Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,084,090 |
A→G |
Q165Q (CAA→CAG) |
fdhD → |
affects formate dehydrogenase‑N |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,084,090 | 0 | A | G | 100.0%
| 634.3
/ NA
| 198 | Q165Q (CAA→CAG) | fdhD | affects formate dehydrogenase‑N |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (110/88); total (110/88) |
Only 100 of 228 total aligned reads displayed.
GGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAACTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCT > NC_000913/4084000‑4084179
|
gTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctg > 1:3318567/1‑93 (MQ=255)
gTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctg > 1:1620013/1‑93 (MQ=255)
gTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctg < 1:2490809/93‑1 (MQ=255)
tGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctga < 2:2627378/93‑1 (MQ=255)
tGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctga < 1:3119370/93‑1 (MQ=255)
gcgCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctgact < 1:3669636/91‑1 (MQ=255)
cAGCCGCTACCGTTCACCCAGACGTTTGATCTCGACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctgact > 1:3221890/1‑93 (MQ=255)
cAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctgact < 2:1107075/93‑1 (MQ=255)
cAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctgact < 2:4607023/93‑1 (MQ=255)
cAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctgact < 2:4590226/93‑1 (MQ=255)
cAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctgact < 1:3044196/93‑1 (MQ=255)
aGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAgctgactg < 1:4053192/93‑1 (MQ=255)
gCCGCTAACGTTCACACAGAAGATTGATATCAACAAACTGGATGATGCATTACGTCATCTCGACGATTTTAAGCCAGTGGGGCAGCTGACTgg > 2:2024508/1‑93 (MQ=255)
gCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTg < 2:4061172/93‑1 (MQ=255)
tACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTa < 1:1034828/93‑1 (MQ=255)
aCCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTAc < 1:1240179/93‑1 (MQ=255)
aCCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTAc < 1:2344417/93‑1 (MQ=255)
aCCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTAc > 1:4510506/1‑93 (MQ=255)
aCCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTAc < 1:2928059/93‑1 (MQ=255)
aCCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTAc < 2:1162355/93‑1 (MQ=255)
ccGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACt < 2:2496762/93‑1 (MQ=255)
ccGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACt < 2:3006425/93‑1 (MQ=255)
gTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCa > 1:1688315/1‑93 (MQ=255)
ttCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCAc < 2:2351717/93‑1 (MQ=255)
ttCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCAc > 2:2164679/1‑93 (MQ=255)
aCCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCAcgcc > 1:2584914/1‑93 (MQ=255)
cccAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCAcgccg > 2:695641/1‑93 (MQ=255)
ccAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGCGCAGCTGACTGGTTGTACTCAcgccgc > 1:2141519/1‑93 (MQ=255)
cAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCt < 2:3947311/93‑1 (MQ=255)
cAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCt > 2:3830279/1‑93 (MQ=255)
cGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCt < 1:396415/93‑1 (MQ=255)
gTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTg > 2:3237925/1‑93 (MQ=255)
tttGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTgg > 1:4358421/1‑93 (MQ=255)
ttGTTCTCAACATACTGGATGATCCAGTGCGTCATCTCAACGATTTTCAGGCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGa > 2:3022050/1‑93 (MQ=255)
taTCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATg < 1:4614800/92‑1 (MQ=255)
gATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGCATg > 2:1580173/1‑93 (MQ=255)
aTCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGt > 2:161542/1‑93 (MQ=255)
tcAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGc > 1:4678914/1‑93 (MQ=255)
caacaaACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGcc > 2:2576248/1‑93 (MQ=255)
aacaaACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCa < 2:2233739/93‑1 (MQ=255)
acaaACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCAt < 1:1439489/93‑1 (MQ=255)
acaaACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCAt > 2:1277820/1‑93 (MQ=255)
acaaACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCAt > 2:1745938/1‑93 (MQ=255)
aaCTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTg < 1:412789/93‑1 (MQ=255)
aCTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTgg > 2:2337015/1‑93 (MQ=255)
cTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGc > 2:4237364/1‑93 (MQ=255)
tGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTCCTCACGCCGCTGCCTGGATGTTGCCCTCTGGcc > 2:2199329/1‑92 (MQ=255)
tGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCg > 1:1318512/1‑93 (MQ=255)
ggATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGa > 1:3411883/1‑93 (MQ=255)
gatgatGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGaa > 1:4378758/1‑93 (MQ=255)
atgatgCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGaat > 1:2692091/1‑92 (MQ=255)
atgatgCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAAc < 1:1426704/93‑1 (MQ=255)
tgCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGt > 1:1009421/1‑93 (MQ=255)
tgCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGt < 2:1944874/93‑1 (MQ=255)
gCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTc < 2:3504198/93‑1 (MQ=255)
gCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTc > 2:93000/1‑93 (MQ=255)
gCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTc < 2:2820706/93‑1 (MQ=255)
gCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTc < 1:1813687/93‑1 (MQ=255)
gCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTc < 1:3589765/93‑1 (MQ=255)
cATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTcg < 1:988280/93‑1 (MQ=255)
aTTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTcgg > 1:1693309/1‑93 (MQ=255)
aTTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTcgg > 1:3581392/1‑93 (MQ=255)
ttACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTcggg > 2:883269/1‑92 (MQ=255)
ttACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTcggc > 1:4434385/1‑93 (MQ=255)
ttACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTcggc > 2:528838/1‑93 (MQ=255)
cATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCAt < 1:1940236/93‑1 (MQ=255)
cATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCAt < 1:1723084/93‑1 (MQ=255)
aTCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATg < 1:243462/93‑1 (MQ=255)
aTCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATg > 1:1349784/1‑93 (MQ=255)
tctcAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGa < 2:3787007/93‑1 (MQ=255)
tctcAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGa < 2:3146852/93‑1 (MQ=255)
tctcAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGa < 1:788266/93‑1 (MQ=255)
aaCGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGAc > 1:1782246/1‑93 (MQ=255)
aCGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACg > 1:3436744/1‑93 (MQ=255)
cGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGAccg > 1:2446466/1‑91 (MQ=255)
cGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGt < 2:2773299/93‑1 (MQ=255)
gATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTg > 1:1157247/1‑93 (MQ=255)
gATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTg > 1:3913702/1‑93 (MQ=255)
tttttCAGCGAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTgg < 1:3883577/92‑1 (MQ=255)
aTTTTCAGCCAGTGGGGCGGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTgg < 2:2515751/93‑1 (MQ=255)
aTTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACgggg > 2:3032473/1‑93 (MQ=255)
aTTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGtcg < 2:2956281/93‑3 (MQ=255)
aTTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTgg > 2:1053135/1‑93 (MQ=255)
aTTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTgg > 2:1858403/1‑93 (MQ=255)
aTTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTgg < 2:3855344/93‑1 (MQ=255)
ttttCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTggg > 1:1845474/1‑93 (MQ=255)
ttttCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTggg > 2:565979/1‑93 (MQ=255)
ttCAGCCGGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGGCGGCGGGCATGAAGACGTggggc > 1:3101651/1‑91 (MQ=255)
cAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGc > 2:2108255/1‑93 (MQ=255)
gCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCa > 2:4525434/1‑93 (MQ=255)
gCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCa > 2:1462839/1‑93 (MQ=255)
ccAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGGCGccct > 1:3939782/1‑91 (MQ=255)
cAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGAGCATGAAGACGTGGGTCGCCAtg > 2:858659/1‑93 (MQ=255)
aGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCAtgt < 2:3370229/93‑1 (MQ=255)
gTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCAtgtg > 1:2054385/1‑93 (MQ=255)
gggCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAAATGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGgcg > 2:698427/1‑93 (MQ=255)
ggCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGgcgc < 2:2712843/93‑1 (MQ=255)
ggCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGgcgc > 1:4205745/1‑93 (MQ=255)
ggCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGgcgc < 1:2642858/93‑1 (MQ=255)
gCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCt < 2:4291332/93‑1 (MQ=255)
|
GGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAACTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCT > NC_000913/4084000‑4084179
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCGGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAACTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCTGGA > NC_000913/4083997‑4084182
|
ACCGGTGCAGCCGCTCCCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAG < SRR4302535.4672377/94‑1 (MQ=60)
ACCGGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAG < SRR4302535.1051054/94‑1 (MQ=60)
CGGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATTATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCT < SRR4302535.2533383/94‑1 (MQ=60)
CGGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCT < SRR4302535.1723605/94‑1 (MQ=60)
CGGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCT > SRR4302535.381863/1‑94 (MQ=60)
GGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTG > SRR4302535.3341657/1‑94 (MQ=60)
GGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTG > SRR4302535.1631698/1‑94 (MQ=60)
GTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGA > SRR4302535.4196124/1‑94 (MQ=60)
GTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGA < SRR4302535.2508776/94‑1 (MQ=60)
TGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGAC < SRR4302535.3445065/94‑1 (MQ=60)
TGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGAC < SRR4302535.3141087/94‑1 (MQ=60)
GCAGCCGCTACCGTTCACCCAGACGTTTGATCTCGACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACT > SRR4302535.3244220/1‑94 (MQ=60)
gcGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTG < SRR4302535.3695051/92‑1 (MQ=60)
CAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTG < SRR4302535.3695052/94‑1 (MQ=60)
CAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTG < SRR4302535.3065521/94‑1 (MQ=60)
CAGCAGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCTAGTGGGGCAGCTGACTG > SRR4302535.2462204/1‑94 (MQ=60)
AGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGG < SRR4302535.4080946/94‑1 (MQ=60)
GCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGT > SRR4302535.1272988/1‑94 (MQ=60)
CTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTA < SRR4302535.3955320/94‑1 (MQ=60)
TACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTAC > SRR4302535.795831/1‑94 (MQ=60)
TACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTAC < SRR4302535.1042179/94‑1 (MQ=60)
TACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTAC > SRR4302535.4541448/1‑94 (MQ=60)
ACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACT < SRR4302535.2948694/94‑1 (MQ=60)
ACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACT < SRR4302535.2361214/94‑1 (MQ=60)
ACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACT < SRR4302535.1886601/94‑1 (MQ=60)
ACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACT < SRR4302535.4274013/94‑1 (MQ=60)
ACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACT < SRR4302535.1249032/94‑1 (MQ=60)
CCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTC < SRR4302535.3123875/94‑1 (MQ=60)
CGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCA > SRR4302535.1569333/1‑94 (MQ=60)
CGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCA > SRR4302535.1700538/1‑94 (MQ=60)
CACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCC < SRR4302535.1272552/94‑1 (MQ=60)
CACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCC > SRR4302535.2603479/1‑94 (MQ=60)
ACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCG < SRR4302535.3189867/94‑1 (MQ=60)
CCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGCGCAGCTGACTGGTTGTACTCACGCCGC > SRR4302535.2156931/1‑94 (MQ=60)
CCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCT > SRR4302535.2540845/1‑94 (MQ=60)
CCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCT < SRR4302535.2572171/94‑1 (MQ=60)
CGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTG > SRR4302535.4668897/1‑94 (MQ=60)
CGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTG < SRR4302535.399191/94‑1 (MQ=60)
CGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTG < SRR4302535.3645231/94‑1 (MQ=60)
GTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGG > SRR4302535.4388258/1‑94 (MQ=60)
GTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGG < SRR4302535.3239597/94‑1 (MQ=60)
GTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGG > SRR4302535.1424429/1‑94 (MQ=60)
GTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGG > SRR4302535.3607194/1‑94 (MQ=60)
TTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGA > SRR4302535.2004086/1‑94 (MQ=60)
TTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGAT < SRR4302535.2934095/94‑1 (MQ=60)
TGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATG < SRR4302535.3112555/94‑1 (MQ=60)
TGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATG < SRR4302535.1178551/94‑1 (MQ=60)
TATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGT < SRR4302535.2419400/94‑1 (MQ=60)
TATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGT < SRR4302535.4646154/94‑1 (MQ=60)
GATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGT > SRR4302535.4444460/1‑94 (MQ=60)
ATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCCCGCCGCTGCCTGGATGTT > SRR4302535.1815445/1‑94 (MQ=60)
CTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGC > SRR4302535.4710491/1‑94 (MQ=60)
CTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGC > SRR4302535.4522968/1‑94 (MQ=60)
CTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGC > SRR4302535.1632696/1‑94 (MQ=60)
CTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGC > SRR4302535.4335666/1‑94 (MQ=60)
ACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATC < SRR4302535.3273580/94‑1 (MQ=60)
ACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATC < SRR4302535.1449778/94‑1 (MQ=60)
CAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCT > SRR4302535.1872570/1‑94 (MQ=60)
AACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGG < SRR4302535.415689/94‑1 (MQ=60)
AACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGG < SRR4302535.3039608/94‑1 (MQ=60)
CTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCG > SRR4302535.1327937/1‑94 (MQ=60)
TGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGA > SRR4302535.3435622/1‑94 (MQ=60)
GGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAA > SRR4302535.4408719/1‑94 (MQ=60)
GGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAA < SRR4302535.981123/94‑1 (MQ=60)
GATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAAT > SRR4302535.2711334/1‑94 (MQ=60)
ATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACT < SRR4302535.1436889/94‑1 (MQ=60)
ATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACT < SRR4302535.1703741/94‑1 (MQ=60)
TGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTG > SRR4302535.1708726/1‑94 (MQ=60)
GATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGG < SRR4302535.3516391/94‑1 (MQ=60)
ATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGT < SRR4302535.2677322/94‑1 (MQ=60)
ATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGT > SRR4302535.1016593/1‑94 (MQ=60)
GCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCG < SRR4302535.3614666/94‑1 (MQ=60)
GCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCG < SRR4302535.2661013/94‑1 (MQ=60)
GCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCG < SRR4302535.1826801/94‑1 (MQ=60)
CATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGG > SRR4302535.3606233/1‑94 (MQ=60)
CATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGG > SRR4302535.4573063/1‑94 (MQ=60)
CATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGG < SRR4302535.995301/94‑1 (MQ=60)
CATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGG > SRR4302535.1705553/1‑94 (MQ=60)
CATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGG > SRR4302535.2474449/1‑94 (MQ=60)
ATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGC > SRR4302535.4464774/1‑94 (MQ=60)
GTCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCA > SRR4302535.1441576/1‑94 (MQ=60)
TCATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCAT < SRR4302535.2080314/94‑1 (MQ=60)
CATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATG > SRR4302535.1359423/1‑94 (MQ=60)
CATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATG < SRR4302535.1735545/94‑1 (MQ=60)
CATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATG < SRR4302535.1954213/94‑1 (MQ=60)
CATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATG > SRR4302535.2340086/1‑94 (MQ=60)
ATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGA > SRR4302535.1358172/1‑94 (MQ=60)
ATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGA < SRR4302535.245130/94‑1 (MQ=60)
ATCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGA > SRR4302535.4104901/1‑94 (MQ=60)
TCTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAA < SRR4302535.793800/94‑1 (MQ=60)
CTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAG > SRR4302535.3546612/1‑94 (MQ=60)
CTCAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAG < SRR4302535.3921643/94‑1 (MQ=60)
CAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGAC < SRR4302535.1519486/94‑1 (MQ=60)
CAACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGAC > SRR4302535.1795145/1‑94 (MQ=60)
AACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACG > SRR4302535.3460649/1‑94 (MQ=60)
ACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACcg > SRR4302535.2464088/1‑92 (MQ=60)
ACGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGG > SRR4302535.4619693/1‑94 (MQ=60)
CGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTG > SRR4302535.1165522/1‑94 (MQ=60)
CGATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTG > SRR4302535.3940490/1‑94 (MQ=60)
GATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGG > SRR4302535.1022428/1‑94 (MQ=60)
GATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGG > SRR4302535.1086143/1‑94 (MQ=60)
GATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGG < SRR4302535.1781234/94‑1 (MQ=60)
GATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGGCGGCGGGCATGAAGACGTGG > SRR4302535.4048973/1‑94 (MQ=60)
TTTTTCAGCGAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGG < SRR4302535.3910219/94‑1 (MQ=60)
ATTTTCAGGCAGTGGGGCAGCTGACTGGTTTGACCCCCGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGG < SRR4302535.1724519/94‑1 (MQ=60)
ATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGG > SRR4302535.1858774/1‑94 (MQ=60)
ATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGG > SRR4302535.2923938/1‑94 (MQ=60)
ATTTTCAGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGGCGGCGGGCATGAAGACGTGGG > SRR4302535.679616/1‑94 (MQ=60)
TTTCAGCCGGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGGCGGCGGGCATGAAGACGTGGGGC > SRR4302535.3123242/1‑94 (MQ=60)
AGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCA > SRR4302535.4405561/1‑94 (MQ=60)
AGCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGGCGCCA > SRR4302535.1850255/1‑94 (MQ=60)
GCCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGGCGCCCT > SRR4302535.3966671/1‑94 (MQ=60)
CCAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATG > SRR4302535.407065/1‑94 (MQ=60)
CAGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGT < SRR4302535.398780/94‑1 (MQ=60)
AGTGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTG > SRR4302535.2069184/1‑94 (MQ=60)
TGGGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGC < SRR4302535.342857/94‑1 (MQ=60)
GGGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGC > SRR4302535.4234527/1‑94 (MQ=60)
GGCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCT < SRR4302535.2661784/94‑1 (MQ=60)
GCAGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCTG < SRR4302535.230682/94‑1 (MQ=60)
AGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCTGGA < SRR4302535.4194445/94‑1 (MQ=60)
AGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCTGGA > SRR4302535.1229039/1‑94 (MQ=60)
AGCTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCTGGA < SRR4302535.674687/94‑1 (MQ=60)
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ACCGGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAACTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCTGGA > NC_000913/4083997‑4084182
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
