Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,973,216 |
C→T |
A153A (GCC→GCT) |
wecE → |
putative regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,973,216 | 0 | C | T | 100.0%
| 822.3
/ NA
| 223 | A153A (GCC→GCT) | wecE | putative regulator |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (119/104); total (119/104) |
Only 100 of 233 total aligned reads displayed.
GTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTA > NC_000913/3973127‑3973305
|
tGCCGTGCCATTACGCGGGTGTGGCTTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTc < 1:2651894/93‑1 (MQ=255)
gCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCa < 1:2999010/93‑1 (MQ=255)
gCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCa < 1:2300177/93‑1 (MQ=255)
cGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAgg < 2:1670926/93‑1 (MQ=255)
cGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAgg < 2:2953029/93‑1 (MQ=255)
cGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAgg < 1:2838057/93‑1 (MQ=255)
ggTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAggg > 1:1007434/1‑93 (MQ=255)
ggTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAggg < 2:592412/93‑1 (MQ=255)
gTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGc < 2:1141386/93‑1 (MQ=255)
aTTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGa < 1:2046777/93‑1 (MQ=255)
ttACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAt < 1:3405101/93‑1 (MQ=255)
ttACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAt > 1:1626444/1‑93 (MQ=255)
ttACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAt < 1:1929048/93‑1 (MQ=255)
aCGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGt < 2:1283299/93‑1 (MQ=255)
cgGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGCTGCTGCTCAGGGCGTGATGTccc > 2:1823696/1‑92 (MQ=255)
gggTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCAc < 2:193076/93‑1 (MQ=255)
gggTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAAGTCCAc > 2:2435544/1‑93 (MQ=255)
gtgtGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACtt < 2:3026333/93‑1 (MQ=255)
tgtgGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTa < 2:1724808/93‑1 (MQ=255)
tgtgGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTa > 2:3817515/1‑93 (MQ=255)
gtgGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTAc < 2:3677733/93‑1 (MQ=255)
ggCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACaa < 2:4441573/93‑1 (MQ=255)
gCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACaaa < 2:4673440/93‑1 (MQ=255)
gCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACaaa > 2:836949/1‑93 (MQ=255)
gCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACaaa < 1:1222932/93‑1 (MQ=255)
cTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAgg < 1:3571014/93‑1 (MQ=255)
cTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAgg < 1:890182/93‑1 (MQ=255)
tGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAggg < 1:1979653/93‑1 (MQ=255)
tGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAggg > 2:1643925/1‑93 (MQ=255)
tGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAggg < 2:1088985/93‑1 (MQ=255)
cGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCg < 1:3236333/93‑1 (MQ=255)
gAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCgg > 1:2418046/1‑92 (MQ=255)
aaTGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGc > 2:312421/1‑93 (MQ=255)
aaTGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGc > 1:2152640/1‑93 (MQ=255)
aTGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGCTGTCCACTTACAAAGGGCGTGCa > 2:2030493/1‑93 (MQ=255)
aTGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCa < 2:1109584/93‑1 (MQ=255)
aTGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCa < 1:685209/93‑1 (MQ=255)
tGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAc < 1:2405353/93‑1 (MQ=255)
gACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTg > 2:148050/1‑93 (MQ=255)
gACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTg < 1:42733/93‑1 (MQ=255)
gACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTg > 2:4071990/1‑93 (MQ=255)
ccATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGaa < 2:2131397/93‑1 (MQ=255)
ccATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGaa > 2:362198/1‑93 (MQ=255)
ccATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGaa > 2:508849/1‑93 (MQ=255)
cATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAAc > 2:1009841/1‑93 (MQ=255)
cATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAAc > 1:1082809/1‑93 (MQ=255)
aTTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAAcc > 1:4637489/1‑93 (MQ=255)
aTTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAAcc > 1:4002273/1‑93 (MQ=255)
aTTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAAcc > 1:2695242/1‑93 (MQ=255)
ttATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCa < 2:1748844/93‑1 (MQ=255)
atATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAAGCa < 2:1499512/92‑1 (MQ=255)
tGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTg < 1:1660108/93‑1 (MQ=255)
gTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCa < 2:574301/93‑1 (MQ=255)
ttGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCat > 2:2648125/1‑93 (MQ=255)
ggCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCatat < 1:1071729/93‑1 (MQ=255)
ggCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCatat < 2:1261912/93‑1 (MQ=255)
gCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATAtt < 1:4462762/93‑1 (MQ=255)
cGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTg < 1:3435589/93‑1 (MQ=255)
gAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTgg > 1:610157/1‑93 (MQ=255)
aaaaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgc > 2:533733/1‑93 (MQ=255)
aaaaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgc < 2:2067948/93‑1 (MQ=255)
aaaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgct < 2:4052638/93‑1 (MQ=255)
aaaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgct > 2:2190608/1‑93 (MQ=255)
aaaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgct > 2:2285368/1‑93 (MQ=255)
aaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgctg < 1:2902561/93‑1 (MQ=255)
aaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgctg > 2:2467702/1‑93 (MQ=255)
aaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGGCATATTGgctg > 1:3707046/1‑93 (MQ=255)
aaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgctgc > 2:1385112/1‑93 (MQ=255)
gCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCtt > 2:3872211/1‑93 (MQ=255)
gCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCtt > 1:412785/1‑93 (MQ=255)
gCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACAGGGAACCATTGGTCATATTGGCTGCtt < 2:3211452/93‑1 (MQ=255)
cATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCttt > 1:3632877/1‑93 (MQ=255)
cATAATTTGTTTGTGGGAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCttt > 2:1435290/1‑93 (MQ=255)
tAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAg > 1:1838079/1‑93 (MQ=255)
aaTTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGc < 2:3699076/93‑1 (MQ=255)
aTTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCt > 1:1763357/1‑93 (MQ=255)
tgtttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTcc > 2:4474765/1‑93 (MQ=255)
tgtttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTcc < 1:2530081/93‑1 (MQ=255)
gtttgtGGTAGAAGATGCTGCTCAGGGCGTGGTGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCa > 2:2918495/1‑93 (MQ=255)
gtttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCa > 2:3800094/1‑93 (MQ=255)
tttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCAt > 1:1253618/1‑93 (MQ=255)
tttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCAt < 2:1549565/93‑1 (MQ=255)
tgGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGaaa > 1:155007/1‑93 (MQ=255)
tgGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGaaa > 2:709686/1‑93 (MQ=255)
ggTAGAAGTTGTGGCTAAGGGCGTGATGTCCACTTACAAGGGGCGTGCGCT‑GGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAAcc < 1:3081199/93‑1 (MQ=255)
ggTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGGTTCCATTAAAc > 1:35492/1‑93 (MQ=255)
ggTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAAc < 1:91566/93‑1 (MQ=255)
ggTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAAc < 2:856602/93‑1 (MQ=255)
ggTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAAc < 2:3385730/93‑1 (MQ=255)
tAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGGTTTAGCTTCCATGAAACCa > 1:403777/1‑93 (MQ=255)
gaagaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTCGCTTCCATGAAACCaaa > 1:813971/1‑93 (MQ=255)
gaagaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCaaa > 1:4421752/1‑93 (MQ=255)
aagaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCaaaa < 1:2092158/93‑1 (MQ=255)
agaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCaaaaa > 2:4124174/1‑93 (MQ=255)
ggtgctgcTCAGCGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAc < 2:4528094/91‑1 (MQ=255)
gaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAc > 1:4599179/1‑93 (MQ=255)
gaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAc > 1:1451047/1‑93 (MQ=255)
gaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAc > 2:796825/1‑93 (MQ=255)
gaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAc < 1:3678630/93‑1 (MQ=255)
tgctgcTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTa > 1:752100/1‑93 (MQ=255)
|
GTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTA > NC_000913/3973127‑3973305
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACG > NC_000913/3973123‑3973309
|
TATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCT < SRR4302535.973223/94‑1 (MQ=60)
TATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCT < SRR4302535.719459/94‑1 (MQ=60)
TATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCT < SRR4302535.1570933/94‑1 (MQ=60)
ATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTG < SRR4302535.274765/94‑1 (MQ=60)
GTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTC < SRR4302535.3671759/94‑1 (MQ=60)
TGCCGTGCCATTACGCGGGTGTGGCTTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCA < SRR4302535.2670891/94‑1 (MQ=60)
GCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAG < SRR4302535.3020036/94‑1 (MQ=60)
GCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAG < SRR4302535.736447/94‑1 (MQ=60)
GCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAG < SRR4302535.2316638/94‑1 (MQ=60)
CCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGG < SRR4302535.3095611/94‑1 (MQ=60)
CCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGG < SRR4302535.4424013/94‑1 (MQ=60)
CGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGG > SRR4302535.1014592/1‑94 (MQ=60)
CGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGG < SRR4302535.2858192/94‑1 (MQ=60)
GGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGC > SRR4302535.76245/1‑94 (MQ=60)
CATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGA > SRR4302535.2046776/1‑94 (MQ=60)
ATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAT < SRR4302535.2061515/94‑1 (MQ=60)
ATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAT > SRR4302535.233243/1‑94 (MQ=60)
ATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAT > SRR4302535.1638186/1‑94 (MQ=60)
TTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATG < SRR4302535.1942952/94‑1 (MQ=60)
TTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATG < SRR4302535.3783129/94‑1 (MQ=60)
TTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATG < SRR4302535.3428796/94‑1 (MQ=60)
TACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGT > SRR4302535.1701880/1‑94 (MQ=60)
CGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCC < SRR4302535.1082616/94‑1 (MQ=60)
GGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACT > SRR4302535.833749/1‑94 (MQ=60)
GGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTT < SRR4302535.420527/94‑1 (MQ=60)
TGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTAC > SRR4302535.2085713/1‑94 (MQ=60)
GGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAA < SRR4302535.939687/94‑1 (MQ=60)
GCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAG < SRR4302535.1231684/94‑1 (MQ=60)
GCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAG < SRR4302535.1588360/94‑1 (MQ=60)
CTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGG < SRR4302535.3177580/94‑1 (MQ=60)
CTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGG > SRR4302535.4542882/1‑94 (MQ=60)
CTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGG < SRR4302535.3595778/94‑1 (MQ=60)
CTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGG < SRR4302535.896490/94‑1 (MQ=60)
TGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGC < SRR4302535.1993907/94‑1 (MQ=60)
TGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGC < SRR4302535.227976/94‑1 (MQ=60)
TGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGC > SRR4302535.3641383/1‑94 (MQ=60)
CGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGT < SRR4302535.3258799/94‑1 (MQ=60)
CGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGT > SRR4302535.1237949/1‑94 (MQ=60)
CGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGG > SRR4302535.2435452/1‑94 (MQ=60)
GAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTG > SRR4302535.3467451/1‑94 (MQ=60)
AAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGC > SRR4302535.2168114/1‑94 (MQ=60)
AAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGC > SRR4302535.4657466/1‑94 (MQ=60)
ATGGACACCATTATGTCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATTCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAC < SRR4302535.2741183/94‑1 (MQ=60)
ATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAC < SRR4302535.690012/94‑1 (MQ=60)
TGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACT < SRR4302535.2422665/94‑1 (MQ=60)
TGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACT > SRR4302535.1202282/1‑94 (MQ=60)
GGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTG > SRR4302535.3725507/1‑94 (MQ=60)
GACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGG < SRR4302535.43057/94‑1 (MQ=60)
CACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGA > SRR4302535.2246346/1‑94 (MQ=60)
CCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAAC > SRR4302535.1090506/1‑94 (MQ=60)
CATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACC > SRR4302535.4029652/1‑94 (MQ=60)
CATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACC > SRR4302535.4668944/1‑94 (MQ=60)
CATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACC > SRR4302535.2714507/1‑94 (MQ=60)
ATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCA < SRR4302535.2431064/94‑1 (MQ=60)
ATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCA > SRR4302535.1665507/1‑94 (MQ=60)
ATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTG > SRR4302535.4476426/1‑94 (MQ=60)
ATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGACGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTG > SRR4302535.899573/1‑94 (MQ=60)
TGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGG < SRR4302535.1672106/94‑1 (MQ=60)
GGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGT > SRR4302535.3274607/1‑94 (MQ=60)
GCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTC < SRR4302535.4100164/94‑1 (MQ=60)
CGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCA < SRR4302535.153954/94‑1 (MQ=60)
CGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCA > SRR4302535.3452445/1‑94 (MQ=60)
TTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATA < SRR4302535.2871642/94‑1 (MQ=60)
TGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATAT < SRR4302535.669578/94‑1 (MQ=60)
TGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATAT < SRR4302535.4270566/94‑1 (MQ=60)
GGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATT < SRR4302535.1079343/94‑1 (MQ=60)
GCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTG < SRR4302535.4493369/94‑1 (MQ=60)
CGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTTG > SRR4302535.2486136/1‑94 (MQ=60)
CGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGG > SRR4302535.614408/1‑94 (MQ=60)
CGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGG < SRR4302535.3459465/94‑1 (MQ=60)
CGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATGGGTCATATTGG > SRR4302535.1062348/1‑94 (MQ=60)
GAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGC > SRR4302535.2622412/1‑94 (MQ=60)
GAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGC < SRR4302535.4045085/94‑1 (MQ=60)
AAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCT > SRR4302535.2006406/1‑94 (MQ=60)
AAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTG > SRR4302535.1236113/1‑94 (MQ=60)
AAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGGCATATTGGCTG > SRR4302535.3732713/1‑94 (MQ=60)
AAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGC > SRR4302535.181543/1‑94 (MQ=60)
AAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGC < SRR4302535.2923078/94‑1 (MQ=60)
AGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTT > SRR4302535.415685/1‑94 (MQ=60)
AGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTT < SRR4302535.267812/94‑1 (MQ=60)
GCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTT > SRR4302535.3658054/1‑94 (MQ=60)
CATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTT < SRR4302535.30757/94‑1 (MQ=60)
CATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTA < SRR4302535.1622087/94‑1 (MQ=60)
ATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAG < SRR4302535.3835253/94‑1 (MQ=60)
ATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAG > SRR4302535.1851338/1‑94 (MQ=60)
ATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAG > SRR4302535.1809736/1‑94 (MQ=60)
AATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCT < SRR4302535.1956729/94‑1 (MQ=60)
AATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCT > SRR4302535.2797081/1‑94 (MQ=60)
AATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCT > SRR4302535.1776130/1‑94 (MQ=60)
ATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTT > SRR4302535.681766/1‑94 (MQ=60)
ATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTT < SRR4302535.3637265/94‑1 (MQ=60)
ATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTT > SRR4302535.4610919/1‑94 (MQ=60)
ATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTT > SRR4302535.212904/1‑94 (MQ=60)
TGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCA < SRR4302535.2548311/94‑1 (MQ=60)
GTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCAT > SRR4302535.1262582/1‑94 (MQ=60)
GTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCAT > SRR4302535.1381335/1‑94 (MQ=60)
TGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAA > SRR4302535.3593582/1‑94 (MQ=60)
GTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAA < SRR4302535.2464274/94‑1 (MQ=60)
GTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAA > SRR4302535.156097/1‑94 (MQ=60)
TGGTAGAGTATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAAC < SRR4302535.2949546/94‑1 (MQ=60)
TGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGGTTCCATTAAAC > SRR4302535.35767/1‑94 (MQ=60)
GGTAGAAGTTGTGGCTAAGGGCGTGATGTCCACTTACAAGGGGCGTGCGCT‑GGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCA < SRR4302535.3102678/94‑1 (MQ=60)
GGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACC < SRR4302535.479069/94‑1 (MQ=60)
GGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACC < SRR4302535.92213/94‑1 (MQ=60)
GTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGGTTTAGCTTCCATGAAACCA > SRR4302535.406605/1‑94 (MQ=60)
GTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCA > SRR4302535.855659/1‑94 (MQ=60)
GTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCA > SRR4302535.3446845/1‑94 (MQ=60)
AGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTCGCTTCCATGAAACCAAA > SRR4302535.819681/1‑94 (MQ=60)
AGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAA > SRR4302535.4452033/1‑94 (MQ=60)
AAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAA > SRR4302535.190880/1‑94 (MQ=60)
AAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAA < SRR4302535.2107232/94‑1 (MQ=60)
AGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAC > SRR4302535.1461427/1‑94 (MQ=60)
AGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAC > SRR4302535.4630465/1‑94 (MQ=60)
GATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACT < SRR4302535.3704091/94‑1 (MQ=60)
ATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTA > SRR4302535.757394/1‑94 (MQ=60)
GCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACA < SRR4302535.4451674/94‑1 (MQ=60)
GCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACA > SRR4302535.2776052/1‑94 (MQ=60)
GCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACA < SRR4302535.1978292/94‑1 (MQ=60)
TGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACG < SRR4302535.3882493/94‑1 (MQ=60)
TGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACG > SRR4302535.2409766/1‑94 (MQ=60)
TGCTCAGGGCATGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACG < SRR4302535.665389/94‑1 (MQ=60)
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TATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACG > NC_000913/3973123‑3973309
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
