Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,120,133 |
T→C |
T263A (ACG→GCG) |
ftsN ← |
essential cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,120,133 | 0 | T | C | 100.0%
| 650.7
/ NA
| 208 | T263A (ACG→GCG) | ftsN | essential cell division protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (107/101); total (107/101) |
Only 100 of 229 total aligned reads displayed.
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTC > NC_000913/4120043‑4120220
|
cTTTCCCCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcct < 1:4429332/93‑1 (MQ=255)
cTTTCCCCGGGCAACTGTCCACACGATTCGAGCCATTGTTGGTCGTCATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcct < 1:4288649/93‑1 (MQ=255)
cTTCCACCGGGCCAATGACCACACGATCCCAGCCATTGTTGGTGTTTATTTTCGAGTCAAAGCCTTCGAACTCCAGCTGAGCACGTACCGcct < 2:896613/93‑1 (MQ=255)
tttCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcctc > 1:608901/1‑93 (MQ=255)
tttCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcctc < 1:3789478/93‑1 (MQ=255)
tttCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcctc > 1:3291500/1‑93 (MQ=255)
ttCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCctct < 1:4135047/93‑1 (MQ=255)
cACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGc < 2:4586793/93‑1 (MQ=255)
cACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGCGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGc > 2:2066648/1‑93 (MQ=255)
cccGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGcc < 1:2571249/92‑1 (MQ=255)
aCCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGcc > 1:2288685/1‑93 (MQ=255)
ccGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCt > 1:2056092/1‑93 (MQ=255)
gggCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGt < 1:1156463/93‑1 (MQ=255)
gggCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGt > 2:1177122/1‑93 (MQ=255)
aaTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgc > 1:489746/1‑93 (MQ=255)
aaTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgc > 2:1832864/1‑93 (MQ=255)
aaTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgc > 2:2312365/1‑93 (MQ=255)
aaTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgc > 1:2949936/1‑93 (MQ=255)
aaTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgc > 1:2889392/1‑93 (MQ=255)
aaTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgc > 2:4377617/1‑93 (MQ=255)
aCCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCct > 1:1819417/1‑93 (MQ=255)
ccACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCctc < 1:326779/93‑1 (MQ=255)
acacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTg > 1:3890010/1‑93 (MQ=255)
acacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGACAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTg > 2:2226842/1‑93 (MQ=255)
cacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTga > 2:3009487/1‑93 (MQ=255)
acGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaa < 1:730602/93‑1 (MQ=255)
aTTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacga > 2:2571940/1‑93 (MQ=255)
ttCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaa > 1:2799860/1‑93 (MQ=255)
ttCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaa > 2:1435139/1‑93 (MQ=255)
ttCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaa < 1:3700865/93‑1 (MQ=255)
ttCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaa > 2:1506405/1‑93 (MQ=255)
tCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaac > 1:4629196/1‑93 (MQ=255)
tCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaac < 1:156508/93‑1 (MQ=255)
tCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaac < 2:422106/93‑1 (MQ=255)
ccAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAAcc < 2:137574/93‑1 (MQ=255)
cAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCg > 1:2680739/1‑93 (MQ=255)
aGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGc > 1:2843232/1‑93 (MQ=255)
aGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGc < 1:1956554/93‑1 (MQ=255)
aGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGc < 1:3390974/93‑1 (MQ=255)
gCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCa < 1:1357243/93‑1 (MQ=255)
gCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCa > 1:538574/1‑93 (MQ=255)
gCCATTGTTGGGGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCa > 2:3244882/1‑93 (MQ=255)
aTTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTg > 1:4536911/1‑93 (MQ=255)
tgttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCa > 1:2395920/1‑93 (MQ=255)
gttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAc > 1:3712110/1‑93 (MQ=255)
tttgtggttATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAcc < 1:50553/90‑1 (MQ=255)
gtggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATc < 2:2176211/93‑1 (MQ=255)
gtggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATc < 2:3951244/93‑1 (MQ=255)
gtggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATc < 2:4330821/93‑1 (MQ=255)
gtggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATc < 1:676539/93‑1 (MQ=255)
tggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATcc < 1:2199521/93‑1 (MQ=255)
ggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCa > 1:4111595/1‑93 (MQ=255)
gtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAg > 2:2412512/1‑93 (MQ=255)
gtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAg > 2:536013/1‑93 (MQ=255)
gATTTTCGAGACAAAGCCTTCGAACGCAAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcg < 1:2155776/93‑1 (MQ=255)
aTTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcgg < 1:304251/93‑1 (MQ=255)
aTTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcgg > 1:3109830/1‑93 (MQ=255)
tCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGtt < 1:3511641/93‑1 (MQ=255)
gAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCg > 1:4011301/1‑93 (MQ=255)
gtgaaaGCCTTCGAACGCGAGCTGAGCAGGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTc < 1:128641/90‑1 (MQ=255)
gTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTc > 2:2519741/1‑93 (MQ=255)
gTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTc > 2:1084184/1‑93 (MQ=255)
atCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTc < 2:1985288/92‑1 (MQ=255)
tCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCt > 1:1222209/1‑93 (MQ=255)
cAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtt < 2:3150352/93‑1 (MQ=255)
cAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtt < 1:2612005/93‑1 (MQ=255)
aaaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttt > 2:2952102/1‑93 (MQ=255)
aaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGCTCGTCtctt > 2:4499605/1‑93 (MQ=255)
aGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttttt < 1:3949132/93‑1 (MQ=255)
gCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtttttt < 2:2752543/93‑1 (MQ=255)
ccTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtc > 2:4663016/1‑93 (MQ=255)
cTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtct > 1:1458774/1‑93 (MQ=255)
ttCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtctc > 1:962006/1‑93 (MQ=255)
tCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTcc < 2:733080/93‑1 (MQ=255)
tCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTcc < 2:3195654/93‑1 (MQ=255)
cGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccg < 1:2112708/93‑1 (MQ=255)
aaCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccgcc < 1:4623563/93‑1 (MQ=255)
aCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccgccg > 2:4194697/1‑93 (MQ=255)
cGCCAGCTGAGCACGTTCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGt < 1:1496795/93‑1 (MQ=255)
cGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGt > 2:3557618/1‑93 (MQ=255)
cGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGt < 1:1035883/93‑1 (MQ=255)
gCCAGCTGAGCACGTCCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTc < 2:1285720/93‑1 (MQ=255)
ccAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCg > 2:2821703/1‑93 (MQ=255)
ccAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCg > 2:103731/1‑93 (MQ=255)
cAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCgg < 1:2352857/93‑1 (MQ=255)
cAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCgg > 1:198903/1‑93 (MQ=255)
gCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtt > 2:4205757/1‑93 (MQ=255)
gCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtt < 1:2426698/93‑1 (MQ=255)
tGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtttt > 2:3759249/1‑93 (MQ=255)
tGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtttt > 1:2536077/1‑93 (MQ=255)
tGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtttt > 2:4051358/1‑93 (MQ=255)
tGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtttt < 2:1614314/93‑1 (MQ=255)
tGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtttt > 1:3313042/1‑93 (MQ=255)
gAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTg < 1:4238382/93‑1 (MQ=255)
gCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGgc < 2:3665911/93‑1 (MQ=255)
gCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGgc < 1:1591200/93‑1 (MQ=255)
cGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGcgcg < 1:432254/93‑1 (MQ=255)
gTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGt > 1:1717817/1‑93 (MQ=255)
gTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGt < 2:2950827/93‑1 (MQ=255)
tACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTc < 1:3630855/93‑1 (MQ=255)
|
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTC > NC_000913/4120043‑4120220
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGG > NC_000913/4120040‑4120225
|
TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGC > SRR4302535.1932008/1‑94 (MQ=60)
TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGC < SRR4302535.4320075/94‑1 (MQ=60)
TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGC < SRR4302535.1397899/94‑1 (MQ=60)
CCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCT > SRR4302535.2963706/1‑94 (MQ=60)
CCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCT > SRR4302535.1364138/1‑94 (MQ=60)
CTTTCCCCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC < SRR4302535.4459677/94‑1 (MQ=60)
CTTTCCCCGGGCAACTGTCCACACGATTCGAGCCATTGTTGGTCGTCATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC < SRR4302535.4317986/94‑1 (MQ=60)
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC > SRR4302535.613148/1‑94 (MQ=60)
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC > SRR4302535.3314389/1‑94 (MQ=60)
TTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCT < SRR4302535.2076824/94‑1 (MQ=60)
TTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCT < SRR4302535.3815614/94‑1 (MQ=60)
TTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCT < SRR4302535.3755167/94‑1 (MQ=60)
TTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTG < SRR4302535.4163362/94‑1 (MQ=60)
CACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCC > SRR4302535.3306448/1‑94 (MQ=60)
CACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCC > SRR4302535.2305034/1‑94 (MQ=60)
CCCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCT < SRR4302535.2589734/94‑1 (MQ=60)
ACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCT > SRR4302535.2070902/1‑94 (MQ=60)
ACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCT > SRR4302535.3431621/1‑94 (MQ=60)
CGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGT > SRR4302535.637716/1‑94 (MQ=60)
GGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTT < SRR4302535.1164724/94‑1 (MQ=60)
CGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTT < SRR4302535.295784/94‑1 (MQ=60)
GGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTC > SRR4302535.1074155/1‑94 (MQ=60)
GCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCC < SRR4302535.4037804/94‑1 (MQ=60)
GCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCC < SRR4302535.4149602/94‑1 (MQ=60)
GCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCC < SRR4302535.501946/94‑1 (MQ=60)
GCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCC < SRR4302535.52098/94‑1 (MQ=60)
CCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCG > SRR4302535.1275344/1‑94 (MQ=60)
CCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCG > SRR4302535.2884064/1‑94 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302535.2970662/1‑94 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302535.4227743/1‑94 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302535.3260875/1‑94 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC < SRR4302535.669427/94‑1 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302535.493185/1‑94 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302535.2909833/1‑94 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302535.4110822/1‑94 (MQ=60)
ATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGC < SRR4302535.4656878/94‑1 (MQ=60)
ATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGC < SRR4302535.2166124/94‑1 (MQ=60)
GACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT > SRR4302535.1832563/1‑94 (MQ=60)
GACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT > SRR4302535.3336090/1‑94 (MQ=60)
CCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCT < SRR4302535.329044/94‑1 (MQ=60)
CCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCT < SRR4302535.4520621/94‑1 (MQ=60)
CACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG > SRR4302535.3916681/1‑94 (MQ=60)
CACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG > SRR4302535.3126386/1‑94 (MQ=60)
ACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGA > SRR4302535.2303166/1‑94 (MQ=60)
ACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAAC < SRR4302535.576167/94‑1 (MQ=60)
ACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAAC < SRR4302535.735734/94‑1 (MQ=60)
CGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACG < SRR4302535.2352441/94‑1 (MQ=60)
GATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGA > SRR4302535.1519058/1‑94 (MQ=60)
ATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAA > SRR4302535.2819779/1‑94 (MQ=60)
ATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAA < SRR4302535.3912152/94‑1 (MQ=60)
TTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAAC < SRR4302535.3726498/94‑1 (MQ=60)
TTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAAC > SRR4302535.4660611/1‑94 (MQ=60)
TCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACC < SRR4302535.157615/94‑1 (MQ=60)
TCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACC < SRR4302535.4319830/94‑1 (MQ=60)
TCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACC > SRR4302535.3727401/1‑94 (MQ=60)
CCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCG < SRR4302535.4292908/94‑1 (MQ=60)
CCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCG > SRR4302535.1886662/1‑94 (MQ=60)
CCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCG > SRR4302535.2699918/1‑94 (MQ=60)
CAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGC > SRR4302535.2863393/1‑94 (MQ=60)
AGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCA < SRR4302535.1970634/94‑1 (MQ=60)
AGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCA < SRR4302535.726515/94‑1 (MQ=60)
AGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCA < SRR4302535.3414564/94‑1 (MQ=60)
AGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCA > SRR4302535.542334/1‑94 (MQ=60)
GCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAC < SRR4302535.1366952/94‑1 (MQ=60)
CCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACT < SRR4302535.3009681/94‑1 (MQ=60)
CCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACT < SRR4302535.2727212/94‑1 (MQ=60)
CATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTG > SRR4302535.4567948/1‑94 (MQ=60)
CATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTG > SRR4302535.1531439/1‑94 (MQ=60)
CATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTG < SRR4302535.4466878/94‑1 (MQ=60)
ATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGC < SRR4302535.1949180/94‑1 (MQ=60)
ATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGC > SRR4302535.1499753/1‑94 (MQ=60)
TTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCA > SRR4302535.2413140/1‑94 (MQ=60)
TGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAC > SRR4302535.3534779/1‑94 (MQ=60)
TGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAC > SRR4302535.3737827/1‑94 (MQ=60)
GTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACC < SRR4302535.3666218/94‑1 (MQ=60)
TTTGTGGTTATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCA < SRR4302535.50927/94‑1 (MQ=60)
TGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCAT < SRR4302535.938920/94‑1 (MQ=60)
GTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCC < SRR4302535.681267/94‑1 (MQ=60)
TGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGNACGAACCGCACTGNANCATNCA > SRR4302535.1310491/1‑94 (MQ=60)
TGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCA < SRR4302535.2215196/94‑1 (MQ=60)
TGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCA > SRR4302535.4139737/1‑94 (MQ=60)
TGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCG > SRR4302535.4599285/1‑94 (MQ=60)
TGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCG > SRR4302535.1184242/1‑94 (MQ=60)
GATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGG > SRR4302535.3131480/1‑94 (MQ=60)
GATTTTCGAGACAAAGCCTTCGAACGCAAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGG < SRR4302535.2171267/94‑1 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC > SRR4302535.3736337/1‑94 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC > SRR4302535.467317/1‑94 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC < SRR4302535.971836/94‑1 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC > SRR4302535.136957/1‑94 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC > SRR4302535.1618709/1‑94 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC < SRR4302535.306363/94‑1 (MQ=60)
TCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTC < SRR4302535.3536040/94‑1 (MQ=60)
TCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTC < SRR4302535.445071/94‑1 (MQ=60)
CGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCG > SRR4302535.4038743/1‑94 (MQ=60)
AGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTC < SRR4302535.3294715/94‑1 (MQ=60)
GTGAAAGCCTTCGAACGCGAGCTGAGCAGGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCT < SRR4302535.129548/94‑1 (MQ=60)
GTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCT > SRR4302535.1230961/1‑94 (MQ=60)
TCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTT < SRR4302535.3581154/94‑1 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT > SRR4302535.2683860/1‑94 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT < SRR4302535.2630741/94‑1 (MQ=60)
AAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTT < SRR4302535.2010518/94‑1 (MQ=60)
AGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTT < SRR4302535.3976096/94‑1 (MQ=60)
AGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTT > SRR4302535.3345074/1‑94 (MQ=60)
AGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTT < SRR4302535.1577343/94‑1 (MQ=60)
AGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTT < SRR4302535.4719521/94‑1 (MQ=60)
CCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTC < SRR4302535.1974412/94‑1 (MQ=60)
CCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCT > SRR4302535.1469223/1‑94 (MQ=60)
CCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCT > SRR4302535.4232263/1‑94 (MQ=60)
CCTCCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCT < SRR4302535.2091430/94‑1 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC > SRR4302535.968841/1‑94 (MQ=60)
TCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCG < SRR4302535.2556422/94‑1 (MQ=60)
CGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGC < SRR4302535.2127956/94‑1 (MQ=60)
CGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGC > SRR4302535.2851480/1‑94 (MQ=60)
AACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCG < SRR4302535.4654964/94‑1 (MQ=60)
ACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCCCCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGT < SRR4302535.2760730/94‑1 (MQ=60)
CGCCAGCTGAGCACGTTCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTC < SRR4302535.1507559/94‑1 (MQ=60)
CGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTC < SRR4302535.1043240/94‑1 (MQ=60)
CCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGG > SRR4302535.200267/1‑94 (MQ=60)
CCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGG < SRR4302535.1811927/94‑1 (MQ=60)
CAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGT < SRR4302535.2369726/94‑1 (MQ=60)
AGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTT > SRR4302535.2213202/1‑94 (MQ=60)
AGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTT < SRR4302535.2427230/94‑1 (MQ=60)
GCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTT < SRR4302535.2444184/94‑1 (MQ=60)
CTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTT > SRR4302535.2514427/1‑94 (MQ=60)
CTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTT > SRR4302535.3336094/1‑94 (MQ=60)
CTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTT > SRR4302535.2554343/1‑94 (MQ=60)
TGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTG > SRR4302535.398930/1‑94 (MQ=60)
TGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTG < SRR4302535.3973148/94‑1 (MQ=60)
GAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGG < SRR4302535.4267400/94‑1 (MQ=60)
GCACGTCCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCG < SRR4302535.2614672/94‑1 (MQ=60)
GCACGTCCCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCG < SRR4302535.2337191/94‑1 (MQ=60)
GCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCG < SRR4302535.1602680/94‑1 (MQ=60)
GCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCG < SRR4302535.2392799/94‑1 (MQ=60)
CACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGC > SRR4302535.2537270/1‑94 (MQ=60)
CGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGT > SRR4302535.1730247/1‑94 (MQ=60)
CGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGT < SRR4302535.435263/94‑1 (MQ=60)
TACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCA < SRR4302535.3656026/94‑1 (MQ=60)
CGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCACACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCG < SRR4302535.3117347/94‑1 (MQ=60)
GCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGG > SRR4302535.1250123/1‑94 (MQ=60)
GCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGG < SRR4302535.2393914/94‑1 (MQ=60)
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TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGG > NC_000913/4120040‑4120225
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
