60)
CAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGG > SRR4302535.489339/1‑94 (MQ=60)
CAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGG < SRR4302535.2992388/94‑1 (MQ=60)
CAACGAAAGGTGAAGTAGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGG < SRR4302535.324219/94‑1 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT > SRR4302535.473758/1‑94 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT > SRR4302535.3931841/1‑94 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT > SRR4302535.3974312/1‑94 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT < SRR4302535.3945253/94‑1 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT < SRR4302535.2774913/94‑1 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT > SRR4302535.3600770/1‑94 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT < SRR4302535.3180331/94‑1 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGG > SRR4302535.473760/1‑94 (MQ=60)
ACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTG < SRR4302535.68369/94‑1 (MQ=60)
CGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGC < SRR4302535.3392004/94‑1 (MQ=60)
GAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCC > SRR4302535.4552801/1‑94 (MQ=60)
AAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAA < SRR4302535.82045/94‑1 (MQ=60)
AAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAA < SRR4302535.2864904/94‑1 (MQ=60)
AAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAA > SRR4302535.4659136/1‑94 (MQ=60)
GGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAG > SRR4302535.3149753/1‑94 (MQ=60)
TGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTT > SRR4302535.1845156/1‑94 (MQ=60)
TGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTT > SRR4302535.4093573/1‑94 (MQ=60)
TGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTT > SRR4302535.4087549/1‑94 (MQ=60)
AAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAT < SRR4302535.2335478/94‑1 (MQ=60)
AGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATC < SRR4302535.423826/94‑1 (MQ=60)
AGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATC > SRR4302535.170585/1‑94 (MQ=60)
AGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATC < SRR4302535.3873147/94‑1 (MQ=60)
AGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATC > SRR4302535.2850019/1‑94 (MQ=60)
AGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATC < SRR4302535.2727709/94‑1 (MQ=60)
AGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATC < SRR4302535.2727708/94‑1 (MQ=60)
GTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCG < SRR4302535.2711975/94‑1 (MQ=60)
TGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGA > SRR4302535.427423/1‑94 (MQ=60)
GGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAG < SRR4302535.1136398/94‑1 (MQ=60)
TGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCT > SRR4302535.1326183/1‑94 (MQ=60)
TGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCT < SRR4302535.2677979/94‑1 (MQ=60)
TGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCT < SRR4302535.2408030/94‑1 (MQ=60)
GAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG > SRR4302535.3213329/1‑94 (MQ=60)
AGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGC > SRR4302535.4655963/1‑94 (MQ=60)
AGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGC > SRR4302535.3360756/1‑94 (MQ=60)
AGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGC > SRR4302535.132296/1‑94 (MQ=60)
GCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCA > SRR4302535.1019/1‑94 (MQ=60)
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GACGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCA > NC_000913/3934183‑3934367
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
