Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,185,057 |
C→T |
D710D (GAC→GAT) |
rpoC → |
RNA polymerase beta prime subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,185,057 | 0 | C | T | 100.0%
| 863.6
/ NA
| 237 | D710D (GAC→GAT) | rpoC | RNA polymerase beta prime subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (118/119); total (118/119) |
Only 100 of 246 total aligned reads displayed.
CAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCT > NC_000913/4184967‑4185146
|
caaAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGTGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATgg > 2:449659/1‑93 (MQ=255)
caaAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATgg < 2:2614268/93‑1 (MQ=255)
aaaGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAGCCGTGATTAACTGTGATGGt < 2:4584369/93‑1 (MQ=255)
aaaGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAAGCGTGATTAACCGTGATGGt > 1:4437660/1‑93 (MQ=255)
aaaGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGt < 2:444468/93‑1 (MQ=255)
aaaGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGt < 1:1471013/93‑1 (MQ=255)
aaaGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGt > 2:2295945/1‑93 (MQ=255)
gTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAg < 1:3804673/93‑1 (MQ=255)
ttATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAgg > 1:1959506/1‑93 (MQ=255)
ttATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAgg > 1:3713995/1‑93 (MQ=255)
tATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGa > 2:1435606/1‑93 (MQ=255)
tATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGa < 1:462584/93‑1 (MQ=255)
tCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAag < 2:4381706/93‑1 (MQ=255)
atatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAgaga < 2:3451386/93‑1 (MQ=255)
atatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAgaga > 2:2215991/1‑93 (MQ=255)
tatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGCAGAGaa > 2:2497451/1‑93 (MQ=255)
tatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGaa < 1:1570866/93‑1 (MQ=255)
tatCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGaa > 1:4186664/1‑93 (MQ=255)
atCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAg < 1:3086932/93‑1 (MQ=255)
atCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAg < 2:1019080/93‑1 (MQ=255)
atCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAg > 1:4368476/1‑93 (MQ=255)
tCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGc > 2:1977568/1‑93 (MQ=255)
tCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGc < 2:2701959/93‑1 (MQ=255)
cTGGCCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGcg < 2:2826197/93‑2 (MQ=255)
tGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGcgg > 1:2028358/1‑91 (MQ=255)
gggCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCggg > 2:1268543/1‑93 (MQ=255)
gggCTGCGGCGAACGATCGTGTATCCAAACCGATGATGCATAACCGGCAAACTGAACCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCggg < 2:857019/93‑1 (MQ=255)
ggCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGt < 2:2938344/93‑1 (MQ=255)
ggCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGt < 2:3908098/93‑1 (MQ=255)
ggCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGt < 1:641603/93‑1 (MQ=255)
cggcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCt < 1:4098453/93‑1 (MQ=255)
ggcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGGTTCAtt > 1:4558731/1‑93 (MQ=255)
gcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTc < 1:3325932/93‑1 (MQ=255)
gcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTc < 2:4029647/93‑1 (MQ=255)
gcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTc < 2:4067793/93‑1 (MQ=255)
aaCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAc > 1:1296830/1‑93 (MQ=255)
aCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACa < 1:3940857/93‑1 (MQ=255)
aCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACa < 2:1149974/93‑1 (MQ=255)
aCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACa < 1:1526836/93‑1 (MQ=255)
cGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAg > 1:4050246/1‑93 (MQ=255)
gATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGc < 1:1613151/93‑1 (MQ=255)
aTCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAAGCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCa > 1:2511534/1‑93 (MQ=255)
aTCGTGTATCCAAAGCGATGATGGATAACATGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGCGAAGCGGGGTGCGTTCGACAGCa > 2:1604986/1‑93 (MQ=255)
gtgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCt > 2:131129/1‑93 (MQ=255)
tgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCtc > 2:2084150/1‑92 (MQ=255)
gtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAc > 1:1693962/1‑93 (MQ=255)
tATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACa < 1:4495481/93‑1 (MQ=255)
tATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACa < 1:3511315/93‑1 (MQ=255)
tATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACa > 2:542344/1‑93 (MQ=255)
ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga < 2:700228/93‑1 (MQ=255)
ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga < 1:3878243/93‑1 (MQ=255)
ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga < 1:1056800/93‑1 (MQ=255)
ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga < 1:2854407/93‑1 (MQ=255)
ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga < 1:4130968/93‑1 (MQ=255)
ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga < 1:3470481/93‑1 (MQ=255)
cAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatgat < 2:2178989/93‑1 (MQ=255)
aaaGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatgatg > 2:601378/1‑93 (MQ=255)
aaaGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatgatg > 2:2746125/1‑93 (MQ=255)
aaaGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatgatg > 2:2694796/1‑93 (MQ=255)
gCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGcc < 2:3442515/93‑1 (MQ=255)
cGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCg < 2:1879169/93‑1 (MQ=255)
gatgatGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGa < 2:3835325/93‑1 (MQ=255)
gatgatGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGa > 1:2107632/1‑93 (MQ=255)
gatgatGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGa > 2:4131462/1‑93 (MQ=255)
gatgatGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGGTTCCTTCAACAGCATCTACATGATGGCCGa > 2:3640657/1‑93 (MQ=255)
atgatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGAc > 2:4211252/1‑93 (MQ=255)
atgatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGAc > 1:3227471/1‑93 (MQ=255)
atgatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGAc < 1:3390477/93‑1 (MQ=255)
tgatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACt > 2:365045/1‑93 (MQ=255)
tgatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACt > 1:3761037/1‑93 (MQ=255)
tgatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACt > 2:1518831/1‑93 (MQ=255)
gatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGGTTCCTTCAACAGCATCTACATGATGGGCGACTc > 1:904729/1‑93 (MQ=255)
tgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCg < 2:1909840/93‑1 (MQ=255)
gATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGt > 1:2380140/1‑93 (MQ=255)
tAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTgc < 2:1948854/93‑1 (MQ=255)
aaCCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTgcg > 1:2869944/1‑93 (MQ=255)
aCCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTgcgc < 2:3356897/93‑1 (MQ=255)
aCCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTgcgc > 2:2760390/1‑93 (MQ=255)
ccTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGcgcg > 2:1658802/1‑93 (MQ=255)
ctcaaaaCGGAAAGGGTGATTAACGGGGAGGGTCGGGAAGAGAAGCGGTTTTCCTTAAACAGCATCTACATGATGGCCGACTCCGGTGCGCGt < 2:1222176/89‑1 (MQ=255)
tGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGCGCGCGTg > 1:1226067/1‑93 (MQ=255)
gCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTgg > 2:2383104/1‑93 (MQ=255)
gCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGCGCGCGTgg > 1:50029/1‑93 (MQ=255)
cAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGt < 2:3033427/93‑1 (MQ=255)
cAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGt < 2:322767/93‑1 (MQ=255)
accggAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTc < 2:4118859/89‑1 (MQ=255)
aaCTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTc < 2:784086/93‑1 (MQ=255)
aCTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGCTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCt < 2:65042/93‑1 (MQ=255)
cTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTg > 2:3867055/1‑93 (MQ=255)
tGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGTTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGc < 1:2690763/93‑1 (MQ=255)
tGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGc > 1:2277587/1‑93 (MQ=255)
aCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACGCCGTTGCGCGTGGGTCTGTggaa > 2:1094360/1‑91 (MQ=255)
ccGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGcac < 1:1167490/93‑1 (MQ=255)
ccGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGcac < 1:4327669/93‑1 (MQ=255)
tGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGa < 2:1467609/93‑1 (MQ=255)
aTTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGAtt > 1:580353/1‑93 (MQ=255)
aTTAACCGTGATGGTCAGGAAGAGAAGCGGGGTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGAtt > 2:1775846/1‑93 (MQ=255)
ttAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTc < 2:1743264/93‑1 (MQ=255)
aaCCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGt > 1:833526/1‑93 (MQ=255)
tGATGGTCAGGCAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCt > 2:3929573/1‑93 (MQ=255)
|
CAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCT > NC_000913/4184967‑4185146
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT > NC_000913/4184964‑4185150
|
CAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCGAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGAT > SRR4302535.3063828/1‑94 (MQ=60)
AACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATG < SRR4302535.2628641/94‑1 (MQ=60)
AACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATG > SRR4302535.3113440/1‑94 (MQ=60)
AACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATG > SRR4302535.3173428/1‑94 (MQ=60)
AACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATG < SRR4302535.3662069/94‑1 (MQ=60)
ACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGG < SRR4302535.4660006/94‑1 (MQ=60)
CAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAAGCGTGATTAACCGTGATGGT > SRR4302535.4468077/1‑94 (MQ=60)
CAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGT < SRR4302535.4109398/94‑1 (MQ=60)
AAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTC < SRR4302535.1481547/94‑1 (MQ=60)
AGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAG < SRR4302535.978073/94‑1 (MQ=60)
GTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGG < SRR4302535.3830899/94‑1 (MQ=60)
GTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGG > SRR4302535.3739726/1‑94 (MQ=60)
GTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGG > SRR4302535.1973639/1‑94 (MQ=60)
TTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGA > SRR4302535.4177211/1‑94 (MQ=60)
TATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAA < SRR4302535.465818/94‑1 (MQ=60)
ATAGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAG < SRR4302535.4218692/94‑1 (MQ=60)
CGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAG > SRR4302535.336363/1‑94 (MQ=60)
GATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGA < SRR4302535.1468041/94‑1 (MQ=60)
ATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAA > SRR4302535.4215316/1‑94 (MQ=60)
ATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAA > SRR4302535.4421988/1‑94 (MQ=60)
TATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAG < SRR4302535.1582206/94‑1 (MQ=60)
TATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAG > SRR4302535.4398373/1‑94 (MQ=60)
ATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGC < SRR4302535.1592678/94‑1 (MQ=60)
ATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGC < SRR4302535.3108432/94‑1 (MQ=60)
TCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAACCTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCG > SRR4302535.3415344/1‑94 (MQ=60)
CTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAACCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGG < SRR4302535.3511164/94‑1 (MQ=60)
CTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGG < SRR4302535.3284334/94‑1 (MQ=60)
CTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGG < SRR4302535.4610123/94‑1 (MQ=60)
CTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGG > SRR4302535.2042981/1‑94 (MQ=60)
CTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGG > SRR4302535.3856361/1‑94 (MQ=60)
GGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGT < SRR4302535.2740389/94‑1 (MQ=60)
GGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTT < SRR4302535.646083/94‑1 (MQ=60)
GCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTT < SRR4302535.3954821/94‑1 (MQ=60)
TGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCC < SRR4302535.4686466/94‑1 (MQ=60)
TGCGGCGAACGACCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCC > SRR4302535.4371838/1‑94 (MQ=60)
GCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCT < SRR4302535.636662/94‑1 (MQ=60)
CGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCggggttcatt > SRR4302535.4589855/1‑84 (MQ=60)
CGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTT < SRR4302535.4126510/94‑1 (MQ=60)
CGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTT < SRR4302535.1867747/94‑1 (MQ=60)
CGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTT < SRR4302535.3546417/94‑1 (MQ=60)
GGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGCTTCCTTC > SRR4302535.749351/1‑94 (MQ=60)
GCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCA < SRR4302535.3349076/94‑1 (MQ=60)
CGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGGTTCCTTTAA > SRR4302535.386582/1‑94 (MQ=60)
GAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAC > SRR4302535.1306082/1‑94 (MQ=60)
AACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACA > SRR4302535.155294/1‑94 (MQ=60)
ACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAG < SRR4302535.1537837/94‑1 (MQ=60)
ACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAG < SRR4302535.3967759/94‑1 (MQ=60)
ACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAG > SRR4302535.4077974/1‑94 (MQ=60)
ACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAG > SRR4302535.450352/1‑94 (MQ=60)
CGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGC < SRR4302535.2477927/94‑1 (MQ=60)
GATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAAGCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCA > SRR4302535.2529636/1‑94 (MQ=60)
GATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCA < SRR4302535.1624778/94‑1 (MQ=60)
ATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCAT < SRR4302535.4553768/94‑1 (MQ=60)
CGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCT < SRR4302535.2903685/94‑1 (MQ=60)
CGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGAGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCT > SRR4302535.4456964/1‑94 (MQ=60)
GTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTA < SRR4302535.2884774/94‑1 (MQ=60)
TGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAC > SRR4302535.1706212/1‑94 (MQ=60)
GTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACA < SRR4302535.2540557/94‑1 (MQ=60)
TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT < SRR4302535.4526339/94‑1 (MQ=60)
TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT < SRR4302535.2778242/94‑1 (MQ=60)
TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT > SRR4302535.3753560/1‑94 (MQ=60)
TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT < SRR4302535.3535713/94‑1 (MQ=60)
ATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATG > SRR4302535.2329492/1‑94 (MQ=60)
TCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGA > SRR4302535.4150580/1‑94 (MQ=60)
CCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGAT < SRR4302535.309287/94‑1 (MQ=60)
CCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGAT < SRR4302535.3494597/94‑1 (MQ=60)
CCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGAT < SRR4302535.1064312/94‑1 (MQ=60)
CCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGAT < SRR4302535.2874626/94‑1 (MQ=60)
CCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGAT < SRR4302535.3904873/94‑1 (MQ=60)
CCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGAT < SRR4302535.4159232/94‑1 (MQ=60)
CAAAGCGATGATGGATATCCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAATAGAAGCGGGTTTCCTTCAACAGCATCTACATGATG < SRR4302535.1534651/94‑1 (MQ=60)
CAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATG < SRR4302535.2459635/94‑1 (MQ=60)
AAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGC < SRR4302535.197936/94‑1 (MQ=60)
CGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGA > SRR4302535.2122834/1‑94 (MQ=60)
GATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGAC > SRR4302535.3249840/1‑94 (MQ=60)
ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT < SRR4302535.3414065/94‑1 (MQ=60)
ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT > SRR4302535.3787027/1‑94 (MQ=60)
ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATATACATGATGGCCGACT > SRR4302535.4140813/1‑94 (MQ=60)
TGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGGCGACTC > SRR4302535.559441/1‑94 (MQ=60)
TGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGGTTCCTTCAACAGCATCTACATGATGGGCGACTC > SRR4302535.911150/1‑94 (MQ=60)
TGATGGATAACCTGCAAACTGAAACCGGGATTAACCGTGATGGTCAGGAGGAGAAGCGGGATTCCTTCAACAGCATCTACATGATGGCCGACTC > SRR4302535.2235513/1‑94 (MQ=60)
GATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCC > SRR4302535.2116441/1‑94 (MQ=60)
GGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGT > SRR4302535.2091902/1‑94 (MQ=60)
GGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGT > SRR4302535.2397233/1‑94 (MQ=60)
GATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTG < SRR4302535.936027/94‑1 (MQ=60)
GATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTG > SRR4302535.4537117/1‑94 (MQ=60)
TAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCG > SRR4302535.2890273/1‑94 (MQ=60)
TAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCG < SRR4302535.3561013/94‑1 (MQ=60)
CTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTG > SRR4302535.402654/1‑94 (MQ=60)
CTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGCGCGCGTG > SRR4302535.1234837/1‑94 (MQ=60)
TGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGG > SRR4302535.1271810/1‑94 (MQ=60)
TGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGCGCGCGTGG > SRR4302535.50400/1‑94 (MQ=60)
CAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTT > SRR4302535.1652067/1‑94 (MQ=60)
CAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTT > SRR4302535.893849/1‑94 (MQ=60)
CAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTT > SRR4302535.4332966/1‑94 (MQ=60)
AAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTC > SRR4302535.1226434/1‑94 (MQ=60)
AACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCT < SRR4302535.725029/94‑1 (MQ=60)
CTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGC > SRR4302535.2293854/1‑94 (MQ=60)
TGAACCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCG < SRR4302535.150894/94‑1 (MQ=60)
TGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGTTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCG < SRR4302535.2709994/94‑1 (MQ=60)
TGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCG < SRR4302535.284811/94‑1 (MQ=60)
CCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACA < SRR4302535.1175824/94‑1 (MQ=60)
CCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACA < SRR4302535.4357263/94‑1 (MQ=60)
CCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACA > SRR4302535.3175140/1‑94 (MQ=60)
GTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGA > SRR4302535.3818550/1‑94 (MQ=60)
TGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGAT > SRR4302535.1753264/1‑94 (MQ=60)
GATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATT > SRR4302535.584433/1‑94 (MQ=60)
ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTC > SRR4302535.1593983/1‑94 (MQ=60)
TTAACTGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCG < SRR4302535.347453/94‑1 (MQ=60)
TAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT > SRR4302535.839367/1‑94 (MQ=60)
CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG > SRR4302535.1102118/1‑94 (MQ=60)
GTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCT > SRR4302535.567895/1‑94 (MQ=60)
GTGATGGTCAGGAAGAGAAGCGGGTTTCCGTCAACAGCAGCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCT < SRR4302535.402753/94‑1 (MQ=60)
TGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTT < SRR4302535.3345646/94‑1 (MQ=60)
TGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT < SRR4302535.246291/94‑1 (MQ=60)
TGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT > SRR4302535.569037/1‑94 (MQ=60)
TGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT < SRR4302535.1210560/94‑1 (MQ=60)
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CAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT > NC_000913/4184964‑4185150
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
