Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,205,033 |
T→C |
A26A (GCA→GCG) |
purH ← |
phosphoribosylaminoimidazolecarboxamideformyltra nsferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,205,033 | 0 | T | C | 100.0%
| 705.7
/ NA
| 221 | A26A (GCA→GCG) | purH | phosphoribosylaminoimidazolecarboxamideformyltra nsferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (119/102); total (119/102) |
Only 100 of 234 total aligned reads displayed.
ATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGTGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCT > NC_000913/4204943‑4205122
|
tCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGcc < 1:4485569/93‑1 (MQ=255)
tCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGcc > 2:4031644/1‑93 (MQ=255)
tCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGcc > 1:852932/1‑93 (MQ=255)
tgtaaaCTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCt < 1:2107419/90‑1 (MQ=255)
cGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCt < 1:610501/93‑1 (MQ=255)
ggAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTg > 1:3885450/1‑93 (MQ=255)
ggAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTg < 2:2355347/93‑1 (MQ=255)
gAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTgg > 2:2119161/1‑93 (MQ=255)
aaaCTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTggg > 2:1460335/1‑93 (MQ=255)
aaCTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGc > 2:1268070/1‑93 (MQ=255)
aCTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCg > 1:2946323/1‑93 (MQ=255)
aCTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCg > 1:2614576/1‑93 (MQ=255)
aCTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCg > 1:4597780/1‑93 (MQ=255)
cTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGa > 1:708147/1‑93 (MQ=255)
cTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGa > 1:1198891/1‑93 (MQ=255)
ttCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGaa > 2:2725741/1‑93 (MQ=255)
ttCGGTTACCGGCAGACCTTTTTCTGCTAACAGACCGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGac > 1:3422895/1‑92 (MQ=255)
cGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAAtt > 1:4291530/1‑93 (MQ=255)
ggTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTc > 2:3956331/1‑93 (MQ=255)
ttACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTcga > 2:1997096/1‑93 (MQ=255)
ttACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTcga < 2:5649/93‑1 (MQ=255)
ttACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTcga > 1:3785986/1‑93 (MQ=255)
ccGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACCCCGCGTGCGGAAAGCCCCTGGGCGAATTccacga < 2:2249533/93‑1 (MQ=255)
ccGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTcgacga < 1:3778629/93‑1 (MQ=255)
ccGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTcgacga < 2:174917/93‑1 (MQ=255)
cGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGAt < 1:922754/93‑1 (MQ=255)
ggCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATa > 1:1034007/1‑93 (MQ=255)
gCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATAc > 1:2549136/1‑93 (MQ=255)
gCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATAc < 1:1965188/93‑1 (MQ=255)
gCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATAc < 1:1683333/93‑1 (MQ=255)
cAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATAcg > 1:1975935/1‑92 (MQ=255)
aGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCg > 1:3256236/1‑93 (MQ=255)
gACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCgg > 1:4218585/1‑93 (MQ=255)
gACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCgg > 2:959960/1‑93 (MQ=255)
gACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCgg > 1:1617563/1‑93 (MQ=255)
ccTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCt > 2:739454/1‑93 (MQ=255)
cTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCtt < 2:4255643/93‑1 (MQ=255)
cTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCtt > 1:2380511/1‑93 (MQ=255)
tttCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGt < 1:4149387/93‑1 (MQ=255)
tttCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGt < 2:256836/93‑1 (MQ=255)
tGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGa < 1:2425269/93‑1 (MQ=255)
tAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAac < 2:4139772/93‑1 (MQ=255)
tAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAac > 1:1342001/1‑93 (MQ=255)
tAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAac < 1:4307133/93‑1 (MQ=255)
tAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAac > 2:1898079/1‑93 (MQ=255)
aaCAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAaca > 1:3819359/1‑93 (MQ=255)
aCAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAacac > 1:2711732/1‑93 (MQ=255)
cAGACGGGCAGTGCCCCCCGGAGACAGCAGCCCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACt < 1:151058/93‑1 (MQ=255)
aGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTg > 2:2797458/1‑93 (MQ=255)
aGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTg > 2:1703447/1‑93 (MQ=255)
gACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGa > 2:4388975/1‑93 (MQ=255)
cGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGc < 2:2900693/93‑1 (MQ=255)
cGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGc < 2:320234/93‑1 (MQ=255)
gCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCaga < 2:3239265/93‑1 (MQ=255)
gCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCaga > 1:1780049/1‑93 (MQ=255)
gCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCaga < 1:3345701/93‑1 (MQ=255)
gTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAgcg < 2:3809495/93‑1 (MQ=255)
gTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAgcg > 1:4085535/1‑93 (MQ=255)
cccccTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCgcgg < 1:2321279/93‑1 (MQ=255)
ccccTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGACTTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCgcggc > 1:2010060/1‑93 (MQ=255)
ccccTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCgcggc > 2:2551785/1‑93 (MQ=255)
ccccTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCgcggc > 2:3309225/1‑93 (MQ=255)
ccccTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCgcggc > 1:1327261/1‑93 (MQ=255)
ccccTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCgcggc < 2:1844290/93‑1 (MQ=255)
ccTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGcggcgg > 2:392612/1‑93 (MQ=255)
ccTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGcggcgg > 2:4449269/1‑93 (MQ=255)
tGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGAc > 1:4532844/1‑93 (MQ=255)
tAGACAGCAGCTCCACACCTCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTg < 2:4098205/93‑1 (MQ=255)
tAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTg > 1:774542/1‑93 (MQ=255)
tAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTg > 2:842730/1‑93 (MQ=255)
gACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGga > 1:2899554/1‑93 (MQ=255)
aCAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGgac < 1:3482423/93‑1 (MQ=255)
agcagcTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGgacga < 1:2678398/93‑1 (MQ=255)
agcTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGgacgactt < 2:4617200/93‑3 (MQ=255)
agcTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACgt < 2:2201471/93‑1 (MQ=255)
agcTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACgt < 2:3438209/93‑1 (MQ=255)
gcTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACgtt > 2:3690727/1‑93 (MQ=255)
tCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACgttgt > 1:50051/1‑93 (MQ=255)
tCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACgttgt < 1:4623302/93‑1 (MQ=255)
tCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACgttgt > 1:1944264/1‑93 (MQ=255)
ccACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACgttgtt < 2:2996162/93‑1 (MQ=255)
cacaCCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTTTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGttgttg > 1:385792/1‑93 (MQ=255)
cacaCCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGttgttg > 1:657192/1‑93 (MQ=255)
ccGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATg < 1:4368832/93‑1 (MQ=255)
ccGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATg < 1:1942565/93‑1 (MQ=255)
cgcgTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATgg < 2:3295912/93‑1 (MQ=255)
cgcgTGCGGAAAGCGCCCGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATgg < 2:1338949/93‑1 (MQ=255)
gcgTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGGAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGt < 2:312507/93‑1 (MQ=255)
gcgTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGt > 2:3512419/1‑93 (MQ=255)
cgTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTa < 2:2541221/93‑1 (MQ=255)
cgTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTa < 2:449650/93‑1 (MQ=255)
tGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTaaa > 1:2973042/1‑93 (MQ=255)
tGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTaaa > 2:4531483/1‑93 (MQ=255)
tGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTaaa < 1:3679575/93‑1 (MQ=255)
tGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTaaa > 1:285430/1‑93 (MQ=255)
gCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAAt < 1:3486254/93‑1 (MQ=255)
gCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAAt > 2:935220/1‑93 (MQ=255)
cGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATc < 1:3152867/93‑1 (MQ=255)
cgAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATcc < 1:3967773/92‑1 (MQ=255)
gAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATccc > 1:1159005/1‑93 (MQ=255)
|
ATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGTGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCT > NC_000913/4204943‑4205122
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTAATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGTGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCTGGAT > NC_000913/4204940‑4205126
|
GTAATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGC > SRR4302535.1368996/1‑94 (MQ=60)
GTAATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGC < SRR4302535.1333339/94‑1 (MQ=60)
TAATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCG < SRR4302535.3039367/94‑1 (MQ=60)
AATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGC > SRR4302535.3847597/1‑94 (MQ=60)
AATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGC > SRR4302535.4288614/1‑94 (MQ=60)
ATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCC > SRR4302535.858938/1‑94 (MQ=60)
ATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCC > SRR4302535.1922599/1‑94 (MQ=60)
ATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCC > SRR4302535.3911070/1‑94 (MQ=60)
TCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCT < SRR4302535.4516361/94‑1 (MQ=60)
TCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCT > SRR4302535.195705/1‑94 (MQ=60)
TCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCT < SRR4302535.3204631/94‑1 (MQ=60)
tgtAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTG < SRR4302535.2122621/91‑1 (MQ=60)
CGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTG < SRR4302535.3345995/94‑1 (MQ=60)
CGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTG < SRR4302535.2122620/94‑1 (MQ=60)
CGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTG < SRR4302535.614754/94‑1 (MQ=60)
CGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTG > SRR4302535.3912101/1‑94 (MQ=60)
CGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTG > SRR4302535.4045587/1‑94 (MQ=60)
GGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGG > SRR4302535.3447427/1‑94 (MQ=60)
GGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGG > SRR4302535.3268053/1‑94 (MQ=60)
GGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGG > SRR4302535.711687/1‑94 (MQ=60)
GAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGG < SRR4302535.118493/94‑1 (MQ=60)
GAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGG > SRR4302535.4543437/1‑94 (MQ=60)
AAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGC < SRR4302535.2811253/94‑1 (MQ=60)
AACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCG > SRR4302535.4629057/1‑94 (MQ=60)
AACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCG > SRR4302535.2633326/1‑94 (MQ=60)
AACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCG > SRR4302535.2967028/1‑94 (MQ=60)
AACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCG < SRR4302535.821302/94‑1 (MQ=60)
ACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGA > SRR4302535.1207481/1‑94 (MQ=60)
ACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGA > SRR4302535.713116/1‑94 (MQ=60)
ACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGCGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGA > SRR4302535.2535695/1‑94 (MQ=60)
CTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAA > SRR4302535.2721991/1‑94 (MQ=60)
CTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACCGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAC > SRR4302535.3446700/1‑94 (MQ=60)
TTCGTATACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCGCCACACCGCGTGCGGAAAGCGCCTGGGCGAAT < SRR4302535.1115918/94‑1 (MQ=60)
TTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAAT > SRR4302535.1628855/1‑94 (MQ=60)
TCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATT > SRR4302535.4320901/1‑94 (MQ=60)
CGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGGCCCCTGTAGACAGCAGCTGCACACCGCGTGGGGAAAGCGCGTGGGCGAATTG > SRR4302535.3858237/1‑94 (MQ=60)
GGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCG > SRR4302535.893266/1‑94 (MQ=60)
GGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCG > SRR4302535.3074927/1‑94 (MQ=60)
GTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGA > SRR4302535.3812102/1‑94 (MQ=60)
CCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGAT < SRR4302535.3804672/94‑1 (MQ=60)
CCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGAT < SRR4302535.1665305/94‑1 (MQ=60)
CGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATA < SRR4302535.929295/94‑1 (MQ=60)
CGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATA > SRR4302535.1041352/1‑94 (MQ=60)
GGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATAC > SRR4302535.2567481/1‑94 (MQ=60)
GCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACG > SRR4302535.1990165/1‑94 (MQ=60)
GCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACC < SRR4302535.4647070/94‑1 (MQ=60)
GCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACC < SRR4302535.1979353/94‑1 (MQ=60)
GCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACC < SRR4302535.1695526/94‑1 (MQ=60)
CAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCG > SRR4302535.2950417/1‑94 (MQ=60)
CAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCG > SRR4302535.3278861/1‑94 (MQ=60)
AGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGG > SRR4302535.1629216/1‑94 (MQ=60)
AGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGG < SRR4302535.1127304/94‑1 (MQ=60)
AGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGG > SRR4302535.4247452/1‑94 (MQ=60)
GACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGC > SRR4302535.338522/1‑94 (MQ=60)
CCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTGGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTT > SRR4302535.1983779/1‑94 (MQ=60)
CCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTT > SRR4302535.2397608/1‑94 (MQ=60)
CCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTT > SRR4302535.2681007/1‑94 (MQ=60)
TTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGT > SRR4302535.768647/1‑94 (MQ=60)
TTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGT < SRR4302535.4331189/94‑1 (MQ=60)
TTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTC < SRR4302535.4177799/94‑1 (MQ=60)
TTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCA < SRR4302535.3809271/94‑1 (MQ=60)
TGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAA < SRR4302535.2442743/94‑1 (MQ=60)
CTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAAC < SRR4302535.295989/94‑1 (MQ=60)
CTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAAC > SRR4302535.1351578/1‑94 (MQ=60)
CTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAAC < SRR4302535.2725246/94‑1 (MQ=60)
TAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACA > SRR4302535.3845714/1‑94 (MQ=60)
TAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACA < SRR4302535.4336598/94‑1 (MQ=60)
TAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACA < SRR4302535.412191/94‑1 (MQ=60)
TAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACA < SRR4302535.195942/94‑1 (MQ=60)
AACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACAC > SRR4302535.2395799/1‑94 (MQ=60)
AACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACAC > SRR4302535.2731110/1‑94 (MQ=60)
CAGACGGGCAGTGCCCCCCGGAGACAGCAGCCCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTG < SRR4302535.152116/94‑1 (MQ=60)
AGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGA > SRR4302535.1244566/1‑94 (MQ=60)
AGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGA > SRR4302535.753294/1‑94 (MQ=60)
GACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAG > SRR4302535.3821545/1‑94 (MQ=60)
ACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGC > SRR4302535.624528/1‑94 (MQ=60)
GGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGA > SRR4302535.2220597/1‑94 (MQ=60)
GGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGA > SRR4302535.1792935/1‑94 (MQ=60)
GCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAG < SRR4302535.3369006/94‑1 (MQ=60)
CAGTGCCCCCTGTAGACAGCAGCTCCACGCCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGC < SRR4302535.1987239/94‑1 (MQ=60)
CAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGC < SRR4302535.2133692/94‑1 (MQ=60)
AGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCG > SRR4302535.4113487/1‑94 (MQ=60)
GTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGC < SRR4302535.4396372/94‑1 (MQ=60)
GTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGC < SRR4302535.440230/94‑1 (MQ=60)
TGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCG < SRR4302535.3732123/94‑1 (MQ=60)
CCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGACTTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGC > SRR4302535.2024531/1‑94 (MQ=60)
CCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGC < SRR4302535.4718662/94‑1 (MQ=60)
CCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGC < SRR4302535.2337891/94‑1 (MQ=60)
CCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGC > SRR4302535.1336731/1‑94 (MQ=60)
CCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCG > SRR4302535.4005339/1‑94 (MQ=60)
CCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGA > SRR4302535.2982273/1‑94 (MQ=60)
CCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGA > SRR4302535.1596166/1‑94 (MQ=60)
CTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGAC > SRR4302535.4563867/1‑94 (MQ=60)
CTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTCGGCGAATTCGACGATACCAGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGAC > SRR4302535.586963/1‑94 (MQ=60)
GTAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTG > SRR4302535.779989/1‑94 (MQ=60)
TAGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGG < SRR4302535.3489105/94‑1 (MQ=60)
AGACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGA > SRR4302535.2920055/1‑94 (MQ=60)
GACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGAC < SRR4302535.3718816/94‑1 (MQ=60)
ACAGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACG < SRR4302535.3506606/94‑1 (MQ=60)
CAGCAGCTCCACACCGCGTGCGAAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGA < SRR4302535.4414698/94‑1 (MQ=60)
AGCAGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGAC < SRR4302535.2697560/94‑1 (MQ=60)
AGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTT > SRR4302535.3509107/1‑94 (MQ=60)
AGCTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTT > SRR4302535.1782520/1‑94 (MQ=60)
CTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGT > SRR4302535.1958264/1‑94 (MQ=60)
CTCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGT > SRR4302535.50422/1‑94 (MQ=60)
TCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTT < SRR4302535.4654702/94‑1 (MQ=60)
TCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTT < SRR4302535.2593741/94‑1 (MQ=60)
TCCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTT > SRR4302535.2910047/1‑94 (MQ=60)
CCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTTTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTG > SRR4302535.388473/1‑94 (MQ=60)
CCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTG > SRR4302535.46059/1‑94 (MQ=60)
CCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTG > SRR4302535.2001272/1‑94 (MQ=60)
CCACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTG > SRR4302535.661777/1‑94 (MQ=60)
CACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGC < SRR4302535.3691509/94‑1 (MQ=60)
ACACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCA < SRR4302535.1885863/94‑1 (MQ=60)
CACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGCTGTTGCAT < SRR4302535.3932905/94‑1 (MQ=60)
ACCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATG < SRR4302535.4285074/94‑1 (MQ=60)
CCGCGTGCGGAAAGGCCCTGGGCGAATTCGGCGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGG < SRR4302535.53171/94‑1 (MQ=60)
CCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGG < SRR4302535.4398731/94‑1 (MQ=60)
CCGCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGG < SRR4302535.1956556/94‑1 (MQ=60)
GCGTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTA < SRR4302535.4205400/94‑1 (MQ=60)
GTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAA > SRR4302535.287427/1‑94 (MQ=60)
GTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAA < SRR4302535.2399139/94‑1 (MQ=60)
GTGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAA > SRR4302535.2993911/1‑94 (MQ=60)
TGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAAT < SRR4302535.1351491/94‑1 (MQ=60)
TGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAAT < SRR4302535.1445104/94‑1 (MQ=60)
TGCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAAT < SRR4302535.3705042/94‑1 (MQ=60)
GCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATC < SRR4302535.3510458/94‑1 (MQ=60)
GCGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATC < SRR4302535.2533969/94‑1 (MQ=60)
CGGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCC < SRR4302535.3174775/94‑1 (MQ=60)
GGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCC > SRR4302535.1167291/1‑94 (MQ=60)
CGAAAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCC < SRR4302535.3994875/94‑1 (MQ=60)
AAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCTG < SRR4302535.4646062/94‑1 (MQ=60)
AAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCTG < SRR4302535.1331280/94‑1 (MQ=60)
AAGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCTG > SRR4302535.2301977/1‑94 (MQ=60)
AGCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCTGG < SRR4302535.222156/94‑1 (MQ=60)
GCGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCTGGA < SRR4302535.83315/94‑1 (MQ=60)
CGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCTGGAT < SRR4302535.2170104/94‑1 (MQ=60)
CGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCTGGAT > SRR4302535.3727027/1‑94 (MQ=60)
|
GTAATCGGAAACTTCGGTTACCGGCAGACCTTTTTCTGCTAACAGACGGGCAGTGCCCCCTGTAGACAGCAGCTCCACACCGCGTGCGGAAAGTGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGACGACGTTGTTGCATGGTAAATCCCCTGGAT > NC_000913/4204940‑4205126
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
