Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,985,741 |
T→C |
V313V (GTA→GTG) |
hemX ← |
uroporphyrinogen III methylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,985,741 | 0 | T | C | 100.0%
| 690.2
/ NA
| 222 | V313V (GTA→GTG) | hemX | uroporphyrinogen III methylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (110/112); total (110/112) |
Only 100 of 234 total aligned reads displayed.
AAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGC > NC_000913/3985651‑3985829
|
aaGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAgcacgcac > 2:2137027/1‑93 (MQ=255)
aGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCAcc > 1:4563198/1‑93 (MQ=255)
gATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCAccc > 2:408176/1‑93 (MQ=255)
ccATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAgg < 1:3162181/93‑1 (MQ=255)
cATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGt < 2:4345470/93‑1 (MQ=255)
cATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGt < 1:679713/93‑1 (MQ=255)
cGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGga < 1:3462859/93‑1 (MQ=255)
cGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGga < 2:1012832/93‑1 (MQ=255)
agaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGgaga > 1:2824111/1‑93 (MQ=255)
agaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGgaga > 2:3230430/1‑93 (MQ=255)
agaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGgaga > 1:569193/1‑93 (MQ=255)
gaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAc > 1:1084162/1‑93 (MQ=255)
gaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAc > 1:3237851/1‑93 (MQ=255)
gaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAc < 2:2387165/93‑1 (MQ=255)
gaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAc > 1:1426890/1‑93 (MQ=255)
gaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAc < 1:1229591/93‑1 (MQ=255)
atatTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACg > 1:1847037/1‑93 (MQ=255)
tatTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGt > 2:1479769/1‑93 (MQ=255)
tatTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGt < 1:3879338/93‑1 (MQ=255)
ttttGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTtc < 2:1346046/93‑1 (MQ=255)
ttttGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTtc < 1:3738907/93‑1 (MQ=255)
ttttGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTtc > 2:4286464/1‑93 (MQ=255)
tttGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTtct < 1:2745462/93‑1 (MQ=255)
tGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTcc < 2:246257/93‑1 (MQ=255)
tGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTcc < 1:966753/93‑1 (MQ=255)
cTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGGTCTCCAg > 2:1717656/1‑93 (MQ=255)
tGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAgc > 1:2423317/1‑93 (MQ=255)
tGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAgc < 2:2853240/93‑1 (MQ=255)
ggCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAgcg > 2:2613519/1‑93 (MQ=255)
ggCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGGGGAGACGTTCTCCAgcg > 2:4461049/1‑93 (MQ=255)
cTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGcc < 2:100089/93‑1 (MQ=255)
cTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGcc < 1:2779546/93‑1 (MQ=255)
ttAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCt < 2:3604381/93‑1 (MQ=255)
ttAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCt > 1:4183468/1‑93 (MQ=255)
ttAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCt > 1:4316488/1‑93 (MQ=255)
ttAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCt > 1:2038242/1‑93 (MQ=255)
aCTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGc < 2:594146/93‑1 (MQ=255)
cTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCg > 2:1645982/1‑93 (MQ=255)
ggTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGAt < 2:1400518/93‑1 (MQ=255)
ggTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGAt > 2:1250104/1‑93 (MQ=255)
gTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATa < 2:2899906/93‑1 (MQ=255)
gTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATa > 2:4128234/1‑93 (MQ=255)
cccTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtc < 1:1635152/92‑1 (MQ=255)
aCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtc > 2:813560/1‑93 (MQ=255)
aCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtc > 2:912061/1‑93 (MQ=255)
ccTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtct > 1:1160731/1‑93 (MQ=255)
cTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtctc < 2:4234237/93‑1 (MQ=255)
cTCGTCGAGGAACGCTTTGGTGCTGGCATCATCAGTATCGTAGTAAGCGCGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtctc < 2:4599086/93‑1 (MQ=255)
tcgtcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTctct > 2:521029/1‑93 (MQ=255)
tcgtcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTctct > 2:1147639/1‑93 (MQ=255)
tcgtcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTctct < 1:1314162/93‑1 (MQ=255)
cgtcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCtt > 1:4192154/1‑93 (MQ=255)
tcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTcc < 1:2267905/93‑1 (MQ=255)
tcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTcc < 2:298453/93‑1 (MQ=255)
tcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTcc < 2:669417/93‑1 (MQ=255)
gAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTg < 2:3741581/93‑1 (MQ=255)
gAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTg < 2:1844453/93‑1 (MQ=255)
ggAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGt > 2:2789238/1‑93 (MQ=255)
ggAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGt < 2:3033130/93‑1 (MQ=255)
gAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTg > 2:1438547/1‑93 (MQ=255)
aaCGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGa < 1:4454896/93‑1 (MQ=255)
aCGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAc > 2:3676957/1‑93 (MQ=255)
aCGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAc > 1:3378651/1‑93 (MQ=255)
aCGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAc > 1:3076506/1‑93 (MQ=255)
gCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGACACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAcgc < 1:2508210/93‑1 (MQ=255)
gCTTTGGTGGTGCCATCATCAGCATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCCCCTGGCGATAAGTCTCTTCCTGGTGAcgc < 1:2705829/93‑1 (MQ=255)
tttGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCgg > 1:101293/1‑93 (MQ=255)
tggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCtt < 1:4396187/93‑1 (MQ=255)
tggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCtt < 2:4310530/93‑1 (MQ=255)
tggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCtt < 2:1108053/93‑1 (MQ=255)
ggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtg < 1:4504494/93‑1 (MQ=255)
ggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtg > 1:581051/1‑93 (MQ=255)
ggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCACCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtg < 1:3297763/93‑1 (MQ=255)
gCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtgt < 2:2715064/93‑1 (MQ=255)
gCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtgt > 2:3079258/1‑93 (MQ=255)
tcatcaGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGtgct > 2:3319291/1‑93 (MQ=255)
atcaGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGtgctgc < 2:1997972/93‑1 (MQ=255)
aGTATCGTAGTAAGCACGCCCCCAGGTGGATACGGTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGAc < 1:2935832/93‑1 (MQ=255)
aGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGAc > 1:297738/1‑93 (MQ=255)
tATCGTAGTAAGCATGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACca < 1:1563060/93‑1 (MQ=255)
gaTCGGAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACca < 1:196538/92‑1 (MQ=255)
aTCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcag > 1:800842/1‑93 (MQ=255)
aTCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcag < 1:2002471/93‑1 (MQ=255)
tCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagc > 1:1921347/1‑93 (MQ=255)
cgaggtaAGCACGCTCCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagca < 2:3943184/89‑1 (MQ=255)
cGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagca < 2:2770977/93‑1 (MQ=255)
cGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagca < 2:1066402/93‑1 (MQ=255)
gtagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagcag < 1:1950324/93‑1 (MQ=255)
gtagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagcag > 1:2855576/1‑93 (MQ=255)
tagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAgg > 2:4384993/1‑93 (MQ=255)
tagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAgg < 1:903121/93‑1 (MQ=255)
gtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCg > 1:4132728/1‑93 (MQ=255)
taAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCga < 1:4036957/93‑1 (MQ=255)
taAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCga < 2:2210127/93‑1 (MQ=255)
aaGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCgag > 1:4603606/1‑93 (MQ=255)
aGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCgaga < 2:1339390/93‑1 (MQ=255)
aGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCgaga > 2:2363384/1‑93 (MQ=255)
aGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCgaga < 1:2360050/93‑1 (MQ=255)
aGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCgaga < 1:3534024/93‑1 (MQ=255)
cACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGc < 1:1884651/93‑1 (MQ=255)
|
AAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGC > NC_000913/3985651‑3985829
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAATA > NC_000913/3985648‑3985834
|
CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGC > SRR4302535.1932748/1‑94 (MQ=60)
CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGC > SRR4302535.204970/1‑94 (MQ=60)
GGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCA > SRR4302535.2464797/1‑94 (MQ=60)
AAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACC > SRR4302535.4594339/1‑94 (MQ=60)
AAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACC < SRR4302535.188195/94‑1 (MQ=60)
AGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCC > SRR4302535.1968946/1‑94 (MQ=60)
AGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCC < SRR4302535.1978068/94‑1 (MQ=60)
AGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCC > SRR4302535.776520/1‑94 (MQ=60)
CCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGT < SRR4302535.3184114/94‑1 (MQ=60)
CATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTG > SRR4302535.1609611/1‑94 (MQ=60)
CATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTG < SRR4302535.684473/94‑1 (MQ=60)
ATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGG > SRR4302535.3179413/1‑94 (MQ=60)
tctatatatgTTGCTGGCTTGACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGA < SRR4302535.31966/84‑1 (MQ=60)
CGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAG > SRR4302535.2954101/1‑94 (MQ=60)
CGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAG < SRR4302535.3486930/94‑1 (MQ=60)
GAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGA > SRR4302535.573189/1‑94 (MQ=60)
GAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGA > SRR4302535.2844157/1‑94 (MQ=60)
AGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAC > SRR4302535.1437076/1‑94 (MQ=60)
AGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAC > SRR4302535.3260329/1‑94 (MQ=60)
AGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAC > SRR4302535.1091871/1‑94 (MQ=60)
GATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACG > SRR4302535.1860350/1‑94 (MQ=60)
GATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACG < SRR4302535.1238377/94‑1 (MQ=60)
TATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTT < SRR4302535.3905969/94‑1 (MQ=60)
TATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTT < SRR4302535.1385600/94‑1 (MQ=60)
ATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTC < SRR4302535.2359658/94‑1 (MQ=60)
ATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTC > SRR4302535.3350644/1‑94 (MQ=60)
ATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTC < SRR4302535.999342/94‑1 (MQ=60)
TTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCT < SRR4302535.3764783/94‑1 (MQ=60)
TTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTC < SRR4302535.4464990/94‑1 (MQ=60)
TTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTC < SRR4302535.2765029/94‑1 (MQ=60)
TGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCA < SRR4302535.973622/94‑1 (MQ=60)
CTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGC > SRR4302535.2440774/1‑94 (MQ=60)
CTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCT > SRR4302535.2003201/1‑94 (MQ=60)
CTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCT > SRR4302535.4346017/1‑94 (MQ=60)
CTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCT > SRR4302535.2052921/1‑94 (MQ=60)
CTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCT > SRR4302535.4212093/1‑94 (MQ=60)
CTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCT < SRR4302535.2799336/94‑1 (MQ=60)
TAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGG < SRR4302535.839822/94‑1 (MQ=60)
TAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGG < SRR4302535.939288/94‑1 (MQ=60)
AACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGC > SRR4302535.4546387/1‑94 (MQ=60)
AACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGC > SRR4302535.2106400/1‑94 (MQ=60)
ACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCG > SRR4302535.2396132/1‑94 (MQ=60)
CTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGA > SRR4302535.2861995/1‑94 (MQ=60)
CCACCTCGTCGAGGAACGCTTTGGTGGTTGCATCATCAGTATCGTAGTAAGCACTCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGT > SRR4302535.4071202/1‑94 (MQ=60)
CCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGT < SRR4302535.60632/94‑1 (MQ=60)
CACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTC > SRR4302535.3485745/1‑94 (MQ=60)
CCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCT < SRR4302535.1646967/94‑1 (MQ=60)
ACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCT < SRR4302535.2840802/94‑1 (MQ=60)
ACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCT > SRR4302535.1169030/1‑94 (MQ=60)
CTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT > SRR4302535.4602071/1‑94 (MQ=60)
CTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT < SRR4302535.2500336/94‑1 (MQ=60)
CTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT < SRR4302535.4246082/94‑1 (MQ=60)
CTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT < SRR4302535.4711998/94‑1 (MQ=60)
TCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTT > SRR4302535.4220841/1‑94 (MQ=60)
TCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTT < SRR4302535.1323555/94‑1 (MQ=60)
GTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCATCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCC < SRR4302535.2528145/94‑1 (MQ=60)
gagggaacgGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCT < SRR4302535.2923857/85‑1 (MQ=60)
TCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCT < SRR4302535.2284072/94‑1 (MQ=60)
GCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCT < SRR4302535.3224243/94‑1 (MQ=60)
GAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGG > SRR4302535.4678530/1‑94 (MQ=60)
AGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGT > SRR4302535.1879887/1‑94 (MQ=60)
AGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGT < SRR4302535.1905757/94‑1 (MQ=60)
GAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGA > SRR4302535.4053810/1‑94 (MQ=60)
GAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGA > SRR4302535.361064/1‑94 (MQ=60)
GAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGA > SRR4302535.3763517/1‑94 (MQ=60)
AACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC > SRR4302535.3402142/1‑94 (MQ=60)
AACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC < SRR4302535.4485447/94‑1 (MQ=60)
AACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC > SRR4302535.3097968/1‑94 (MQ=60)
AACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC < SRR4302535.1161562/94‑1 (MQ=60)
ACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACG < SRR4302535.2457067/94‑1 (MQ=60)
GCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCG > SRR4302535.4406671/1‑94 (MQ=60)
GCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGACACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCG < SRR4302535.2526291/94‑1 (MQ=60)
GCTTTGGTGGTGCCATCATCAGCATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCCCCTGGCGATAAGTCTCTTCCTGGTGACGCG < SRR4302535.2725165/94‑1 (MQ=60)
CTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGG > SRR4302535.102008/1‑94 (MQ=60)
TTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTA > SRR4302535.4299529/1‑94 (MQ=60)
GGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACA < SRR4302535.3135374/94‑1 (MQ=60)
TGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGC < SRR4302535.1244700/94‑1 (MQ=60)
GGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCT > SRR4302535.965763/1‑94 (MQ=60)
GGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCT > SRR4302535.1952598/1‑94 (MQ=60)
TGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTG < SRR4302535.4426270/94‑1 (MQ=60)
TGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTG > SRR4302535.585133/1‑94 (MQ=60)
TGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTG < SRR4302535.4217657/94‑1 (MQ=60)
GGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTTCAGCTTGT < SRR4302535.2781268/94‑1 (MQ=60)
GGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGT < SRR4302535.4535422/94‑1 (MQ=60)
GGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGT < SRR4302535.1835361/94‑1 (MQ=60)
GGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCACCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGT < SRR4302535.3320693/94‑1 (MQ=60)
GCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTG < SRR4302535.2778967/94‑1 (MQ=60)
CATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGC > SRR4302535.1181358/1‑94 (MQ=60)
ATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCG < SRR4302535.3890945/94‑1 (MQ=60)
CAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGAC > SRR4302535.3318155/1‑94 (MQ=60)
CAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGAC > SRR4302535.299812/1‑94 (MQ=60)
AGTATCGTAGTAAGCACGCCCCCAGGTGGATACGGTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACC < SRR4302535.2956492/94‑1 (MQ=60)
AGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACC > SRR4302535.4521891/1‑94 (MQ=60)
AGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACC < SRR4302535.2956493/94‑1 (MQ=60)
AGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACC > SRR4302535.1555629/1‑94 (MQ=60)
TATCGTAGTAAGCATGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAG < SRR4302535.1574321/94‑1 (MQ=60)
TATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAG < SRR4302535.2231879/94‑1 (MQ=60)
TATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAG > SRR4302535.806470/1‑94 (MQ=60)
TATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAG < SRR4302535.1213578/94‑1 (MQ=60)
GATCGGAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAG < SRR4302535.197890/94‑1 (MQ=60)
ATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGC > SRR4302535.1935196/1‑94 (MQ=60)
ATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGC > SRR4302535.583266/1‑94 (MQ=60)
ATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGC < SRR4302535.2016901/94‑1 (MQ=60)
CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG < SRR4302535.2032142/94‑1 (MQ=60)
CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG > SRR4302535.2875808/1‑94 (MQ=60)
CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGGCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG > SRR4302535.4193572/1‑94 (MQ=60)
GTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGG < SRR4302535.1964365/94‑1 (MQ=60)
GTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGG < SRR4302535.3041313/94‑1 (MQ=60)
TAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGC < SRR4302535.3365806/94‑1 (MQ=60)
TAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGC < SRR4302535.909517/94‑1 (MQ=60)
TAGTAAGCACGCACCCAGGTGGAGACATTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGC > SRR4302535.767854/1‑94 (MQ=60)
AGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCG > SRR4302535.3553470/1‑94 (MQ=60)
AGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCG > SRR4302535.4161003/1‑94 (MQ=60)
TAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAG < SRR4302535.1551547/94‑1 (MQ=60)
TAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAG < SRR4302535.4064592/94‑1 (MQ=60)
TAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAG > SRR4302535.4634906/1‑94 (MQ=60)
AGCACGCACCCAGGTGGAGACTTACTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAG < SRR4302535.4506238/94‑1 (MQ=60)
AGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAG < SRR4302535.2376986/94‑1 (MQ=60)
AGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAG < SRR4302535.3558558/94‑1 (MQ=60)
AGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAG < SRR4302535.1023373/94‑1 (MQ=60)
GCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGC < SRR4302535.2753387/94‑1 (MQ=60)
CACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCG < SRR4302535.4158915/94‑1 (MQ=60)
CACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCG < SRR4302535.1898233/94‑1 (MQ=60)
ACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGA > SRR4302535.772089/1‑94 (MQ=60)
CACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAATA < SRR4302535.4338795/94‑1 (MQ=60)
CACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAATA > SRR4302535.4342423/1‑94 (MQ=60)
|
CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAATA > NC_000913/3985648‑3985834
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
