Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,297,280 |
T→C |
T444A (ACC→GCC) |
yjcP ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,297,280 | 0 | T | C | 100.0%
| 613.7
/ NA
| 196 | T444A (ACC→GCC) | yjcP | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (99/97); total (99/97) |
Only 100 of 210 total aligned reads displayed.
ATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGC > NC_000913/4297190‑4297368
|
aTTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTcggcgg > 1:908032/1‑93 (MQ=255)
aTTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTcggcgg > 2:2834330/1‑93 (MQ=255)
tttCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCggcggc > 2:3169144/1‑93 (MQ=255)
tttCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCggcggc > 2:2503439/1‑93 (MQ=255)
tttCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCggcggc > 1:221962/1‑93 (MQ=255)
tttCATCAACTGAATGCTTTGGATCACCCGGCGGCGGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCggcggc > 2:629840/1‑93 (MQ=255)
ttCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGcc < 2:309985/93‑1 (MQ=255)
catcaACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTg > 1:2287410/1‑93 (MQ=255)
atcaACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCTGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGt > 1:1805993/1‑93 (MQ=255)
aaCTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAg > 2:109623/1‑93 (MQ=255)
aaCTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAg < 2:1954611/93‑1 (MQ=255)
aaCTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAg > 1:1651464/1‑93 (MQ=255)
aaCTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAg > 1:3072922/1‑93 (MQ=255)
aCTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGc < 1:615239/93‑1 (MQ=255)
aCTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGc < 2:2859774/93‑1 (MQ=255)
aCTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGc > 2:4250578/1‑93 (MQ=255)
tGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCgg > 1:756524/1‑93 (MQ=255)
gAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGc > 2:2682413/1‑93 (MQ=255)
aaTGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCt < 2:2962217/93‑1 (MQ=255)
aaTGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCt > 2:247443/1‑93 (MQ=255)
tGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTgg > 1:2035292/1‑93 (MQ=255)
gCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGt < 2:1200386/93‑1 (MQ=255)
tttGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTa > 1:3044370/1‑93 (MQ=255)
ttGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTaa > 1:2654880/1‑93 (MQ=255)
ttGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTaa < 2:2893802/93‑1 (MQ=255)
ggATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGc < 1:4033931/93‑1 (MQ=255)
ggATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGc < 1:3683742/93‑1 (MQ=255)
ggATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGc < 1:1606550/93‑1 (MQ=255)
gATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGcc < 2:800794/93‑1 (MQ=255)
gATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGcc > 1:1298919/1‑93 (MQ=255)
gATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGcc > 1:1940216/1‑93 (MQ=255)
aTCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCcg < 1:878490/93‑1 (MQ=255)
aTCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCcg > 1:4444903/1‑93 (MQ=255)
ccGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTg > 1:1410842/1‑93 (MQ=255)
ccGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAAGCGCGATg > 1:3967149/1‑93 (MQ=255)
cggcggCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGa > 1:3853241/1‑93 (MQ=255)
cggcggCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGa < 2:407312/93‑1 (MQ=255)
cggcggCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGa < 1:2813779/93‑1 (MQ=255)
gcggcTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATa < 2:1106400/93‑1 (MQ=255)
gcggcTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATa < 1:1501902/93‑1 (MQ=255)
ggcTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAgg > 1:1673708/1‑93 (MQ=255)
gcTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAggc > 1:2368415/1‑93 (MQ=255)
gcTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAggc < 1:2573015/93‑1 (MQ=255)
cTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAggcg > 2:2083463/1‑93 (MQ=255)
tGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAggcgg > 2:4143151/1‑93 (MQ=255)
gTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAggcggc > 2:3824645/1‑93 (MQ=255)
tCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGcc < 2:2326951/93‑1 (MQ=255)
cAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTc > 1:564827/1‑93 (MQ=255)
aGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCg < 2:891727/93‑1 (MQ=255)
gCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCgg > 1:885890/1‑93 (MQ=255)
cATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGc < 2:4592045/93‑1 (MQ=255)
aTCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCa < 2:190909/93‑1 (MQ=255)
tCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAg < 1:381465/93‑1 (MQ=255)
tCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAg > 2:3739047/1‑93 (MQ=255)
tCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAg > 1:2411674/1‑93 (MQ=255)
cAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgg > 2:1349767/1‑92 (MQ=255)
cAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgc < 2:3727267/93‑1 (MQ=255)
tAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgcgcg > 1:3723307/1‑93 (MQ=255)
tAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgcgcg > 2:1840672/1‑93 (MQ=255)
aaTGACATCTCTTCGGCCAGCACTGGCAACCGGGCTTCGCCGCCCTGTAAGCGGCTGGTTAAGCCGCCCTGATAGGCGGCCTCGGCAgcgcgc < 2:1025737/93‑1 (MQ=255)
aaTGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgcgcgc < 2:216709/93‑1 (MQ=255)
aaTGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgcgcgc > 1:4014802/1‑93 (MQ=255)
aaTGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgcgcgc < 1:4200162/93‑1 (MQ=255)
aaTGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAgcgcgc < 2:2511876/93‑1 (MQ=255)
aTGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCt < 1:3909670/93‑1 (MQ=255)
gACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTgg > 1:4241688/1‑93 (MQ=255)
gACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTgg > 2:4443193/1‑93 (MQ=255)
gACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTgg < 2:2814742/93‑1 (MQ=255)
gACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTgg < 2:4534236/93‑1 (MQ=255)
aTCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTa > 2:4198718/1‑93 (MQ=255)
tctcTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTaa > 1:4477013/1‑93 (MQ=255)
tctTCGGCAGGCACTGGCACCCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAg < 1:3480963/93‑1 (MQ=255)
tctTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAg > 1:2859164/1‑93 (MQ=255)
ttCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAgcg > 1:3507566/1‑93 (MQ=255)
tCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAgcgc < 2:3564501/93‑1 (MQ=255)
cGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGcgcg < 2:59523/93‑1 (MQ=255)
ggCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGt < 2:2615192/93‑1 (MQ=255)
ggCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGt < 2:1808633/93‑1 (MQ=255)
gCAAGCTCTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTCAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTg < 1:4313732/93‑1 (MQ=255)
gCAAGCACTGGCAACCGGGCTTCGGCTGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTg < 2:706869/93‑1 (MQ=255)
aaGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGc < 2:4346620/93‑1 (MQ=255)
aaGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGc < 1:4386681/93‑1 (MQ=255)
aGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCt < 2:1762335/93‑1 (MQ=255)
aGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCt > 2:3345209/1‑93 (MQ=255)
aGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCt < 1:3174165/93‑1 (MQ=255)
ggCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCTGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCAcg < 1:4569529/93‑1 (MQ=255)
gCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCAcgc < 2:1233120/93‑1 (MQ=255)
agccGGGCTTCGCCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGt < 2:339284/91‑1 (MQ=255)
aaCCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGt > 2:733179/1‑93 (MQ=255)
aaCCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGt > 2:1372940/1‑93 (MQ=255)
cGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCa < 1:704194/93‑1 (MQ=255)
cGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCa < 2:1611847/93‑1 (MQ=255)
gggCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAg < 1:3654903/93‑1 (MQ=255)
ggCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGc < 2:1290014/93‑1 (MQ=255)
ggCTTCGGCAGCCTGTAAGCGGCTGGGTAAGCCGCGCTGGTAGGAGGGCTCGGCAGCCCGCTGGGCACAGCGCACTGCTTCGACGCGTTGAGc > 2:2383728/1‑93 (MQ=255)
cTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCt < 1:1002008/93‑1 (MQ=255)
ttCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTg > 2:1472743/1‑93 (MQ=255)
ttCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTg > 2:3302513/1‑93 (MQ=255)
ttCGGCGGCCTGTAAGCGGCTGGTTAAGCCCCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTg > 1:4453801/1‑93 (MQ=255)
tCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGc < 2:2029024/93‑1 (MQ=255)
|
ATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGC > NC_000913/4297190‑4297368
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGCATTTC > NC_000913/4297188‑4297373
|
CGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCG > SRR4302535.4404792/1‑94 (MQ=60)
GATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGG > SRR4302535.914479/1‑94 (MQ=60)
ATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGC > SRR4302535.223489/1‑94 (MQ=60)
TTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCT < SRR4302535.350868/94‑1 (MQ=60)
TCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTG > SRR4302535.2303751/1‑94 (MQ=60)
CATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCTGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGT > SRR4302535.1819041/1‑94 (MQ=60)
ATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTA > SRR4302535.555453/1‑94 (MQ=60)
ATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTA > SRR4302535.1698549/1‑94 (MQ=60)
TAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAG > SRR4302535.3094374/1‑94 (MQ=60)
CAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAG > SRR4302535.2070646/1‑94 (MQ=60)
CAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAG > SRR4302535.1663406/1‑94 (MQ=60)
ACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCG < SRR4302535.619519/94‑1 (MQ=60)
ACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCG < SRR4302535.2024056/94‑1 (MQ=60)
CTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGG > SRR4302535.761850/1‑94 (MQ=60)
GAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCT < SRR4302535.755024/94‑1 (MQ=60)
ATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGG > SRR4302535.2049955/1‑94 (MQ=60)
ATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGG < SRR4302535.2356760/94‑1 (MQ=60)
ATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGG > SRR4302535.887919/1‑94 (MQ=60)
ATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGG > SRR4302535.1260528/1‑94 (MQ=60)
ctntnnnancnCCGGCGGCNGNNNAGCATCAGTAATGACATCNCTNCGGCAAGCACTGGCAACCGGGCTTCGGCGGNCTGTAAGCGGCTGGTTA < SRR4302535.3635801/83‑1 (MQ=60)
CTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTA > SRR4302535.3065695/1‑94 (MQ=60)
TTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAA > SRR4302535.2673903/1‑94 (MQ=60)
GGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCC < SRR4302535.3709230/94‑1 (MQ=60)
GGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCC < SRR4302535.4061548/94‑1 (MQ=60)
GGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCC < SRR4302535.1618142/94‑1 (MQ=60)
GGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCC > SRR4302535.1308180/1‑94 (MQ=60)
GGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCC > SRR4302535.1954193/1‑94 (MQ=60)
GATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCG > SRR4302535.4475384/1‑94 (MQ=60)
ATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGC < SRR4302535.884709/94‑1 (MQ=60)
CCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAagcgcgatg > SRR4302535.3994247/1‑85 (MQ=60)
CCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTG > SRR4302535.1420917/1‑94 (MQ=60)
CCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGA > SRR4302535.3879748/1‑94 (MQ=60)
CGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGAT < SRR4302535.4476097/94‑1 (MQ=60)
CGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGAT < SRR4302535.2833777/94‑1 (MQ=60)
GGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATA < SRR4302535.619921/94‑1 (MQ=60)
GGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATA < SRR4302535.21753/94‑1 (MQ=60)
GCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAG < SRR4302535.1512708/94‑1 (MQ=60)
GCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAG > SRR4302535.404780/1‑94 (MQ=60)
GCGGCTGTCCAGCATCAGTAATGACATCTCTGCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAG < SRR4302535.2852114/94‑1 (MQ=60)
CGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGG < SRR4302535.4588420/94‑1 (MQ=60)
CGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGG > SRR4302535.1685822/1‑94 (MQ=60)
CGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGG < SRR4302535.922776/94‑1 (MQ=60)
GGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGC > SRR4302535.4091369/1‑94 (MQ=60)
GGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGC > SRR4302535.2385419/1‑94 (MQ=60)
GCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCG < SRR4302535.2634755/94‑1 (MQ=60)
GCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCG < SRR4302535.2591508/94‑1 (MQ=60)
CTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGATAAGCCGCGCAGATAGGCGG > SRR4302535.3149830/1‑94 (MQ=60)
TCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCT < SRR4302535.4611694/94‑1 (MQ=60)
CCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTC > SRR4302535.568781/1‑94 (MQ=60)
AGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGG > SRR4302535.892158/1‑94 (MQ=60)
CATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCA > SRR4302535.4030836/1‑94 (MQ=60)
ATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAG > SRR4302535.2429034/1‑94 (MQ=60)
ATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAG > SRR4302535.3989916/1‑94 (MQ=60)
TCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGC < SRR4302535.384103/94‑1 (MQ=60)
AGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTCAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGGGC > SRR4302535.900185/1‑94 (MQ=60)
AGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGGAGCGC > SRR4302535.3496776/1‑94 (MQ=60)
GTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCG > SRR4302535.3749098/1‑94 (MQ=60)
GTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCG < SRR4302535.3072460/94‑1 (MQ=60)
TAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGC > SRR4302535.4042260/1‑94 (MQ=60)
AATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCT < SRR4302535.3857132/94‑1 (MQ=60)
AATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCT < SRR4302535.848500/94‑1 (MQ=60)
AATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCT < SRR4302535.4228904/94‑1 (MQ=60)
AATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCT < SRR4302535.619436/94‑1 (MQ=60)
ATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTG > SRR4302535.162298/1‑94 (MQ=60)
ATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTG < SRR4302535.3936444/94‑1 (MQ=60)
TGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTTG > SRR4302535.1503029/1‑94 (MQ=60)
TGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGG > SRR4302535.4270719/1‑94 (MQ=60)
GACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGG < SRR4302535.3736715/94‑1 (MQ=60)
ACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGT > SRR4302535.4506692/1‑94 (MQ=60)
ACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGT < SRR4302535.2293987/94‑1 (MQ=60)
CATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGGCGCGCTGATTGGCGGCCTCGGCAGTGGCCTGGGTA > SRR4302535.2874937/1‑94 (MQ=60)
ATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAA > SRR4302535.4507751/1‑94 (MQ=60)
CTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAG < SRR4302535.4019333/94‑1 (MQ=60)
CTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAG > SRR4302535.2879418/1‑94 (MQ=60)
CTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAG > SRR4302535.4267343/1‑94 (MQ=60)
CTCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAG > SRR4302535.4423283/1‑94 (MQ=60)
TCTTCGGCAGGCACTGGCACCCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGC < SRR4302535.3505143/94‑1 (MQ=60)
TCTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTGAAGC > SRR4302535.363684/1‑94 (MQ=60)
CTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCG > SRR4302535.3531943/1‑94 (MQ=60)
CTTCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCG > SRR4302535.278558/1‑94 (MQ=60)
TCGGCAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGGTGCCTCCGCAGCGCGCTGGGTAAAGGGCG > SRR4302535.129182/1‑94 (MQ=60)
CGGCAAGCTCTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGT < SRR4302535.4356583/94‑1 (MQ=60)
GCAAGCTCTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTCAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGG < SRR4302535.4343239/94‑1 (MQ=60)
CAAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGC > SRR4302535.1884642/1‑94 (MQ=60)
AAGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCT < SRR4302535.4416691/94‑1 (MQ=60)
AGCACTGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTT < SRR4302535.3196133/94‑1 (MQ=60)
TGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACG > SRR4302535.1515997/1‑94 (MQ=60)
TGGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACG < SRR4302535.3931478/94‑1 (MQ=60)
GGCAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCTGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGC < SRR4302535.4600689/94‑1 (MQ=60)
CAACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCAGATACGCGGACTCGGCCGCGCGCTGGGcacagcgcgcagcttcacaccgt > SRR4302535.422300/1‑71 (MQ=60)
AACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTT > SRR4302535.3149503/1‑94 (MQ=60)
AACCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTT > SRR4302535.4271398/1‑94 (MQ=60)
CCGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCA < SRR4302535.1671479/94‑1 (MQ=60)
CGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGTGTAAAGCGCGTGGCTTCCACGCGTTCAG < SRR4302535.1384478/94‑1 (MQ=60)
CGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAG > SRR4302535.2890557/1‑94 (MQ=60)
CGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAG < SRR4302535.709140/94‑1 (MQ=60)
CGGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAG < SRR4302535.3838234/94‑1 (MQ=60)
GGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGC > SRR4302535.368357/1‑94 (MQ=60)
GGGCTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGC < SRR4302535.3680204/94‑1 (MQ=60)
CTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTG < SRR4302535.1009126/94‑1 (MQ=60)
CTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTG > SRR4302535.2403165/1‑94 (MQ=60)
CTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGCCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTG < SRR4302535.2529604/94‑1 (MQ=60)
CTTCGGCGGCCTGTAAGCGGCTGGTTAAGCCCCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTG > SRR4302535.4484346/1‑94 (MQ=60)
TTGGGCGGCCTGTAAGCGGCTGGGTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGC < SRR4302535.4240941/94‑1 (MQ=60)
CGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGCAT > SRR4302535.4361520/1‑94 (MQ=60)
CGGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGCAT > SRR4302535.4640145/1‑94 (MQ=60)
GGCGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGCATT > SRR4302535.996585/1‑94 (MQ=60)
CGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGCATTTC > SRR4302535.2109541/1‑94 (MQ=60)
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CGATTTCATCAACTGAATGCTTTGGATCACCCGGCGGCTGTCCAGCATCAGTAATGACATCTCTTCGGCAAGCACTGGCAACCGGGCTTCGGTGGCCTGTAAGCGGCTGGTTAAGCCGCGCTGATAGGCGGCCTCGGCAGCGCGCTGGGTAAAGCGCGTGGCTTCCACGCGTTCAGCCTGCATTTC > NC_000913/4297188‑4297373
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
