Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,385,717 |
T→C |
N411S (AAC→AGC) |
yjeP ← |
putative periplasmic binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,385,717 | 0 | T | C | 100.0%
| 653.3
/ NA
| 203 | N411S (AAC→AGC) | yjeP | putative periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (90/113); total (90/113) |
Only 100 of 207 total aligned reads displayed.
GCGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGTTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTGT > NC_000913/4385627‑4385806
|
cGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTgg < 1:4320114/93‑1 (MQ=255)
gATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGga < 1:105274/93‑1 (MQ=255)
gATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGga < 2:103407/93‑1 (MQ=255)
gATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGga > 1:1820864/1‑93 (MQ=255)
aTGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGgag > 2:4572660/1‑93 (MQ=255)
ggTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCCCCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGAc < 1:683696/93‑1 (MQ=255)
ggTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGAc > 2:680261/1‑93 (MQ=255)
cATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTTCTTCGTTCCCCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACttt < 2:2349133/93‑1 (MQ=255)
cATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACttt < 2:1492928/93‑1 (MQ=255)
cATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACttt < 1:2806556/93‑1 (MQ=255)
aTCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTc < 2:1841098/93‑1 (MQ=255)
aTCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTc < 2:648772/93‑1 (MQ=255)
tCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATGCTCCAGTTGCCCGCTGGAGACTTTCa > 2:3794029/1‑93 (MQ=255)
tCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCa < 2:137105/93‑1 (MQ=255)
tCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCa < 2:2923443/93‑1 (MQ=255)
tCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCa > 1:875987/1‑93 (MQ=255)
gggCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGc < 2:3750290/93‑1 (MQ=255)
gggCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGc > 2:1682895/1‑93 (MQ=255)
ggCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCt < 1:1287022/93‑1 (MQ=255)
gcgcgcGTCATAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCCCCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCtt < 2:1842190/93‑1 (MQ=255)
gcgcACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCtt < 1:1572031/93‑1 (MQ=255)
gcgcACGTCAGAGGTCCAGAACAGATAGCGGCGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCtt < 1:4162589/93‑1 (MQ=255)
gcACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTgg > 2:1555751/1‑93 (MQ=255)
aCGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTc < 1:2507585/93‑1 (MQ=255)
tCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGt > 2:1630289/1‑93 (MQ=255)
cAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGtt < 1:2135708/93‑1 (MQ=255)
agagGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTc > 2:546633/1‑93 (MQ=255)
agagGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTc > 1:3341045/1‑93 (MQ=255)
gagGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTcc > 1:729944/1‑93 (MQ=255)
agGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCa > 2:1469719/1‑93 (MQ=255)
cAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAtagt < 1:3153677/93‑1 (MQ=255)
cAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAtagt > 2:2826309/1‑93 (MQ=255)
gAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAtagtag > 2:1398346/1‑93 (MQ=255)
gAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAtagtag < 1:2023569/93‑1 (MQ=255)
aCAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCg < 1:4072670/93‑1 (MQ=255)
cAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCgt > 1:48202/1‑93 (MQ=255)
aGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCgtg < 1:1212792/93‑1 (MQ=255)
gATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCgtgt > 1:3081609/1‑93 (MQ=255)
aTAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTc < 1:3264575/93‑1 (MQ=255)
aTAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTc < 1:3409436/93‑1 (MQ=255)
aTAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTc > 1:1686341/1‑93 (MQ=255)
aTAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTc < 2:3512071/93‑1 (MQ=255)
tAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCg > 2:779562/1‑93 (MQ=255)
ggTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCAc < 1:394824/93‑1 (MQ=255)
ggTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCAc < 2:2012245/93‑1 (MQ=255)
tGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCAccc < 2:725345/93‑1 (MQ=255)
tGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCAccc < 2:2363819/93‑1 (MQ=255)
tGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCAccc < 1:3780434/93‑1 (MQ=255)
tGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCAccc < 1:1894368/93‑1 (MQ=255)
tGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCAccc < 2:2945695/93‑1 (MQ=255)
tGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTAAGTTCCAATAGTAGCGTGTCGCCAccc < 2:2149902/93‑1 (MQ=255)
tcGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCt < 1:2303001/92‑1 (MQ=255)
gCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCt < 2:4529567/93‑1 (MQ=255)
gTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGc > 1:1934939/1‑93 (MQ=255)
ttccTTCGTTCCCCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGca < 2:3849626/90‑1 (MQ=255)
ttGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGca > 2:1644721/1‑93 (MQ=255)
ttGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGca > 1:1400456/1‑93 (MQ=255)
ttcgttcgCCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGcaacaa < 2:34743/93‑1 (MQ=255)
ttCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGcaacaa > 2:2493120/1‑93 (MQ=255)
ttCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGcaacaa > 1:2894138/1‑93 (MQ=255)
ttCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACACTGcaacaa > 1:2483294/1‑93 (MQ=255)
tCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAAt < 2:4587868/93‑1 (MQ=255)
tCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAAt < 1:1817165/93‑1 (MQ=255)
cGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATg < 2:2519284/93‑1 (MQ=255)
gTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGa < 1:2944570/93‑1 (MQ=255)
ttCACCTCTTTCAGCGCATCCTCCAGTTGCCGGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAg < 1:3581148/93‑1 (MQ=255)
tCACCTCTTTCAGCGCATCCTCCAGTTGCTCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGt < 1:2383218/93‑1 (MQ=255)
tCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGt < 2:1216047/93‑1 (MQ=255)
tCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGt < 2:3618337/93‑1 (MQ=255)
tCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGt > 1:1901478/1‑93 (MQ=255)
tCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGt > 1:274882/1‑93 (MQ=255)
tCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGt < 2:4471385/93‑1 (MQ=255)
cACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGtt < 1:1370974/93‑1 (MQ=255)
aCCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTc < 2:100858/93‑1 (MQ=255)
aCCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTc > 2:3979022/1‑93 (MQ=255)
ccTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCa > 2:2193940/1‑93 (MQ=255)
ccTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCa < 1:4022395/93‑1 (MQ=255)
ccTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCa < 2:3632538/93‑1 (MQ=255)
tctTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGc < 1:4231954/93‑1 (MQ=255)
tctTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGc > 1:4454264/1‑93 (MQ=255)
cAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTc < 1:2633747/93‑1 (MQ=255)
gcgcATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCAc > 2:2402242/1‑93 (MQ=255)
gcgcATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCAc < 1:3008172/93‑1 (MQ=255)
gcgcATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCAc < 1:2865559/93‑1 (MQ=255)
gcgcATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCAc > 2:4178938/1‑93 (MQ=255)
tcctccAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACNCACGCTGa > 2:4343663/1‑93 (MQ=255)
ccAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTgc < 2:2130469/93‑1 (MQ=255)
ccAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTgc > 2:4036220/1‑93 (MQ=255)
ccAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTgc > 2:3307469/1‑93 (MQ=255)
cAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTgcg > 2:4294794/1‑93 (MQ=255)
cAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTgcg < 2:200396/93‑1 (MQ=255)
gTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCa < 1:1964393/93‑1 (MQ=255)
ttGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAg > 1:253192/1‑93 (MQ=255)
tGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGt < 1:4182005/93‑1 (MQ=255)
tGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGt < 1:1526539/93‑1 (MQ=255)
tGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGt < 1:4656840/93‑1 (MQ=255)
gCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGtt < 1:2706951/93‑1 (MQ=255)
cccGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCAGAGTGCGCAGTtg > 1:2679827/1‑93 (MQ=255)
ccGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTtgt < 2:3111966/93‑1 (MQ=255)
ccGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTtgt < 2:3195661/93‑1 (MQ=255)
|
GCGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGTTGGAGACTTTCAGCTTGGTCAGTTCCAATAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTGT > NC_000913/4385627‑4385806
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGGCGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGTTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTGTGCTT > NC_000913/4385624‑4385810
|
CAGGCGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGC > SRR4302535.354299/1‑94 (MQ=60)
CAGGCGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGC > SRR4302535.4202066/1‑94 (MQ=60)
AGGCGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCT > SRR4302535.4510642/1‑94 (MQ=60)
GGCGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTG < SRR4302535.2033856/94‑1 (MQ=60)
CGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGGCCGCTGGA > SRR4302535.4065852/1‑94 (MQ=60)
CGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGA > SRR4302535.1834020/1‑94 (MQ=60)
CGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGA < SRR4302535.4349666/94‑1 (MQ=60)
GATGTTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAG < SRR4302535.2548032/94‑1 (MQ=60)
GATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAG < SRR4302535.106021/94‑1 (MQ=60)
ATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGA > SRR4302535.4294049/1‑94 (MQ=60)
TGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGAC < SRR4302535.314392/94‑1 (MQ=60)
GGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCCCCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACT < SRR4302535.688481/94‑1 (MQ=60)
GTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTT > SRR4302535.47261/1‑94 (MQ=60)
GTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTT < SRR4302535.293012/94‑1 (MQ=60)
GCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTT < SRR4302535.2864394/94‑1 (MQ=60)
CATCGGGCGCCCGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTC > SRR4302535.2717385/1‑94 (MQ=60)
CATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTC < SRR4302535.2826508/94‑1 (MQ=60)
CATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTC > SRR4302535.762341/1‑94 (MQ=60)
ATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCA > SRR4302535.882192/1‑94 (MQ=60)
ATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCA < SRR4302535.1672792/94‑1 (MQ=60)
GGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCT > SRR4302535.3999244/1‑94 (MQ=60)
GGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTT < SRR4302535.1296192/94‑1 (MQ=60)
GGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTT < SRR4302535.2975663/94‑1 (MQ=60)
GCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTG < SRR4302535.1583378/94‑1 (MQ=60)
GCGCACGTCAGAGGTCCAGAACAGATAGCGGCGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTG < SRR4302535.4191081/94‑1 (MQ=60)
ACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCA < SRR4302535.2525662/94‑1 (MQ=60)
CGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAG < SRR4302535.1987314/94‑1 (MQ=60)
GTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGT < SRR4302535.3782596/94‑1 (MQ=60)
GTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGT > SRR4302535.2780480/1‑94 (MQ=60)
TCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTT < SRR4302535.417145/94‑1 (MQ=60)
CAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTC > SRR4302535.3364322/1‑94 (MQ=60)
CAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTC > SRR4302535.1359394/1‑94 (MQ=60)
CAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTC < SRR4302535.2151096/94‑1 (MQ=60)
AGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCC > SRR4302535.735068/1‑94 (MQ=60)
AGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCC > SRR4302535.4582631/1‑94 (MQ=60)
CCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGT < SRR4302535.3834409/94‑1 (MQ=60)
CAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTA < SRR4302535.2124121/94‑1 (MQ=60)
CAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTA < SRR4302535.3175587/94‑1 (MQ=60)
AGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAG > SRR4302535.948732/1‑94 (MQ=60)
GAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGC < SRR4302535.2038153/94‑1 (MQ=60)
AACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCG > SRR4302535.3271159/1‑94 (MQ=60)
ACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGT > SRR4302535.48563/1‑94 (MQ=60)
ACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGT < SRR4302535.4100540/94‑1 (MQ=60)
CAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTG < SRR4302535.3290783/94‑1 (MQ=60)
CAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTG > SRR4302535.2892847/1‑94 (MQ=60)
CAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTG > SRR4302535.2338512/1‑94 (MQ=60)
AGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGT < SRR4302535.1221493/94‑1 (MQ=60)
AGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGT > SRR4302535.3103088/1‑94 (MQ=60)
GATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTC > SRR4302535.1698550/1‑94 (MQ=60)
ATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCG < SRR4302535.3433162/94‑1 (MQ=60)
ATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCG < SRR4302535.3287247/94‑1 (MQ=60)
AGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCC > SRR4302535.1902049/1‑94 (MQ=60)
CGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCAC < SRR4302535.3414753/94‑1 (MQ=60)
CGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCAC < SRR4302535.4207324/94‑1 (MQ=60)
GGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACC < SRR4302535.397581/94‑1 (MQ=60)
TGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCT < SRR4302535.1908004/94‑1 (MQ=60)
TGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCT < SRR4302535.3806526/94‑1 (MQ=60)
TCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTG < SRR4302535.2319478/94‑1 (MQ=60)
CGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGC > SRR4302535.2698090/1‑94 (MQ=60)
CGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGC > SRR4302535.1948875/1‑94 (MQ=60)
GTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCA > SRR4302535.629597/1‑94 (MQ=60)
GTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCA > SRR4302535.1410452/1‑94 (MQ=60)
TTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAA > SRR4302535.4415820/1‑94 (MQ=60)
TGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGCGTCGCCAACCTGCAAC > SRR4302535.1965424/1‑94 (MQ=60)
GCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACA > SRR4302535.2512832/1‑94 (MQ=60)
CTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAA > SRR4302535.2914608/1‑94 (MQ=60)
CTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAA > SRR4302535.2993568/1‑94 (MQ=60)
CTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACACTGCAACAA > SRR4302535.2501199/1‑94 (MQ=60)
TCGTTCACCTCTTTCAGCGCATCCTGCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATG < SRR4302535.3163672/94‑1 (MQ=60)
TCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATG < SRR4302535.1830297/94‑1 (MQ=60)
GTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAG > SRR4302535.1257391/1‑94 (MQ=60)
GTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAG < SRR4302535.2965268/94‑1 (MQ=60)
TTCACCTCTTTCAGCGCATCCTCCAGTTGCCGGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGT < SRR4302535.3605987/94‑1 (MQ=60)
TTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGT > SRR4302535.276795/1‑94 (MQ=60)
TTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGT < SRR4302535.255578/94‑1 (MQ=60)
TTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGT > SRR4302535.1915163/1‑94 (MQ=60)
TCACCTCTTTCAGCGCATCCTCCAGTTGCTCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTT < SRR4302535.2400332/94‑1 (MQ=60)
TCACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACGCTGCAACAATGAGTT > SRR4302535.2270628/1‑94 (MQ=60)
CACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTC < SRR4302535.2494777/94‑1 (MQ=60)
CACCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTC < SRR4302535.1380769/94‑1 (MQ=60)
CCTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAG < SRR4302535.4049916/94‑1 (MQ=60)
CTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGC > SRR4302535.4484812/1‑94 (MQ=60)
CTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGC > SRR4302535.1106596/1‑94 (MQ=60)
CTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGC > SRR4302535.3032760/1‑94 (MQ=60)
CTCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGC > SRR4302535.2093166/1‑94 (MQ=60)
TCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCA < SRR4302535.1382689/94‑1 (MQ=60)
TCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCA > SRR4302535.1516207/1‑94 (MQ=60)
TCTTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCA < SRR4302535.4260917/94‑1 (MQ=60)
TTTCAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAAC > SRR4302535.1579992/1‑94 (MQ=60)
CAGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCA < SRR4302535.2652620/94‑1 (MQ=60)
AGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCAC < SRR4302535.1945603/94‑1 (MQ=60)
AGCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCAC < SRR4302535.3486449/94‑1 (MQ=60)
GCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACG < SRR4302535.3029243/94‑1 (MQ=60)
GCGCATCCTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACG < SRR4302535.2885859/94‑1 (MQ=60)
CTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTG > SRR4302535.1714391/1‑94 (MQ=60)
CTCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTG > SRR4302535.2737594/1‑94 (MQ=60)
TCCAGTTGCCCGCTGGAGGCTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCCCCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGC < SRR4302535.713893/94‑1 (MQ=60)
TCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGC < SRR4302535.1833228/94‑1 (MQ=60)
TCCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGC < SRR4302535.4306232/94‑1 (MQ=60)
CCAGTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCG < SRR4302535.4234825/94‑1 (MQ=60)
GTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAG > SRR4302535.254938/1‑94 (MQ=60)
GTTGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAG < SRR4302535.1978555/94‑1 (MQ=60)
TGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTT < SRR4302535.1537539/94‑1 (MQ=60)
TGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTT < SRR4302535.4688351/94‑1 (MQ=60)
TGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTT < SRR4302535.4210620/94‑1 (MQ=60)
TGCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTT > SRR4302535.1911601/1‑94 (MQ=60)
GCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTG < SRR4302535.2726295/94‑1 (MQ=60)
GCCCGCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCAGAGTGCGCAGTTG > SRR4302535.2698998/1‑94 (MQ=60)
CGCTGGAGACTTTCAGCTTGGTCAGTTCCAATAAGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTGTG > SRR4302535.4192026/1‑94 (MQ=60)
GCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTGTGCT < SRR4302535.1867785/94‑1 (MQ=60)
GCTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTGTGCT < SRR4302535.320736/94‑1 (MQ=60)
CTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTGTGCTT < SRR4302535.960093/94‑1 (MQ=60)
CTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTGTGCTT > SRR4302535.3562119/1‑94 (MQ=60)
CTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTGTGCTT > SRR4302535.2892858/1‑94 (MQ=60)
CTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGATGTGCTT > SRR4302535.3975376/1‑94 (MQ=60)
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CAGGCGATGGTCATCGGGCGCACGTCAGAGGTCCAGAACAGATAGCGGTGCGTTGCTTCGTTCACCTCTTTCAGCGCATCCTCCAGTTGCCCGTTGGAGACTTTCAGCTTGGTCAGTTCCAAT‑AGTAGCGTGTCGCCACCCTGCAACAATGAGTTCAGCAACTCACGCTGAGTGCGCAGTTGTGCTT > NC_000913/4385624‑4385810
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
