Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,215,945 |
T→C |
S420P (TCT→CCT) |
aceA → |
isocitrate lyase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,215,945 | 0 | T | C | 99.6%
| 779.3
/ ‑4.5
| 248 | S420P (TCT→CCT) | aceA | isocitrate lyase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (148/99); minor base A (1/0); total (149/99) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.12e-01 |
Only 100 of 254 total aligned reads displayed.
GCGAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGTCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTC > NC_000913/4215855‑4216034
|
gAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTc > 1:413417/1‑93 (MQ=255)
aaaGATGGCTATACCTTCGTATCTCACCAGAAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCa < 2:1789715/93‑1 (MQ=255)
aGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGt > 2:3320969/1‑93 (MQ=255)
aGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGt < 1:2017076/93‑1 (MQ=255)
aTGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCa > 1:1136320/1‑93 (MQ=255)
tGGCTATCCCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCAc < 2:4318621/93‑1 (MQ=255)
tGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCAc > 2:1628363/1‑93 (MQ=255)
ggCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCAcc > 2:1299273/1‑93 (MQ=255)
tataCCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACcgcg > 1:1367348/1‑93 (MQ=255)
ataCCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCgcgc < 1:4393951/93‑1 (MQ=255)
ataCCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCgcgc > 1:1253456/1‑93 (MQ=255)
taCCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCt > 2:2753766/1‑93 (MQ=255)
taCCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCt > 2:1228536/1‑93 (MQ=255)
aCCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTg > 1:2982653/1‑93 (MQ=255)
ccTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGa > 2:2221082/1‑93 (MQ=255)
cTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGAc > 1:1719224/1‑93 (MQ=255)
ttCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGAcc > 2:2841548/1‑93 (MQ=255)
gTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGc > 2:4373210/1‑93 (MQ=255)
aTCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTc > 2:3257499/1‑93 (MQ=255)
aTCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTc > 2:3903401/1‑93 (MQ=255)
tctcACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTcc > 1:1890845/1‑93 (MQ=255)
aCCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTg > 1:2246397/1‑93 (MQ=255)
aCCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTg > 2:2584915/1‑93 (MQ=255)
ccAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTga > 1:228951/1‑93 (MQ=255)
cagcagGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTgaa < 1:1086127/93‑1 (MQ=255)
agcagGAAGTGGGTACAGGTTACTTCGATAAGGTGACGACTATTATTCAGGGAGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTgaag > 1:2748204/1‑93 (MQ=255)
agcagGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTgaag < 1:2484281/93‑1 (MQ=255)
gcagGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTgaaga < 2:9407/93‑1 (MQ=255)
gcagGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTgaaga < 2:3708995/93‑1 (MQ=255)
gcagGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTgaaga > 1:3076878/1‑93 (MQ=255)
agGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAAt > 2:207419/1‑93 (MQ=255)
ggAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATc > 2:4485163/1‑93 (MQ=255)
ggAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATc < 2:3144963/93‑1 (MQ=255)
gAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCg > 1:3823089/1‑93 (MQ=255)
aaGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGc < 2:4265635/93‑1 (MQ=255)
gTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAg < 1:100285/93‑1 (MQ=255)
tGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGt < 2:3006666/93‑1 (MQ=255)
ggTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTc < 2:3350508/93‑1 (MQ=255)
ggTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTc < 2:830388/93‑1 (MQ=255)
ggTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTc > 2:2527007/1‑93 (MQ=255)
ggTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTc > 1:3666107/1‑93 (MQ=255)
gaCAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTa < 2:1963498/92‑1 (MQ=255)
aCAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTaa < 1:428008/93‑1 (MQ=255)
cAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAg > 1:987/1‑93 (MQ=255)
ggTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcc > 2:4052539/1‑92 (MQ=255)
ggTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGca > 2:4556259/1‑93 (MQ=255)
ggTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGACTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGca > 1:4238474/1‑93 (MQ=255)
gTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaa > 2:3095561/1‑93 (MQ=255)
gTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaa > 2:1419772/1‑93 (MQ=255)
ttACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaac > 1:481120/1‑93 (MQ=255)
ttACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaac < 1:946582/93‑1 (MQ=255)
aCTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaacaa > 2:3196880/1‑93 (MQ=255)
aCTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaacaa > 2:2343923/1‑93 (MQ=255)
aCTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaacaa < 2:1864069/93‑1 (MQ=255)
aCTTCGATAAAGGGACGACTATTATTCAGGGGGGCACGCCTTCAGTCACCGCGCTGACCGGCTGCACTGAAGAATCGCAGTTCTAAGcgacca > 2:3653446/1‑91 (MQ=255)
cTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaacaac < 2:3563598/93‑1 (MQ=255)
cTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaacaac > 2:2082831/1‑93 (MQ=255)
cTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaacaac > 1:1560730/1‑93 (MQ=255)
cTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaacaaa > 2:1455016/1‑92 (MQ=255)
ttCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaacaaca < 1:2238351/93‑1 (MQ=255)
ttCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaacaaca > 2:1060697/1‑93 (MQ=255)
tCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGcaacaacaa > 2:2298995/1‑93 (MQ=255)
cGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCaacaacaac < 1:4620339/93‑1 (MQ=255)
cGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCaacaacaac < 1:2334132/93‑1 (MQ=255)
gATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAAcc > 1:342617/1‑93 (MQ=255)
gATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAAcc < 2:3967012/93‑1 (MQ=255)
aTAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCg > 2:3533366/1‑93 (MQ=255)
aTAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCg > 1:764654/1‑93 (MQ=255)
tAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGt > 2:2763143/1‑93 (MQ=255)
aaGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTg > 1:1956276/1‑93 (MQ=255)
aaGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAAAAACAGTTg > 1:3336032/1‑93 (MQ=255)
gTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGCCGCATCGCAGTTCTAAGCAACAACAACCGTAGCt > 1:527302/1‑93 (MQ=255)
gTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCt > 1:3615708/1‑93 (MQ=255)
gTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCt < 1:731237/93‑1 (MQ=255)
gTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCt > 1:3960548/1‑93 (MQ=255)
tGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTg < 1:3868044/93‑1 (MQ=255)
acgacTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGAc > 1:2596567/1‑93 (MQ=255)
acgacTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGAc < 2:670272/93‑1 (MQ=255)
cgacTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACt > 1:2882565/1‑93 (MQ=255)
gacTATTATTCAGGACGGCACGCCTTCAGTCACCGCGCTGTCCTGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTg < 2:4114755/93‑1 (MQ=255)
cTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTa > 2:128770/1‑93 (MQ=255)
attattCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAgg > 2:487070/1‑93 (MQ=255)
attattCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAgg > 2:63501/1‑93 (MQ=255)
attattCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAgg > 1:1730383/1‑93 (MQ=255)
attattCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAgg > 1:4486581/1‑93 (MQ=255)
tattCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGcc > 2:2540662/1‑93 (MQ=255)
attCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCg > 2:2611931/1‑93 (MQ=255)
attCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCg < 1:915393/93‑1 (MQ=255)
attCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCg > 1:640416/1‑93 (MQ=255)
ttCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCgg > 1:1436327/1‑93 (MQ=255)
ttCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCgg > 1:4574918/1‑93 (MQ=255)
tCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGa > 1:3602458/1‑93 (MQ=255)
cAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGAt < 1:159890/93‑1 (MQ=255)
aGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATa > 2:732664/1‑93 (MQ=255)
gcggcACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAgg < 1:657053/93‑1 (MQ=255)
gggcACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGc < 1:440787/92‑1 (MQ=255)
cACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGtt < 1:3192640/93‑1 (MQ=255)
cACGCCTTCAGTCACCGCGCTGACCGGCTACACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGtt < 2:4604487/93‑1 (MQ=255)
aCGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTc < 2:2806617/93‑1 (MQ=255)
aCGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTc > 1:3784314/1‑93 (MQ=255)
|
GCGAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGTCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTC > NC_000913/4215855‑4216034
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGCGAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGTCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGC > NC_000913/4215852‑4216038
|
GCCGCGAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGC > SRR4302535.2452101/1‑94 (MQ=60)
GCGAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTT < SRR4302535.55387/94‑1 (MQ=60)
CGAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTC > SRR4302535.416320/1‑94 (MQ=60)
GAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGAGGGTACAGGATACTTCGATAAAGTGACGACTATTATTCAGGGCGGCAAGCCTTCA > SRR4302535.2285467/1‑94 (MQ=60)
AAGATGGCTATACCTTCGTATCTCACCAGCATGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGAGGCACGGCTTCAGT > SRR4302535.1919702/1‑94 (MQ=60)
AGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTC < SRR4302535.2031605/94‑1 (MQ=60)
AGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTC < SRR4302535.859659/94‑1 (MQ=60)
GATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCA < SRR4302535.314688/94‑1 (MQ=60)
GATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCA > SRR4302535.1144422/1‑94 (MQ=60)
TGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACC > SRR4302535.975336/1‑94 (MQ=60)
GGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCG < SRR4302535.3860200/94‑1 (MQ=60)
CTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCG > SRR4302535.655498/1‑94 (MQ=60)
CTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCG > SRR4302535.1377121/1‑94 (MQ=60)
CTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCG < SRR4302535.4534183/94‑1 (MQ=60)
CTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCC > SRR4302535.3631605/1‑94 (MQ=60)
TATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGC > SRR4302535.1262420/1‑94 (MQ=60)
TATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGC > SRR4302535.486705/1‑94 (MQ=60)
ATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCT > SRR4302535.3441224/1‑94 (MQ=60)
ATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCT < SRR4302535.4424017/94‑1 (MQ=60)
TACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTG > SRR4302535.3003574/1‑94 (MQ=60)
CCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGAC > SRR4302535.4181448/1‑94 (MQ=60)
CCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGAC > SRR4302535.1731658/1‑94 (MQ=60)
GTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCT > SRR4302535.166123/1‑94 (MQ=60)
GTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCT > SRR4302535.3845832/1‑94 (MQ=60)
TATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTC > SRR4302535.3078233/1‑94 (MQ=60)
TATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTC > SRR4302535.699041/1‑94 (MQ=60)
TATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTC > SRR4302535.984062/1‑94 (MQ=60)
ATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGGCGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCC > SRR4302535.2535622/1‑94 (MQ=60)
ATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCC > SRR4302535.2353627/1‑94 (MQ=60)
ATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCC > SRR4302535.1904464/1‑94 (MQ=60)
ATCTCACCAGCAGGAAGGGGGGACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCAGCACGCCTTCAGTCACCGCGCTGACCGGCTCC > SRR4302535.4399663/1‑94 (MQ=60)
CTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCAC > SRR4302535.1995843/1‑94 (MQ=60)
CTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCAC > SRR4302535.1350857/1‑94 (MQ=60)
CTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCAC > SRR4302535.2181956/1‑94 (MQ=60)
CACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTG > SRR4302535.2262369/1‑94 (MQ=60)
ACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGA > SRR4302535.230528/1‑94 (MQ=60)
CAGCAGGAAGTGGGTACAGGTTACTTCGATAAGGTGACGACTATTATTCAGGGAGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAG > SRR4302535.2767793/1‑94 (MQ=60)
CAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAG < SRR4302535.1093849/94‑1 (MQ=60)
AGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGA > SRR4302535.3098342/1‑94 (MQ=60)
AGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGA < SRR4302535.2502190/94‑1 (MQ=60)
AGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGA > SRR4302535.4240006/1‑94 (MQ=60)
GCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAA > SRR4302535.2491635/1‑94 (MQ=60)
CAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAAT > SRR4302535.4651651/1‑94 (MQ=60)
AGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATC > SRR4302535.3671956/1‑94 (MQ=60)
AGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACNATTATTCAGGGCGGCACGCCTTCAGNCACCGCGCTGNCCGGCNCNACNGNANANTC > SRR4302535.230646/1‑94 (MQ=60)
GGAAGTGTGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCG < SRR4302535.2260786/94‑1 (MQ=60)
GGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCG > SRR4302535.3849460/1‑94 (MQ=60)
GGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCG > SRR4302535.2006956/1‑94 (MQ=60)
AAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCA < SRR4302535.1306588/94‑1 (MQ=60)
AAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCA > SRR4302535.1794779/1‑94 (MQ=60)
AGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAG > SRR4302535.2911322/1‑94 (MQ=60)
AGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAG > SRR4302535.3392623/1‑94 (MQ=60)
GTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGT < SRR4302535.100991/94‑1 (MQ=60)
GGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTC > SRR4302535.3691494/1‑94 (MQ=60)
GGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCT > SRR4302535.917504/1‑94 (MQ=60)
GGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCT < SRR4302535.4365631/94‑1 (MQ=60)
ACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAG > SRR4302535.999/1‑94 (MQ=60)
ACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAG < SRR4302535.430985/94‑1 (MQ=60)
ACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAG < SRR4302535.752601/94‑1 (MQ=60)
ACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGACACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAG < SRR4302535.553463/94‑1 (MQ=60)
AGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCA < SRR4302535.2684400/94‑1 (MQ=60)
AGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGACTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCA > SRR4302535.4267492/1‑94 (MQ=60)
GGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCCCGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAA < SRR4302535.3957430/94‑1 (MQ=60)
GGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAA > SRR4302535.4575865/1‑94 (MQ=60)
GGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAA > SRR4302535.4689578/1‑94 (MQ=60)
GTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAAC > SRR4302535.1399570/1‑94 (MQ=60)
GTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAAC < SRR4302535.946783/94‑1 (MQ=60)
GTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAAC > SRR4302535.484493/1‑94 (MQ=60)
TTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACA > SRR4302535.4426523/1‑94 (MQ=60)
TTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACA < SRR4302535.953289/94‑1 (MQ=60)
TTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACA < SRR4302535.2931943/94‑1 (MQ=60)
TACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAA > SRR4302535.1738611/1‑94 (MQ=60)
ACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAAC > SRR4302535.1571976/1‑94 (MQ=60)
ACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAAC < SRR4302535.15051/94‑1 (MQ=60)
CTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACA > SRR4302535.4449400/1‑94 (MQ=60)
CTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACA < SRR4302535.2311450/94‑1 (MQ=60)
TTCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAA < SRR4302535.2254275/94‑1 (MQ=60)
TCGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAAC < SRR4302535.3554653/94‑1 (MQ=60)
CGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACC < SRR4302535.4651733/94‑1 (MQ=60)
CGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACC > SRR4302535.4307507/1‑94 (MQ=60)
CGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACC < SRR4302535.2350837/94‑1 (MQ=60)
CGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACC > SRR4302535.344989/1‑94 (MQ=60)
CGATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACC < SRR4302535.4441556/94‑1 (MQ=60)
GATAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCG > SRR4302535.770041/1‑94 (MQ=60)
TAAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTT < SRR4302535.1838632/94‑1 (MQ=60)
AAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAGGAATCGCAGTTCTAAGCAACAACAACCGTTG > SRR4302535.1038385/1‑94 (MQ=60)
AAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTG > SRR4302535.1970355/1‑94 (MQ=60)
AAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTG < SRR4302535.1598015/94‑1 (MQ=60)
AAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTG < SRR4302535.356277/94‑1 (MQ=60)
AAAGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAAAAACAGTTG > SRR4302535.3359265/1‑94 (MQ=60)
AGTGACGACTATTATTCAGGGCGTCACTCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCT < SRR4302535.1694642/94‑1 (MQ=60)
AGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGCCGCATCGCAGTTCTAAGCAACAACAACCGTAGCT > SRR4302535.530986/1‑94 (MQ=60)
AGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCT > SRR4302535.2674141/1‑94 (MQ=60)
AGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCT > SRR4302535.3640775/1‑94 (MQ=60)
AGTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCT > SRR4302535.3987596/1‑94 (MQ=60)
GTGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTG < SRR4302535.736371/94‑1 (MQ=60)
TGACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGA < SRR4302535.3894636/94‑1 (MQ=60)
GACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGAC > SRR4302535.2615215/1‑94 (MQ=60)
ACGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACT > SRR4302535.2902966/1‑94 (MQ=60)
CGACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGATCTAAGCAACAACAACCGTTGCTGACTT > SRR4302535.3765735/1‑94 (MQ=60)
GACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGT > SRR4302535.2833012/1‑94 (MQ=60)
ACTATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTA < SRR4302535.1512749/94‑1 (MQ=60)
TATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGG > SRR4302535.1742893/1‑94 (MQ=60)
TATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGG < SRR4302535.2305526/94‑1 (MQ=60)
TATTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGG > SRR4302535.4517381/1‑94 (MQ=60)
TTATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCC < SRR4302535.4695282/94‑1 (MQ=60)
TATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCG > SRR4302535.644891/1‑94 (MQ=60)
ATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGG > SRR4302535.1446589/1‑94 (MQ=60)
ATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGG > SRR4302535.4606098/1‑94 (MQ=60)
ATTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGG < SRR4302535.921893/94‑1 (MQ=60)
TTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGA < SRR4302535.416006/94‑1 (MQ=60)
TTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGA > SRR4302535.3279503/1‑94 (MQ=60)
TTCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGA > SRR4302535.3627456/1‑94 (MQ=60)
TCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGAT < SRR4302535.213019/94‑1 (MQ=60)
TCAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGAT < SRR4302535.1231038/94‑1 (MQ=60)
CAGGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATA < SRR4302535.161011/94‑1 (MQ=60)
GGGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAG < SRR4302535.3187125/94‑1 (MQ=60)
GGCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGG < SRR4302535.3982796/94‑1 (MQ=60)
GCGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGC < SRR4302535.661638/94‑1 (MQ=60)
GGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCG < SRR4302535.443872/94‑1 (MQ=60)
CGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCG > SRR4302535.3822011/1‑94 (MQ=60)
CGGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCG < SRR4302535.1130275/94‑1 (MQ=60)
GGCACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGT < SRR4302535.69700/94‑1 (MQ=60)
CACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTC > SRR4302535.3810423/1‑94 (MQ=60)
CACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTC < SRR4302535.3214726/94‑1 (MQ=60)
ACGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCA < SRR4302535.1103219/94‑1 (MQ=60)
CGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCAC < SRR4302535.3579205/94‑1 (MQ=60)
CGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCAC < SRR4302535.1446075/94‑1 (MQ=60)
CGCCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCAC < SRR4302535.2563259/94‑1 (MQ=60)
CCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGC > SRR4302535.917132/1‑94 (MQ=60)
CCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGC > SRR4302535.2722561/1‑94 (MQ=60)
CCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGC > SRR4302535.2722557/1‑94 (MQ=60)
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GCCGCGAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGTCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAAGCAACAACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGC > NC_000913/4215852‑4216038
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
