Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,011,749 |
A→G |
A369A (GCA→GCG) |
metE → |
tetrahydropteroyltriglutamate methyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,011,749 | 0 | A | G | 99.1%
| 651.6
/ ‑3.3
| 211 | A369A (GCA→GCG) | metE | tetrahydropteroyltriglutamate methyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (114/95); total (115/96) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 |
Only 100 of 229 total aligned reads displayed.
TGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGAT > NC_000913/4011659‑4011838
|
tGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACggcggc > 2:1622837/1‑93 (MQ=255)
tGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACggcggc > 2:2860833/1‑93 (MQ=255)
agCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGGCACACggcggc > 1:1171480/2‑93 (MQ=255)
cAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGctc < 2:2591723/93‑1 (MQ=255)
aGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGctct < 1:3489478/93‑1 (MQ=255)
gAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTg < 1:2748098/93‑1 (MQ=255)
gAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTg > 1:3139216/1‑93 (MQ=255)
aGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGc > 1:2962751/1‑93 (MQ=255)
gTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCa > 1:3812670/1‑93 (MQ=255)
gTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCa > 2:2050496/1‑93 (MQ=255)
gAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGATACGCCGGCTCTGGCaga > 2:3740314/1‑93 (MQ=255)
aaaGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGt < 1:4441308/93‑1 (MQ=255)
aaGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTg > 1:4360488/1‑93 (MQ=255)
gCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGa > 2:1907424/1‑93 (MQ=255)
cTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAg < 1:1823752/93‑1 (MQ=255)
tGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAgc < 2:2827478/93‑1 (MQ=255)
tGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAgc > 2:2249192/1‑93 (MQ=255)
tGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAgc > 1:2639108/1‑93 (MQ=255)
tGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAgc < 2:1455303/93‑1 (MQ=255)
tGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGAACTTCTGCGCGATGCGCTGCACCGTGGTGACACGGCGGCGCTGTCAGAGTGGAgg > 2:4572784/1‑92 (MQ=255)
gTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAgcgc > 1:2796455/1‑93 (MQ=255)
tttGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGcc > 1:4085700/1‑93 (MQ=255)
tttGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGcc > 1:4596378/1‑93 (MQ=255)
tGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGcccc > 1:319298/1‑93 (MQ=255)
ccTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGGTCTGGCAGAGGGGAGCGCCCCGa > 1:3669014/1‑93 (MQ=255)
ccTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCgc > 1:186492/1‑92 (MQ=255)
ccTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGa > 2:3507852/1‑93 (MQ=255)
cTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGAGGAGCGCCCCGAt > 1:2679549/1‑93 (MQ=255)
ttCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGAtt > 1:1121152/1‑93 (MQ=255)
ttCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGAtt > 2:1961166/1‑93 (MQ=255)
ttCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGAtt < 2:3637012/93‑1 (MQ=255)
tCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTc < 1:1686522/93‑1 (MQ=255)
cccTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAgg > 2:1388496/1‑93 (MQ=255)
cccTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAgg < 1:3080304/93‑1 (MQ=255)
ccTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGc < 2:3246095/93‑1 (MQ=255)
ccTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGc > 2:1931274/1‑93 (MQ=255)
cTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCa > 2:1451931/1‑93 (MQ=255)
cTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCa > 1:419668/1‑93 (MQ=255)
cTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCa < 1:46700/93‑1 (MQ=255)
aaaaaaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAcgt < 2:1736546/92‑1 (MQ=255)
aaaaaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAcgtc > 1:157015/1‑93 (MQ=255)
aaaaaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAcgtc < 2:2521943/93‑1 (MQ=255)
aaaaaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAcgtc < 1:2554169/93‑1 (MQ=255)
aaaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAcgtcgt > 2:309116/1‑93 (MQ=255)
aaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACgtcgtc > 2:4336410/1‑93 (MQ=255)
aaTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACgtcgtc < 2:4103713/93‑1 (MQ=255)
aTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCa < 2:447297/93‑1 (MQ=255)
aTGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGGGGAGCGCCCCGATTCAGGCACgtcgtcc > 2:3385102/1‑92 (MQ=255)
tGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCAc < 1:4498306/93‑1 (MQ=255)
gCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGAGGAGCGCCCCGATTCAGGCACGTCGTCAct > 1:633061/1‑93 (MQ=255)
ccATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCActc < 1:2850747/93‑1 (MQ=255)
ccATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCActc < 2:116133/93‑1 (MQ=255)
ccATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCActc < 2:1322625/93‑1 (MQ=255)
cATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCActct > 1:4517518/1‑93 (MQ=255)
cATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCActct > 2:3987271/1‑93 (MQ=255)
gAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTAcc > 1:4682784/1‑93 (MQ=255)
gAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTAcc > 1:1031644/1‑93 (MQ=255)
gAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCACGATTCAGGCACGTCGTCACTCTAcc < 2:943350/93‑1 (MQ=255)
aaCTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTAccc > 1:4000142/1‑93 (MQ=255)
cTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCcgc < 2:710698/93‑1 (MQ=255)
tGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCcgcg > 2:1562828/1‑93 (MQ=255)
cggCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCcgcg < 1:1182510/92‑1 (MQ=255)
ggCACTGCTGCGCGATGCGCTGAACAGTGGTGACGCGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTCCCCGCGt < 1:1391527/93‑1 (MQ=255)
ggCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGt > 1:3220436/1‑93 (MQ=255)
aCTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACa > 1:391983/1‑93 (MQ=255)
aCTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACa < 1:3973428/93‑1 (MQ=255)
aCTGCGGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACa < 2:3843109/93‑1 (MQ=255)
ctgctgCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACAt > 1:511357/1‑93 (MQ=255)
tgctgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATa < 1:3241470/93‑1 (MQ=255)
tgctgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATa < 1:2011790/93‑1 (MQ=255)
tgctgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATa > 2:2063596/1‑93 (MQ=255)
tgctgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCAGATTCAGGCACGTCGTCACTCTACCCGCGTAAATa > 1:2563939/1‑93 (MQ=255)
gctgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATaa > 1:1753343/1‑93 (MQ=255)
ctgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAAt < 2:2340105/93‑1 (MQ=255)
tgcGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATc < 1:4134934/93‑1 (MQ=255)
gcgATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCcgg < 2:2683788/93‑1 (MQ=255)
gATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCcggcg < 1:74651/93‑1 (MQ=255)
aTGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCcggcgg > 1:543879/1‑93 (MQ=255)
tGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCCCTCTACCCGCGTACATAATTCGGCTGt > 2:2871591/1‑93 (MQ=255)
tGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGt > 1:4014969/1‑93 (MQ=255)
tGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGt > 1:2086075/1‑93 (MQ=255)
cgcTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAg < 2:2618064/93‑1 (MQ=255)
tGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACTTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGaaa < 2:3658975/93‑1 (MQ=255)
tGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGaaa > 2:1337503/1‑93 (MQ=255)
tGAACAGTGGTGACACGGCGCCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGaaa > 2:4551571/1‑93 (MQ=255)
gAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGaaaa < 2:2734710/93‑1 (MQ=255)
gAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGaaaa > 1:2388437/1‑93 (MQ=255)
aaCAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAg < 2:1492274/93‑1 (MQ=255)
cAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCg > 2:157538/1‑93 (MQ=255)
aGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGt > 1:2995642/1‑93 (MQ=255)
gtggtgACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTc > 2:582152/1‑93 (MQ=255)
tggtgACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCt < 1:850375/93‑1 (MQ=255)
ggtgACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTg < 1:3522998/93‑1 (MQ=255)
ggtgACACGGCGGCTCTGGCAGAGTGGAGCCCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTg < 2:4169362/93‑1 (MQ=255)
gtgACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTgg > 2:2760779/1‑93 (MQ=255)
gtgACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTgg < 1:1310635/93‑1 (MQ=255)
gACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTggcg > 2:4140626/1‑93 (MQ=255)
gACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTggcg > 1:3319616/1‑93 (MQ=255)
acGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGgcggcg < 2:1055197/93‑1 (MQ=255)
ggcggcTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGAt > 2:3557466/1‑93 (MQ=255)
|
TGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGAT > NC_000913/4011659‑4011838
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGATCACC > NC_000913/4011657‑4011842
|
GATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGG > SRR4302535.4582994/1‑94 (MQ=60)
ATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGC > SRR4302535.2733263/1‑94 (MQ=60)
ATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGC > SRR4302535.1250790/1‑94 (MQ=60)
ATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGC > SRR4302535.2573436/1‑94 (MQ=60)
AAGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGGCACACGGCGGC > SRR4302535.1179843/1‑94 (MQ=60)
TGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCT > SRR4302535.3157257/1‑94 (MQ=60)
GCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTC < SRR4302535.4301534/94‑1 (MQ=60)
CAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCT > SRR4302535.3613843/1‑94 (MQ=60)
AGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTG > SRR4302535.3161060/1‑94 (MQ=60)
AGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTG < SRR4302535.3513723/94‑1 (MQ=60)
GAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGG < SRR4302535.2767687/94‑1 (MQ=60)
AAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGC > SRR4302535.2983549/1‑94 (MQ=60)
AGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCA > SRR4302535.4155762/1‑94 (MQ=60)
AGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCA > SRR4302535.3838982/1‑94 (MQ=60)
TGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGA > SRR4302535.1190878/1‑94 (MQ=60)
TGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGA > SRR4302535.458675/1‑94 (MQ=60)
AAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGT > SRR4302535.1693214/1‑94 (MQ=60)
AAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTG < SRR4302535.3280023/94‑1 (MQ=60)
AAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTG < SRR4302535.3738034/94‑1 (MQ=60)
AAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTG > SRR4302535.3807814/1‑94 (MQ=60)
AAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTG > SRR4302535.4390331/1‑94 (MQ=60)
AAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTG < SRR4302535.4471760/94‑1 (MQ=60)
AAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGG < SRR4302535.2439529/94‑1 (MQ=60)
GCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAG < SRR4302535.2356243/94‑1 (MQ=60)
GTGGTTTGCCTTCGCCCTACAAAAATCCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGGGGTGACACGGCGGCTCTGGCAGAGTGGAGC < SRR4302535.86573/94‑1 (MQ=60)
CTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGC < SRR4302535.1836921/94‑1 (MQ=60)
CTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGC > SRR4302535.2658012/1‑94 (MQ=60)
TGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCG < SRR4302535.4505500/94‑1 (MQ=60)
GGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGC > SRR4302535.2816356/1‑94 (MQ=60)
GTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCC > SRR4302535.4627651/1‑94 (MQ=60)
GTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCC > SRR4302535.4113654/1‑94 (MQ=60)
TTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCC > SRR4302535.321506/1‑94 (MQ=60)
GCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGGTCTGGCAGAGGGGAGCGCCCCGA > SRR4302535.3694425/1‑94 (MQ=60)
GCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGC > SRR4302535.187780/1‑94 (MQ=60)
GCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGA > SRR4302535.1949927/1‑94 (MQ=60)
GCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGA > SRR4302535.4544109/1‑94 (MQ=60)
GCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGA > SRR4302535.296807/1‑94 (MQ=60)
CCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGAT > SRR4302535.4026789/1‑94 (MQ=60)
CCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGAGGAGCGCCCCGAT > SRR4302535.2698718/1‑94 (MQ=60)
CTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATT < SRR4302535.2710336/94‑1 (MQ=60)
CTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATT > SRR4302535.1129147/1‑94 (MQ=60)
TTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTC < SRR4302535.3009962/94‑1 (MQ=60)
TCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCA < SRR4302535.1698731/94‑1 (MQ=60)
CGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCATAGTGGAGCGCCCCGATTCAG < SRR4302535.2593267/94‑1 (MQ=60)
GCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGG > SRR4302535.3199627/1‑94 (MQ=60)
GCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGG < SRR4302535.4171412/94‑1 (MQ=60)
GCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGC > SRR4302535.3092784/1‑94 (MQ=60)
CCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGC < SRR4302535.181815/94‑1 (MQ=60)
CCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGC < SRR4302535.4059757/94‑1 (MQ=60)
CCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGC > SRR4302535.403609/1‑94 (MQ=60)
CCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGC < SRR4302535.3101781/94‑1 (MQ=60)
CCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGC < SRR4302535.4024639/94‑1 (MQ=60)
CCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCA > SRR4302535.422602/1‑94 (MQ=60)
CCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGAGCCCCGATTCAGGCA > SRR4302535.96172/1‑94 (MQ=60)
CTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAC < SRR4302535.47052/94‑1 (MQ=60)
CTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAC > SRR4302535.1676242/1‑94 (MQ=60)
CTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCAC > SRR4302535.2816239/1‑94 (MQ=60)
TACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACG > SRR4302535.1199011/1‑94 (MQ=60)
CAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTC > SRR4302535.158124/1‑94 (MQ=60)
AAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCG < SRR4302535.3935619/94‑1 (MQ=60)
AAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCG < SRR4302535.2572556/94‑1 (MQ=60)
AAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTC > SRR4302535.4518663/1‑94 (MQ=60)
AATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCA > SRR4302535.2866609/1‑94 (MQ=60)
TGCCATGAACTGGCACTGCTGCGCGGTGCGCTGAACAGTGGGGACAGGGCGGCCCTGGCAGAGTGGGTCGCCCCGATgctggcaggtcggcgcc > SRR4302535.641296/1‑77 (MQ=45)
TGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACT < SRR4302535.4529189/94‑1 (MQ=60)
TGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGAGGAGCGCCCCGATTCAGGCACGTCGTCACT > SRR4302535.637474/1‑94 (MQ=60)
CCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCT > SRR4302535.4548481/1‑94 (MQ=60)
CCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCT < SRR4302535.2569005/94‑1 (MQ=60)
CCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCT > SRR4302535.2674988/1‑94 (MQ=60)
CCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCT < SRR4302535.2870948/94‑1 (MQ=60)
ATGAACTGGCGCTGCTGCGCGATGCGCGGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTAC < SRR4302535.1706246/94‑1 (MQ=60)
ATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTAC > SRR4302535.1895679/1‑94 (MQ=60)
TGAACTGGCACTGCTGCGCGATGCGCTGAACAGTTGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACC > SRR4302535.624229/1‑94 (MQ=60)
TGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACC > SRR4302535.4714445/1‑94 (MQ=60)
TGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACC > SRR4302535.1038971/1‑94 (MQ=60)
GAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCC > SRR4302535.4027508/1‑94 (MQ=60)
CTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCG > SRR4302535.685304/1‑94 (MQ=60)
CTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCG < SRR4302535.204420/94‑1 (MQ=60)
TGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGT > SRR4302535.3242753/1‑94 (MQ=60)
TGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGT > SRR4302535.502844/1‑94 (MQ=60)
CGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGT < SRR4302535.1190955/94‑1 (MQ=60)
GGCACTGCTGCGCGATGCGCTGAACAGTGGTGACGCGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTCCCCGCGTA < SRR4302535.1401459/94‑1 (MQ=60)
GGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTA < SRR4302535.578564/94‑1 (MQ=60)
CACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACA > SRR4302535.394717/1‑94 (MQ=60)
ACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACAT > SRR4302535.1859465/1‑94 (MQ=60)
ACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACAT < SRR4302535.4000569/94‑1 (MQ=60)
ACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACAT > SRR4302535.514933/1‑94 (MQ=60)
ACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACAT > SRR4302535.514932/1‑94 (MQ=60)
ACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACAT > SRR4302535.3545879/1‑94 (MQ=60)
ACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACAT < SRR4302535.3253181/94‑1 (MQ=60)
CTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCAGATTCAGGCACGTCGTCACTCTACCCGCGTAAATA > SRR4302535.2582393/1‑94 (MQ=60)
TGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAA > SRR4302535.4701505/1‑94 (MQ=60)
TGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAA < SRR4302535.3263983/94‑1 (MQ=60)
TGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAA > SRR4302535.1766013/1‑94 (MQ=60)
TGCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAA < SRR4302535.2026285/94‑1 (MQ=60)
GCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAAT < SRR4302535.3276606/94‑1 (MQ=60)
GCTGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAAT < SRR4302535.152160/94‑1 (MQ=60)
TGCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCC < SRR4302535.4163249/94‑1 (MQ=60)
GCGCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCG < SRR4302535.4457153/94‑1 (MQ=60)
CGGGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGG < SRR4302535.117689/94‑1 (MQ=60)
GCGATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGC < SRR4302535.3423765/94‑1 (MQ=60)
GATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGG < SRR4302535.75197/94‑1 (MQ=60)
GATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGG > SRR4302535.547682/1‑94 (MQ=60)
ATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGT > SRR4302535.4042428/1‑94 (MQ=60)
ATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGT > SRR4302535.2101097/1‑94 (MQ=60)
ATGCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGCCGGT > SRR4302535.399529/1‑94 (MQ=60)
GCGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAG < SRR4302535.1355072/94‑1 (MQ=60)
CGCTGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGA > SRR4302535.1046793/1‑94 (MQ=60)
TGAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAA > SRR4302535.2405607/1‑94 (MQ=60)
GAACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAG < SRR4302535.414071/94‑1 (MQ=60)
AACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGC > SRR4302535.2925252/1‑94 (MQ=60)
ACAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCG < SRR4302535.4710285/94‑1 (MQ=60)
CAGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGT > SRR4302535.3016642/1‑94 (MQ=60)
AGTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTC < SRR4302535.4668661/94‑1 (MQ=60)
GTGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCT < SRR4302535.3232862/94‑1 (MQ=60)
TGGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTG < SRR4302535.856363/94‑1 (MQ=60)
GGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGG < SRR4302535.3547464/94‑1 (MQ=60)
GGTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGG < SRR4302535.83187/94‑1 (MQ=60)
GTGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGC < SRR4302535.1320003/94‑1 (MQ=60)
TGACACGGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCG > SRR4302535.3342712/1‑94 (MQ=60)
GGCGGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGATC < SRR4302535.3198609/94‑1 (MQ=60)
GGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGATCACC > SRR4302535.3957263/1‑94 (MQ=60)
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GATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGATCACC > NC_000913/4011657‑4011842
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
