Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,284,457 |
C→T |
G165D (GGC→GAC) |
acs ← |
acetyl‑CoA synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,284,457 | 0 | C | T | 100.0%
| 577.9
/ NA
| 175 | G165D (GGC→GAC) | acs | acetyl‑CoA synthetase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (92/83); total (92/83) |
Only 100 of 196 total aligned reads displayed.
CTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGCCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCCACC > NC_000913/4284367‑4284549
|
cTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAgtcg > 2:1973770/1‑93 (MQ=255)
tGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAgtcgc > 2:516808/1‑93 (MQ=255)
ccGGCACGCGCACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGaaa < 1:1405382/93‑1 (MQ=255)
ccGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGaaa > 2:2280752/1‑93 (MQ=255)
cGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGaaaa < 1:4369924/93‑1 (MQ=255)
cGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGaaaa < 2:3036942/93‑1 (MQ=255)
gcacgcacACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATc < 1:1775217/93‑1 (MQ=255)
gcacACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCg > 1:131239/1‑93 (MQ=255)
cacaCCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGa > 1:4658564/1‑93 (MQ=255)
cacCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAAt > 1:553166/1‑93 (MQ=255)
acCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATg > 2:3878339/1‑93 (MQ=255)
acCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATg > 2:167161/1‑93 (MQ=255)
ccTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGc > 1:2220248/1‑93 (MQ=255)
ccTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGc > 1:655350/1‑93 (MQ=255)
ccTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGc > 1:1591666/1‑93 (MQ=255)
cTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCa > 1:3250471/1‑93 (MQ=255)
cTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCa < 1:1785393/93‑1 (MQ=255)
ttCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCAc < 2:1899504/93‑1 (MQ=255)
ttCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGAGCCCGGCAACGGCTTCCGGCGAGAAGACGCCGAAAATCACCGATTGCAc > 1:2117570/1‑93 (MQ=255)
ggAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGcc > 2:2356509/1‑93 (MQ=255)
ggAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGcc > 1:2857043/1‑93 (MQ=255)
gAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCa > 1:604736/1‑93 (MQ=255)
aaGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCaa > 1:2900060/1‑93 (MQ=255)
aaGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCaa < 1:4490503/93‑1 (MQ=255)
aGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAAt < 1:2639708/93‑1 (MQ=255)
aGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCAACGAATGCACCGCGCCAAt > 2:3998749/1‑93 (MQ=255)
gATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTTCGGCGAGAAGTCGCCGAAAATCACCGAATGCACAGCGCCAATGCg > 2:4344228/1‑93 (MQ=255)
gATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCg > 2:1284195/1‑93 (MQ=255)
gATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCg > 1:43471/1‑93 (MQ=255)
aTCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCgg < 1:4230712/93‑1 (MQ=255)
aTCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCgg > 1:1964338/1‑93 (MQ=255)
aTCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCgg > 1:2645016/1‑93 (MQ=255)
aTCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCgg > 1:1655863/1‑93 (MQ=255)
tCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCggg > 2:431799/1‑93 (MQ=255)
aCCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGgcg > 1:2097455/1‑93 (MQ=255)
cAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGCCTTCCGGCGAGAAGTCGCGGAAAATCACCGAATGCACCGCGCCAATGCGGgcgcg < 2:776891/93‑2 (MQ=255)
gTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAgg < 1:1341043/93‑1 (MQ=255)
gTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAgg > 1:25588/1‑93 (MQ=255)
gTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCa > 2:679257/1‑93 (MQ=255)
tGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAg > 1:4615090/1‑93 (MQ=255)
tGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAATAGCCGAAAATCACCGAATGCACCGCGCCAAGGCGGGCGCAGGCGAg > 2:4378190/1‑93 (MQ=255)
ggAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAg < 2:404402/92‑1 (MQ=255)
gAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGTCAATGCGGGCGCAGGCCAGc > 2:4407518/1‑93 (MQ=255)
gAGTTGGAATCAATAATGCGCCCGGCAACGGCCTCCGGCGTGAAGTCGCCGAAAATCACCCAATGCTCCACGCCCAAGCGGGCGCCGGGCAGc > 2:2750587/1‑93 (MQ=255)
gTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCAt < 2:3830976/93‑1 (MQ=255)
gTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCAt > 2:3734045/1‑93 (MQ=255)
ttGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATc < 1:4264225/93‑1 (MQ=255)
ttGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATc < 2:154422/93‑1 (MQ=255)
tGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCg > 1:1544375/1‑93 (MQ=255)
gAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCa > 1:4526658/1‑93 (MQ=255)
gAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCa < 2:1239122/93‑1 (MQ=255)
aTCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAAc < 1:4301590/93‑1 (MQ=255)
aTCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAAc < 1:215939/93‑1 (MQ=255)
aTCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAAc < 2:2224142/93‑1 (MQ=255)
aTCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAAc > 2:3770161/1‑93 (MQ=255)
aTCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAAc < 1:2424908/93‑1 (MQ=255)
tCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAAcc > 1:1164438/1‑93 (MQ=255)
tCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAAcc > 2:3394542/1‑93 (MQ=255)
tCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAAcc > 1:1849885/1‑93 (MQ=255)
cAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACcg > 2:2576626/1‑93 (MQ=255)
aataatGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAAcccg > 2:3122779/1‑91 (MQ=255)
aataatGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACcgc < 2:1123993/93‑1 (MQ=255)
aataatGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACcgc > 1:749449/1‑93 (MQ=255)
aataatGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACcgc < 1:2601430/93‑1 (MQ=255)
taatGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCgg > 1:4133608/1‑93 (MQ=255)
taatGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCgg > 2:3519299/1‑93 (MQ=255)
taatGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCgg < 2:2363868/93‑1 (MQ=255)
aatGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGc < 1:2312080/93‑1 (MQ=255)
cgcCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTcc < 2:3461477/93‑1 (MQ=255)
cgcCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTcc < 2:3429225/93‑1 (MQ=255)
cgcCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTcc < 1:443896/93‑1 (MQ=255)
ccGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGc > 1:3123199/1‑93 (MQ=255)
cGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCa < 1:3997508/93‑1 (MQ=255)
gCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCAcc < 2:3103951/93‑1 (MQ=255)
cAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCCGCATCGCAACCGCGGCTTCCGGCACCa > 2:2298717/1‑93 (MQ=255)
aaCGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCATGCCAGCATCGCAACCGCGGCTTCCGGCACCAt < 1:3531406/93‑1 (MQ=255)
aaCGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCAt < 2:2156483/93‑1 (MQ=255)
aaCGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCAt > 1:2316390/1‑93 (MQ=255)
aaCGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCAt < 2:2907649/93‑1 (MQ=255)
aCGGCTTCCGGCGAGAAGTCTCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATc < 1:1042218/93‑1 (MQ=255)
aCGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATc < 1:3749196/93‑1 (MQ=255)
cGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCg < 1:1039790/93‑1 (MQ=255)
ggCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCgg > 2:556557/1‑93 (MQ=255)
gCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGc > 1:4056407/1‑93 (MQ=255)
gCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGc > 2:2096075/1‑93 (MQ=255)
gCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGc < 2:1866471/93‑1 (MQ=255)
gCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGc < 1:563734/93‑1 (MQ=255)
gCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGc > 1:1197000/1‑93 (MQ=255)
cTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCa > 1:4165788/1‑93 (MQ=255)
cTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCa < 1:3181999/93‑1 (MQ=255)
ttCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCat > 1:3363615/1‑93 (MQ=255)
tCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCata < 1:1789381/93‑1 (MQ=255)
cGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCAtata < 2:3328669/93‑1 (MQ=255)
ggCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATaa < 1:2403232/93‑1 (MQ=255)
cGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAAt < 2:4270333/93‑1 (MQ=255)
cGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAAt < 2:2038430/93‑1 (MQ=255)
gagaAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATc > 2:3966869/1‑93 (MQ=255)
gagaAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATc < 2:3217654/93‑1 (MQ=255)
aaGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGcc > 1:4017025/1‑93 (MQ=255)
ccgccgAAAATGACCGAATGCACGGCGCAAATGCGGGGGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGccacc < 2:3243651/93‑1 (MQ=255)
|
CTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGCCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCCACC > NC_000913/4284367‑4284549
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGCCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCCAC > NC_000913/4284365‑4284548
|
TACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTC < SRR4302535.3598820/94‑1 (MQ=60)
TACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTC < SRR4302535.2514028/94‑1 (MQ=60)
GCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCG < SRR4302535.3709552/94‑1 (MQ=60)
CGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGA > SRR4302535.2092854/1‑94 (MQ=60)
CCGGCACGCGCACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAA < SRR4302535.1415427/94‑1 (MQ=60)
CCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAA < SRR4302535.1586364/94‑1 (MQ=60)
CGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAAT < SRR4302535.4399830/94‑1 (MQ=60)
GCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCA < SRR4302535.1788075/94‑1 (MQ=60)
GCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCA < SRR4302535.1141593/94‑1 (MQ=60)
CGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCG > SRR4302535.132157/1‑94 (MQ=60)
GCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGA > SRR4302535.4690077/1‑94 (MQ=60)
CACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAA > SRR4302535.1533207/1‑94 (MQ=60)
CCACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAAT < SRR4302535.416840/94‑1 (MQ=60)
ACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAAT > SRR4302535.557037/1‑94 (MQ=60)
CACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATG > SRR4302535.127525/1‑94 (MQ=60)
CACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATG > SRR4302535.4572410/1‑94 (MQ=60)
ACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGC > SRR4302535.659927/1‑94 (MQ=60)
ACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGC > SRR4302535.1603150/1‑94 (MQ=60)
ACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGC > SRR4302535.4490388/1‑94 (MQ=60)
ACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGC > SRR4302535.2236049/1‑94 (MQ=60)
CCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCA < SRR4302535.4262111/94‑1 (MQ=60)
CCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCA > SRR4302535.3273054/1‑94 (MQ=60)
CCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCCAATGCA > SRR4302535.2180764/1‑94 (MQ=60)
CTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGCATGCAC > SRR4302535.1930487/1‑94 (MQ=60)
CTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCAC < SRR4302535.1798313/94‑1 (MQ=60)
CTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGAGCCCGGCAACGGCTTCCGGCGAGAAGACGCCGAAAATCACCGATTGCAC > SRR4302535.2132845/1‑94 (MQ=60)
CGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGC > SRR4302535.2594975/1‑94 (MQ=60)
GTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCG < SRR4302535.1801980/94‑1 (MQ=60)
CGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCC > SRR4302535.2877284/1‑94 (MQ=60)
GGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCA > SRR4302535.608965/1‑94 (MQ=60)
GGAAGTGATCACCAGTCGTGAGGTGGAATCAATAATCCGCCCGGTAACGGCTTCCCGTGAGAAGTCGCCGGAAATCACCGAATGCACCGtgccc > SRR4302535.1647359/1‑89 (MQ=60)
GAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAA > SRR4302535.2920562/1‑94 (MQ=60)
GAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAA > SRR4302535.2155556/1‑94 (MQ=60)
AAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAAT > SRR4302535.740863/1‑94 (MQ=60)
AAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAAT < SRR4302535.4521329/94‑1 (MQ=60)
AGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATG < SRR4302535.4054259/94‑1 (MQ=60)
AGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATG < SRR4302535.2658617/94‑1 (MQ=60)
TGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCG > SRR4302535.43799/1‑94 (MQ=60)
GATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGG > SRR4302535.2663959/1‑94 (MQ=60)
GATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGG > SRR4302535.1978500/1‑94 (MQ=60)
GATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGG > SRR4302535.1667840/1‑94 (MQ=60)
ATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGG < SRR4302535.4259664/94‑1 (MQ=60)
ATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGG < SRR4302535.4156672/94‑1 (MQ=60)
ATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGG < SRR4302535.3791354/94‑1 (MQ=60)
CACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCG > SRR4302535.2112582/1‑94 (MQ=60)
ACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGC > SRR4302535.571422/1‑94 (MQ=60)
CCAGTCGTGAGTTGGAATCAATAATCCGCCCGGCAACGGCTTCCGGCGAGGAGTCGGCGGAAATCACCGAAGGCACCGCGCCACTGGGGCCGCA > SRR4302535.132531/1‑94 (MQ=60)
AGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGG > SRR4302535.431009/1‑94 (MQ=60)
AGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGG < SRR4302535.4674731/94‑1 (MQ=60)
AGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGG < SRR4302535.1790768/94‑1 (MQ=60)
AGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGG > SRR4302535.25786/1‑94 (MQ=60)
GTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGC > SRR4302535.1353077/1‑94 (MQ=60)
GTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGC < SRR4302535.1350608/94‑1 (MQ=60)
GTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAG > SRR4302535.1728879/1‑94 (MQ=60)
GTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAG > SRR4302535.4646446/1‑94 (MQ=60)
AGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCAT < SRR4302535.2123262/94‑1 (MQ=60)
GTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATC < SRR4302535.4253333/94‑1 (MQ=60)
TTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCG < SRR4302535.4293428/94‑1 (MQ=60)
TTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCG < SRR4302535.3013906/94‑1 (MQ=60)
TTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCG > SRR4302535.1555500/1‑94 (MQ=60)
GGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCA > SRR4302535.4557665/1‑94 (MQ=60)
ATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACC > SRR4302535.1172755/1‑94 (MQ=60)
ATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACC < SRR4302535.4331021/94‑1 (MQ=60)
ATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACC < SRR4302535.217419/94‑1 (MQ=60)
ATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACC < SRR4302535.2442380/94‑1 (MQ=60)
ATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACC > SRR4302535.1863217/1‑94 (MQ=60)
agAATAATGCTCCCGGCAACGGCTTCCGGCTAGAAGCCGCCGAAAATCTCCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCG < SRR4302535.17056/92‑1 (MQ=60)
CAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGC > SRR4302535.754727/1‑94 (MQ=60)
CAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGC < SRR4302535.4398511/94‑1 (MQ=60)
AATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCG < SRR4302535.4414208/94‑1 (MQ=60)
AATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCG < SRR4302535.2620105/94‑1 (MQ=60)
AATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCG > SRR4302535.2328647/1‑94 (MQ=60)
ATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGG > SRR4302535.4161904/1‑94 (MQ=60)
TAATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACAGCGGC > SRR4302535.329276/1‑94 (MQ=60)
AATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCT < SRR4302535.2328633/94‑1 (MQ=60)
ATGCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTT < SRR4302535.610650/94‑1 (MQ=60)
GCGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCC < SRR4302535.1817202/94‑1 (MQ=60)
CGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAACTCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCG < SRR4302535.4716670/94‑1 (MQ=60)
CGCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCG < SRR4302535.447004/94‑1 (MQ=60)
GCCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGG > SRR4302535.3503228/1‑94 (MQ=60)
CCCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGC > SRR4302535.3144951/1‑94 (MQ=60)
CCGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCA > SRR4302535.4025491/1‑94 (MQ=60)
CGGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCAC < SRR4302535.4024859/94‑1 (MQ=60)
GGCAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACC > SRR4302535.1211/1‑94 (MQ=60)
CAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCAT > SRR4302535.3163256/1‑94 (MQ=60)
CAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCAT > SRR4302535.2332964/1‑94 (MQ=60)
CAACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCAT < SRR4302535.2635958/94‑1 (MQ=60)
AACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCATGCCAGCATCGCAACCGCGGCTTCCGGCACCATC < SRR4302535.3555923/94‑1 (MQ=60)
ACGGCTTCCGGCGAGAAGTCTCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCG < SRR4302535.1049606/94‑1 (MQ=60)
ACGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCG < SRR4302535.3775135/94‑1 (MQ=60)
CGGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGG < SRR4302535.1047167/94‑1 (MQ=60)
GGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGC > SRR4302535.4084177/1‑94 (MQ=60)
GGCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGC > SRR4302535.1205571/1‑94 (MQ=60)
GCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCA < SRR4302535.567679/94‑1 (MQ=60)
GCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCA > SRR4302535.4194313/1‑94 (MQ=60)
GCTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCA > SRR4302535.3229104/1‑94 (MQ=60)
CTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCAT > SRR4302535.3387019/1‑94 (MQ=60)
CTTCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCAT < SRR4302535.3203990/94‑1 (MQ=60)
TTCCGGCGAGAAGTCGCCGAAAACCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCACCCGCGGGTTCCGGCAGCATCGGCATT > SRR4302535.3969870/1‑94 (MQ=60)
TCCGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATAT < SRR4302535.1802324/94‑1 (MQ=60)
CGGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAA < SRR4302535.243588/94‑1 (MQ=60)
GGCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAA < SRR4302535.2420519/94‑1 (MQ=60)
GCGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAAT > SRR4302535.4550270/1‑94 (MQ=60)
CGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATC > SRR4302535.2492248/1‑94 (MQ=60)
CGAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATC > SRR4302535.4335270/1‑94 (MQ=60)
GAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCG < SRR4302535.2903171/94‑1 (MQ=60)
GAGAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCG > SRR4302535.2404978/1‑94 (MQ=60)
GAAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCC > SRR4302535.4044497/1‑94 (MQ=60)
AAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCCGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCCA < SRR4302535.2704410/94‑1 (MQ=60)
AAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCCA > SRR4302535.426476/1‑94 (MQ=60)
AAGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCCA < SRR4302535.2286417/94‑1 (MQ=60)
AGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCCAC > SRR4302535.1650433/1‑94 (MQ=60)
AGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCCAC < SRR4302535.1117549/94‑1 (MQ=60)
AGTCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCCAC > SRR4302535.844984/1‑94 (MQ=60)
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TACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGGAATCAATAATGCGCCCGGCAACGGCTTCCGGCGAGAAGCCGCCGAAAATCACCGAATGCACCGCGCCAATGCGGGCGCAGGCCAGCATCGCAACCGCGGCTTCCGGCACCATCGGCATATAAATCGCCAC > NC_000913/4284365‑4284548
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
