Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,013,176 |
C→G |
G182R (GGA→CGA) |
ysgA ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,013,176 | 0 | C | G | 100.0%
| 661.1
/ NA
| 207 | G182R (GGA→CGA) | ysgA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (126/81); total (126/81) |
Only 100 of 214 total aligned reads displayed.
TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC > NC_000913/4013092‑4013260
|
ttAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTa > 1:1344908/1‑93 (MQ=255)
ttAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTa > 1:522222/1‑93 (MQ=255)
ttAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTa > 2:3952996/1‑93 (MQ=255)
agcagcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAg < 2:532829/93‑1 (MQ=255)
gcagcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGa > 2:3446685/1‑93 (MQ=255)
cagcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGAt < 1:2168023/93‑1 (MQ=255)
agcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATc < 2:1767217/93‑1 (MQ=255)
gcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCg > 1:1098375/1‑93 (MQ=255)
cccGCCGCGCCTGGCGCTCGTTTTCACTCATCTCCTGCGAAATGCTGTAATCCTAACCACCATATAAGCCGAAAATCGGCGCGTTAAGATCgg < 2:81653/93‑1 (MQ=255)
cccGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATCCTGTTATCCTGACCGCCATATAAGCCGACAATCGGCGCGTTAAGATCgg < 2:4392649/93‑1 (MQ=255)
ccGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGt > 2:1190703/1‑93 (MQ=255)
ccGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGt < 1:4465600/93‑1 (MQ=255)
ccGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGt < 1:2340042/93‑1 (MQ=255)
cGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGtt < 2:408840/93‑1 (MQ=255)
gCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTg > 1:1931050/1‑93 (MQ=255)
cAGCGCCTGGCTCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGc < 2:2434455/93‑1 (MQ=255)
cAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGc > 1:3670610/1‑93 (MQ=255)
cAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGc < 2:3693651/93‑1 (MQ=255)
aGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGCGCGTTAAGATCGGTTGCg > 1:1957414/1‑93 (MQ=255)
gcgcCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGa < 1:915510/93‑1 (MQ=255)
gcgcCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGa > 1:1409417/1‑93 (MQ=255)
cgcCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGat < 2:2999348/93‑1 (MQ=255)
cgcCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGat < 1:2042533/93‑1 (MQ=255)
gcCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGata > 2:2171234/1‑93 (MQ=255)
cTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATc > 1:3177837/1‑93 (MQ=255)
cTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGATAAGATCGGTTGCGATATc < 2:4578830/93‑1 (MQ=255)
tGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCa < 1:451403/93‑1 (MQ=255)
gcgcATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAAc < 2:2419385/93‑1 (MQ=255)
gcgcATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAAc > 2:3723960/1‑93 (MQ=255)
cgcATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACa < 2:4301202/93‑1 (MQ=255)
gcATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAg > 1:4249948/1‑93 (MQ=255)
gcATAGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACAATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAg < 2:1293324/93‑1 (MQ=255)
cATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAgg > 2:3182784/1‑93 (MQ=255)
cATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAgg < 1:3601239/93‑1 (MQ=255)
aTGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgt < 2:2986753/93‑1 (MQ=255)
tGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgtt > 2:4638431/1‑93 (MQ=255)
tGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgtt > 2:3470337/1‑93 (MQ=255)
tGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgtt > 2:3745035/1‑93 (MQ=255)
tGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgtt > 2:1272930/1‑93 (MQ=255)
tGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgtt > 1:1241715/1‑93 (MQ=255)
ggTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCGTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgttg > 1:2518010/1‑93 (MQ=255)
ggTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgttg > 2:1633862/1‑93 (MQ=255)
gTTTCAACGCTCTCTTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgttgt < 2:2492925/93‑1 (MQ=255)
gTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgttgt > 2:2244771/1‑93 (MQ=255)
tttCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgttgtt < 2:1488236/93‑1 (MQ=255)
tCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGGCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTc > 2:3871145/1‑93 (MQ=255)
cAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCg < 1:3142308/93‑1 (MQ=255)
aaCGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCgg < 2:109408/93‑1 (MQ=255)
aCGCTCTCCTGCGGAATGCTGTTATCCTTACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGt < 2:1457894/93‑1 (MQ=255)
aCGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGt > 2:3975911/1‑93 (MQ=255)
aCGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGt < 1:4653212/93‑1 (MQ=255)
aCGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGt < 1:4187288/93‑1 (MQ=255)
cGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTg > 2:3050064/1‑93 (MQ=255)
gCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGa > 2:656894/1‑93 (MQ=255)
ctctCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGaa < 2:325714/93‑1 (MQ=255)
tctcCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAt < 2:3527599/93‑1 (MQ=255)
tctcCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAt > 2:3355145/1‑93 (MQ=255)
tctcCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAt > 2:3302497/1‑93 (MQ=255)
tctcCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAt > 2:3875408/1‑93 (MQ=255)
tctcCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAt > 1:3883660/1‑93 (MQ=255)
ctcCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAtt > 2:191067/1‑93 (MQ=255)
tcCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTc > 2:4010750/1‑93 (MQ=255)
cTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAg > 2:4041308/1‑93 (MQ=255)
cTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAg > 2:3477862/1‑93 (MQ=255)
tGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGc < 1:4237597/93‑1 (MQ=255)
tGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGc > 1:608578/1‑93 (MQ=255)
tGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGc < 2:1142030/93‑1 (MQ=255)
gCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCg < 1:1200347/93‑1 (MQ=255)
ggAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGAc > 1:3715013/1‑93 (MQ=255)
ggAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGAc < 2:3635583/93‑1 (MQ=255)
gAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACt < 2:1805334/93‑1 (MQ=255)
aaTGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCATTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACtt > 1:3305061/1‑93 (MQ=255)
tGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGt > 2:4428588/1‑93 (MQ=255)
tGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGt > 1:2200997/1‑93 (MQ=255)
tGCTGTTATCC‑GACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTc > 2:1662745/1‑93 (MQ=255)
tGTTATCCTGACCACCATATAAGCTGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGc > 1:3584917/1‑93 (MQ=255)
tGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGc > 1:441940/1‑93 (MQ=255)
tGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGc > 2:726562/1‑93 (MQ=255)
ttATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGccc < 1:1565197/93‑1 (MQ=255)
ttATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGccc > 1:1134583/1‑93 (MQ=255)
tCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTc > 1:2289350/1‑93 (MQ=255)
ccTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCa < 1:1006666/93‑1 (MQ=255)
tGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGt < 1:679397/93‑1 (MQ=255)
accaccATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGttt < 1:4264399/93‑1 (MQ=255)
ccaccaTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTg > 1:797027/1‑93 (MQ=255)
accaTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGcc > 2:1958166/1‑93 (MQ=255)
accaTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGcc > 2:1742137/1‑93 (MQ=255)
ccaTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCg < 2:904356/93‑1 (MQ=255)
acaTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCg > 1:4308021/2‑93 (MQ=255)
caTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGt > 2:4423992/1‑93 (MQ=255)
atatAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCCGTTTGCCGTa > 2:3012294/1‑93 (MQ=255)
atatAAGACGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTa > 2:2573695/1‑93 (MQ=255)
tataAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAc > 1:2977731/1‑93 (MQ=255)
ataAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAcc > 2:2805905/1‑93 (MQ=255)
gCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGc > 2:2069095/1‑93 (MQ=255)
ccGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGcc > 1:175966/1‑93 (MQ=255)
cGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCa < 1:3840328/93‑1 (MQ=255)
cGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCa > 1:1688526/1‑93 (MQ=255)
gagaATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAc > 2:2278660/1‑93 (MQ=255)
gagaATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGGTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAc > 1:2442701/1‑93 (MQ=255)
|
TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC > NC_000913/4013092‑4013260
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑GCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACTG > NC_000913/4013083‑4013262
|
TCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG < SRR4302535.2311644/94‑1 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG > SRR4302535.2512139/1‑94 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG < SRR4302535.2643790/94‑1 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG > SRR4302535.2920520/1‑94 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG < SRR4302535.3378739/94‑1 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG < SRR4302535.4486822/94‑1 (MQ=60)
CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGG > SRR4302535.1754233/1‑94 (MQ=60)
CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGG > SRR4302535.3894786/1‑94 (MQ=60)
TTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑GC > SRR4302535.3315657/1‑94 (MQ=60)
TTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑GCG < SRR4302535.1437155/94‑1 (MQ=60)
ATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTA > SRR4302535.1354510/1‑94 (MQ=60)
ATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTA > SRR4302535.525876/1‑94 (MQ=60)
TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAA < SRR4302535.2216021/94‑1 (MQ=60)
CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATC < SRR4302535.1738460/94‑1 (MQ=60)
CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATC < SRR4302535.2183559/94‑1 (MQ=60)
CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATC < SRR4302535.2153547/94‑1 (MQ=60)
CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATC < SRR4302535.1297700/94‑1 (MQ=60)
AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCG < SRR4302535.4278690/94‑1 (MQ=60)
AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCG < SRR4302535.2754353/94‑1 (MQ=60)
AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCG > SRR4302535.1106197/1‑94 (MQ=60)
GCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGG > SRR4302535.3725295/1‑94 (MQ=60)
CCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGATCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGT > SRR4302535.1607412/1‑94 (MQ=60)
CCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTT < SRR4302535.4496230/94‑1 (MQ=60)
CCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTT < SRR4302535.2356782/94‑1 (MQ=60)
CCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTT > SRR4302535.2298589/1‑94 (MQ=60)
CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTG > SRR4302535.1944967/1‑94 (MQ=60)
GCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGC > SRR4302535.3640292/1‑94 (MQ=60)
GCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGC > SRR4302535.3696029/1‑94 (MQ=60)
CAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGCGCG‑‑TTAAGATCGGTTGCG > SRR4302535.1971504/1‑94 (MQ=60)
AGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGA > SRR4302535.1419482/1‑94 (MQ=60)
GCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGAT < SRR4302535.922010/94‑1 (MQ=60)
GCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGAT > SRR4302535.7203/1‑94 (MQ=60)
GCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGAT < SRR4302535.4514376/94‑1 (MQ=60)
CGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATA < SRR4302535.2057249/94‑1 (MQ=60)
CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATC > SRR4302535.3199818/1‑94 (MQ=60)
CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATC > SRR4302535.3307059/1‑94 (MQ=60)
CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATC > SRR4302535.180303/1‑94 (MQ=60)
CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATC > SRR4302535.4219654/1‑94 (MQ=60)
CTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCA < SRR4302535.227678/94‑1 (MQ=60)
TGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAA < SRR4302535.454565/94‑1 (MQ=60)
TGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCACATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAA > SRR4302535.2377736/1‑94 (MQ=60)
CGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAG > SRR4302535.4279059/1‑94 (MQ=60)
CGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAG > SRR4302535.4312567/1‑94 (MQ=60)
CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGT < SRR4302535.1231415/94‑1 (MQ=60)
CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGT > SRR4302535.4699042/1‑94 (MQ=60)
CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGT < SRR4302535.3626228/94‑1 (MQ=60)
ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTT > SRR4302535.4409775/1‑94 (MQ=60)
ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTT > SRR4302535.1250585/1‑94 (MQ=60)
ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTT > SRR4302535.4512147/1‑94 (MQ=60)
TGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCGTATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTG > SRR4302535.2536160/1‑94 (MQ=60)
TGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTG > SRR4302535.669193/1‑94 (MQ=60)
GTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTT < SRR4302535.588930/94‑1 (MQ=60)
TTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTC > SRR4302535.1180568/1‑94 (MQ=60)
TCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCG < SRR4302535.4481318/94‑1 (MQ=60)
TCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCG < SRR4302535.4190673/94‑1 (MQ=60)
CAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGG < SRR4302535.3164172/94‑1 (MQ=60)
ACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTG < SRR4302535.4215945/94‑1 (MQ=60)
ACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTG < SRR4302535.4684716/94‑1 (MQ=60)
ACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTG > SRR4302535.3613160/1‑94 (MQ=60)
CGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGA > SRR4302535.3195403/1‑94 (MQ=60)
CTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAT > SRR4302535.3910303/1‑94 (MQ=60)
TCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATT > SRR4302535.4204716/1‑94 (MQ=60)
TCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCA < SRR4302535.1667016/94‑1 (MQ=60)
TCCTGCGGAATGCTGTGATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCA < SRR4302535.1111008/94‑1 (MQ=60)
CCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGTATTCAG > SRR4302535.2030562/1‑94 (MQ=60)
CCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAG < SRR4302535.194438/94‑1 (MQ=60)
CTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGC > SRR4302535.612824/1‑94 (MQ=60)
TGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG < SRR4302535.4266596/94‑1 (MQ=60)
GCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGA < SRR4302535.1208948/94‑1 (MQ=60)
CGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGAC > SRR4302535.3740749/1‑94 (MQ=60)
GAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑GCGCATTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTT > SRR4302535.3328055/1‑94 (MQ=60)
ATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGT > SRR4302535.2216686/1‑94 (MQ=60)
TGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTC < SRR4302535.3555948/94‑1 (MQ=60)
GCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCC > SRR4302535.3220735/1‑94 (MQ=60)
CTGTTATCCTGACCACCATATAAGCTGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGC > SRR4302535.3609782/1‑94 (MQ=60)
CTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGC > SRR4302535.445035/1‑94 (MQ=60)
GTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCC > SRR4302535.3868049/1‑94 (MQ=60)
GTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCC > SRR4302535.1142679/1‑94 (MQ=60)
TTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCG < SRR4302535.3005979/94‑1 (MQ=60)
TTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCG < SRR4302535.1576499/94‑1 (MQ=60)
ATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC > SRR4302535.2305703/1‑94 (MQ=60)
ATCCTGACCACCATATAAGACGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC > SRR4302535.4657571/1‑94 (MQ=60)
CCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAG < SRR4302535.1013822/94‑1 (MQ=60)
TGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTT < SRR4302535.684152/94‑1 (MQ=60)
TGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTT > SRR4302535.1379947/1‑94 (MQ=60)
ACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG < SRR4302535.4293602/94‑1 (MQ=60)
ACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG > SRR4302535.811166/1‑94 (MQ=60)
ACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG > SRR4302535.802623/1‑94 (MQ=60)
ACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG > SRR4302535.2348758/1‑94 (MQ=60)
AACATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCG > SRR4302535.4337494/1‑94 (MQ=60)
ATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC > SRR4302535.2998621/1‑94 (MQ=60)
ATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC < SRR4302535.3754672/94‑1 (MQ=60)
ATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC > SRR4302535.1044183/1‑94 (MQ=60)
ATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCA > SRR4302535.156411/1‑94 (MQ=60)
AAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACG < SRR4302535.4292856/94‑1 (MQ=60)
AAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGGTGTTTCGGTGACTTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACG > SRR4302535.3043757/1‑94 (MQ=60)
GCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCC > SRR4302535.177189/1‑94 (MQ=60)
CCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCA > SRR4302535.1002709/1‑94 (MQ=60)
CCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCA > SRR4302535.1700749/1‑94 (MQ=60)
CGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC > SRR4302535.96312/1‑94 (MQ=60)
CGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC < SRR4302535.3866792/94‑1 (MQ=60)
CGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGGTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC > SRR4302535.2460298/1‑94 (MQ=60)
GAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT < SRR4302535.2473487/94‑1 (MQ=60)
GAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT > SRR4302535.926705/1‑94 (MQ=60)
GAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT > SRR4302535.3005325/1‑94 (MQ=60)
AGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACTG < SRR4302535.4271537/94‑1 (MQ=60)
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GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑GCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACTG > NC_000913/4013083‑4013262
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
