Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,443,236 |
A→G |
P516P (CCA→CCG) |
ytfN → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,443,236 | 0 | A | G | 99.6%
| 702.3
/ NA
| 225 | P516P (CCA→CCG) | ytfN | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (121/103); minor base T (1/0); total (122/103) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 234 total aligned reads displayed.
GGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGC > NC_000913/4443146‑4443325
|
ggAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCggg > 1:594820/1‑93 (MQ=255)
gAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCgggt < 1:167539/93‑2 (MQ=255)
gAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCgggg < 1:3729609/93‑1 (MQ=255)
gTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCt > 1:1250170/1‑93 (MQ=255)
gTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCt > 1:4048692/1‑93 (MQ=255)
gAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCa > 2:4084085/1‑93 (MQ=255)
aGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATc < 1:891972/93‑1 (MQ=255)
aGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATc < 1:1953508/93‑1 (MQ=255)
aCCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGaa > 1:3126703/1‑93 (MQ=255)
aCCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGaa > 2:914815/1‑93 (MQ=255)
ccGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAAc > 2:4440798/1‑93 (MQ=255)
ccGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAAc > 2:4280186/1‑93 (MQ=255)
ggTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTc > 1:4627224/1‑93 (MQ=255)
gTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATTATCCCGGGGCTTCATCTGGAACTCg > 1:4335018/1‑93 (MQ=255)
gTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCg < 1:115606/93‑1 (MQ=255)
tAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCgg < 1:1057390/93‑1 (MQ=255)
tAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCgg < 2:2600039/93‑1 (MQ=255)
tAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCgg > 1:160496/1‑93 (MQ=255)
aaCGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCggg < 2:3858439/93‑1 (MQ=255)
aagTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGc > 2:2947441/3‑93 (MQ=255)
aCGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGc < 2:101192/93‑1 (MQ=255)
gTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCa > 2:3558052/1‑93 (MQ=255)
ttAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCaa > 1:3069714/1‑93 (MQ=255)
aaaCAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAAc > 2:4376618/1‑93 (MQ=255)
aaCAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACa < 1:2390618/93‑1 (MQ=255)
aaCAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACa < 1:3099397/93‑1 (MQ=255)
aCAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAg > 2:1259506/1‑93 (MQ=255)
aCAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAg > 1:154996/1‑93 (MQ=255)
cAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGt < 1:2598139/93‑1 (MQ=255)
cAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGt < 1:1813314/93‑1 (MQ=255)
cAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGt < 2:329828/93‑1 (MQ=255)
gAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGc < 2:3277920/93‑1 (MQ=255)
gAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGc < 2:301225/93‑1 (MQ=255)
gAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGc > 2:3441655/1‑93 (MQ=255)
aaCAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGcc > 1:3988322/1‑93 (MQ=255)
aaGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAg > 2:2929753/1‑93 (MQ=255)
aaGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAg < 1:1790008/93‑1 (MQ=255)
aaGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAg > 1:3795525/1‑93 (MQ=255)
aGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGt > 1:647743/1‑93 (MQ=255)
aGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGt < 1:1027418/93‑1 (MQ=255)
gTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTg < 2:1605348/93‑1 (MQ=255)
gAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGTTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGaa > 1:2591365/1‑93 (MQ=255)
gAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGaa < 2:2046245/93‑1 (MQ=255)
gAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGaa > 2:506879/1‑93 (MQ=255)
aaCGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGaaa > 1:3932007/1‑93 (MQ=255)
aCGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAg > 2:1910772/1‑93 (MQ=255)
aCGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAg < 2:2670413/93‑1 (MQ=255)
cGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAgg < 1:2678884/93‑1 (MQ=255)
gTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGc > 2:132293/1‑93 (MQ=255)
gTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGc < 2:4562782/93‑1 (MQ=255)
ttGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCg > 1:1288873/1‑93 (MQ=255)
tGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATAATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGa < 1:1708404/93‑1 (MQ=255)
gACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAg > 2:2489786/1‑93 (MQ=255)
aCGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGGGAGc > 2:1542400/1‑93 (MQ=255)
aCGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGc < 1:3510498/93‑1 (MQ=255)
ggCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTg < 2:4508293/93‑1 (MQ=255)
ggCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTg < 1:3679825/93‑1 (MQ=255)
cACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTggg < 2:1828279/93‑1 (MQ=255)
aCGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACCGTGCCGAAGTGAAAGGCGAGCTgggg > 2:3607547/1‑93 (MQ=255)
cGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTggggg > 1:1398356/1‑93 (MQ=255)
gCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTggggga > 2:1743704/1‑92 (MQ=255)
cTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTggcggga > 1:2908509/1‑91 (MQ=255)
tGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGCAGTGAAAGGCGAGCTGGGGGTaa > 1:2791321/1‑93 (MQ=255)
tGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTaa > 1:1071560/1‑93 (MQ=255)
gAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTaaa > 2:3954953/1‑93 (MQ=255)
gAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTaaa < 1:3213229/93‑1 (MQ=255)
gAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTaaa > 2:1914664/1‑93 (MQ=255)
gAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTaaa < 1:2108297/93‑1 (MQ=255)
aaaGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTGATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTaaaa < 1:4273749/93‑1 (MQ=255)
aaaGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTaaaa < 2:4501106/93‑1 (MQ=255)
aGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGa > 1:505414/1‑93 (MQ=255)
aGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGa > 2:2977865/1‑93 (MQ=255)
ggCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGAt > 1:3417331/1‑93 (MQ=255)
ggCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGAt > 2:3591268/1‑93 (MQ=255)
ggCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGAt < 2:3396962/93‑1 (MQ=255)
agCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGAt < 1:1916724/92‑1 (MQ=255)
gCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGAtc < 2:543081/93‑1 (MQ=255)
cAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGAtct < 2:3721468/93‑1 (MQ=255)
aaCAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGAtctc > 1:754533/1‑93 (MQ=255)
aaCAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGAtctc < 2:4115104/93‑1 (MQ=255)
aGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAAt > 1:363583/1‑93 (MQ=255)
gTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTACAAGATCTCAATc < 2:3757580/93‑1 (MQ=255)
ttATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCt > 1:1986860/1‑93 (MQ=255)
ttATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGAGAGCTGGGGGTAAAAGATCTCAATCt > 1:819939/1‑93 (MQ=255)
atatGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTg < 2:2761205/93‑1 (MQ=255)
tatGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGa < 2:4057071/93‑1 (MQ=255)
tatGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGCGAAAAAGATCTCAATCTTGa < 2:4310320/93‑1 (MQ=255)
tGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATg > 2:2127012/1‑93 (MQ=255)
tGCAGTGGATGATCCCGGGGCTTCATCCGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATg < 1:3269697/93‑1 (MQ=255)
cAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGcc > 2:1972062/1‑93 (MQ=255)
aGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGcca < 1:3023357/93‑1 (MQ=255)
gTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGccac > 2:2566163/1‑93 (MQ=255)
gTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGccac > 1:3428046/1‑93 (MQ=255)
tGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGccacc > 1:1331560/1‑93 (MQ=255)
atgatCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATc > 2:600300/1‑93 (MQ=255)
gatCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCaa < 2:3218673/93‑1 (MQ=255)
atCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAAc < 2:3689454/93‑1 (MQ=255)
atCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAAc < 2:2682269/93‑1 (MQ=255)
atCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAAc < 2:935344/93‑1 (MQ=255)
cccGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAAcgc < 2:1401482/93‑1 (MQ=255)
|
GGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGC > NC_000913/4443146‑4443325
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCG > NC_000913/4443143‑4443329
|
GCCGGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCG < SRR4302535.2764936/94‑1 (MQ=60)
CCGGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGG < SRR4302535.1321049/94‑1 (MQ=60)
CGGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGG < SRR4302535.1973127/94‑1 (MQ=60)
CGGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGG < SRR4302535.46088/94‑1 (MQ=60)
CGGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGG > SRR4302535.598989/1‑94 (MQ=60)
GAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGC < SRR4302535.3755437/94‑1 (MQ=60)
GAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGC > SRR4302535.578563/1‑94 (MQ=60)
AGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCT > SRR4302535.4076404/1‑94 (MQ=60)
AGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCT > SRR4302535.1259096/1‑94 (MQ=60)
GTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTT > SRR4302535.827283/1‑94 (MQ=60)
GTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTT > SRR4302535.1813639/1‑94 (MQ=60)
TTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTC < SRR4302535.4637586/94‑1 (MQ=60)
GAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCAT < SRR4302535.3638726/94‑1 (MQ=60)
GAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCAT < SRR4302535.1792974/94‑1 (MQ=60)
AGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCT < SRR4302535.898292/94‑1 (MQ=60)
AGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCT < SRR4302535.1967568/94‑1 (MQ=60)
AGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCT < SRR4302535.1837138/94‑1 (MQ=60)
AGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCT > SRR4302535.1451570/1‑94 (MQ=60)
GACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAA > SRR4302535.3148479/1‑94 (MQ=60)
ACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAAC > SRR4302535.3114296/1‑94 (MQ=60)
ACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAAC > SRR4302535.10426/1‑94 (MQ=60)
CGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTC > SRR4302535.4658636/1‑94 (MQ=60)
CGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGAGGATGATCCCGGGGCTTCATCTGGAACTG > SRR4302535.628005/1‑94 (MQ=60)
GGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATTATCCCGGGGCTTCATCTGGAACTCG > SRR4302535.4364669/1‑94 (MQ=60)
GGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCG > SRR4302535.1661596/1‑94 (MQ=60)
GTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGG < SRR4302535.116418/94‑1 (MQ=60)
GTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGG > SRR4302535.161623/1‑94 (MQ=60)
GTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGG > SRR4302535.3435420/1‑94 (MQ=60)
TAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGG < SRR4302535.1064909/94‑1 (MQ=60)
ACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCC < SRR4302535.1780761/94‑1 (MQ=60)
ACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCC < SRR4302535.2257179/94‑1 (MQ=60)
ACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCC > SRR4302535.766746/1‑94 (MQ=60)
CGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCA > SRR4302535.1225392/1‑94 (MQ=60)
GTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAA > SRR4302535.3091152/1‑94 (MQ=60)
TTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAA > SRR4302535.1957936/1‑94 (MQ=60)
TTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAA > SRR4302535.2775690/1‑94 (MQ=60)
AACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAG > SRR4302535.3471816/1‑94 (MQ=60)
AACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAG < SRR4302535.3120975/94‑1 (MQ=60)
AACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAG < SRR4302535.2407806/94‑1 (MQ=60)
AACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAG < SRR4302535.4336921/94‑1 (MQ=60)
AACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAG > SRR4302535.156086/1‑94 (MQ=60)
ACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGT < SRR4302535.1377233/94‑1 (MQ=60)
CAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGTCTTCATCTGGAACTCGGGCCAAACAGTG < SRR4302535.3963680/94‑1 (MQ=60)
CAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTG < SRR4302535.1826426/94‑1 (MQ=60)
CAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTG < SRR4302535.2616799/94‑1 (MQ=60)
AGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGTAGTGGATGATCCCGGGGTGTCATCTGGGACTCGGGACAAACAGTGC > SRR4302535.107483/1‑94 (MQ=60)
GAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCC > SRR4302535.4015595/1‑94 (MQ=60)
AACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCG < SRR4302535.1985691/94‑1 (MQ=60)
AACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCG > SRR4302535.3249086/1‑94 (MQ=60)
AACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCG < SRR4302535.1566760/94‑1 (MQ=60)
CAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAA < SRR4302535.826535/94‑1 (MQ=60)
AAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAG > SRR4302535.2666409/1‑94 (MQ=60)
AAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAG < SRR4302535.107181/94‑1 (MQ=60)
AAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAG > SRR4302535.3781646/1‑94 (MQ=60)
AAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAG > SRR4302535.3821688/1‑94 (MQ=60)
AAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGT > SRR4302535.3129661/1‑94 (MQ=60)
AAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGT < SRR4302535.3024766/94‑1 (MQ=60)
AAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGT > SRR4302535.652258/1‑94 (MQ=60)
AAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGT < SRR4302535.1802956/94‑1 (MQ=60)
AGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTG < SRR4302535.1034714/94‑1 (MQ=60)
AGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTG < SRR4302535.4018141/94‑1 (MQ=60)
AGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTG < SRR4302535.2425643/94‑1 (MQ=60)
TGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGTTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAA > SRR4302535.2609973/1‑94 (MQ=60)
TGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGGCAAACAGTGCCGAAGTGAA > SRR4302535.2609975/1‑94 (MQ=60)
GAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAA < SRR4302535.4577351/94‑1 (MQ=60)
GAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAA > SRR4302535.3958848/1‑94 (MQ=60)
ACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGG > SRR4302535.604084/1‑94 (MQ=60)
ACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGG < SRR4302535.2231668/94‑1 (MQ=60)
ACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGG < SRR4302535.3445296/94‑1 (MQ=60)
CGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGC < SRR4302535.2831257/94‑1 (MQ=60)
CGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGC < SRR4302535.2698050/94‑1 (MQ=60)
CGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAAGC > SRR4302535.1957758/1‑94 (MQ=60)
CGGTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGC < SRR4302535.3566069/94‑1 (MQ=60)
GTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCG > SRR4302535.1298055/1‑94 (MQ=60)
TGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATAATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAG < SRR4302535.1720756/94‑1 (MQ=60)
ACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCT < SRR4302535.3534890/94‑1 (MQ=60)
CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGAGAGCTG > SRR4302535.1700377/1‑94 (MQ=60)
GGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGG < SRR4302535.3705292/94‑1 (MQ=60)
GGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGG < SRR4302535.3705293/94‑1 (MQ=60)
CACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGG < SRR4302535.3806742/94‑1 (MQ=60)
CACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGG > SRR4302535.1312301/1‑94 (MQ=60)
ACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGG > SRR4302535.1408337/1‑94 (MQ=60)
ACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGG > SRR4302535.128431/1‑94 (MQ=60)
ACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGG < SRR4302535.295052/94‑1 (MQ=60)
CGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGG > SRR4302535.1126237/1‑94 (MQ=60)
CGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGA > SRR4302535.3130676/1‑94 (MQ=60)
GCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGcggga > SRR4302535.2929066/1‑89 (MQ=60)
CTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGCAGTGAAAGGCGAGCTGGGGGTAA > SRR4302535.2811187/1‑94 (MQ=60)
CTGAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAA > SRR4302535.1079174/1‑94 (MQ=60)
GAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAA < SRR4302535.2123503/94‑1 (MQ=60)
GAAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAA < SRR4302535.3235482/94‑1 (MQ=60)
AAAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTGATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAG < SRR4302535.4303004/94‑1 (MQ=60)
AAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGA > SRR4302535.3401313/1‑94 (MQ=60)
AAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGA > SRR4302535.508947/1‑94 (MQ=60)
AAGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGA > SRR4302535.1126666/1‑94 (MQ=60)
AGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGAT > SRR4302535.3084008/1‑94 (MQ=60)
AGGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGAT > SRR4302535.3441103/1‑94 (MQ=60)
agcatCAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATC < SRR4302535.4714542/89‑1 (MQ=60)
AGCAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATC < SRR4302535.1930534/94‑1 (MQ=60)
CAACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTC > SRR4302535.759847/1‑94 (MQ=60)
AACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCA < SRR4302535.1302981/94‑1 (MQ=60)
AACAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCA < SRR4302535.4046643/94‑1 (MQ=60)
CAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAAT > SRR4302535.366088/1‑94 (MQ=60)
CAGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAAT < SRR4302535.3232929/94‑1 (MQ=60)
AGTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATC < SRR4302535.3941093/94‑1 (MQ=60)
GTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCT > SRR4302535.1586134/1‑94 (MQ=60)
GTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCT > SRR4302535.2001169/1‑94 (MQ=60)
GTTATATGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGAGAGCTGGGGGTAAAAGATCTCAATCT > SRR4302535.825694/1‑94 (MQ=60)
TGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGC > SRR4302535.4097226/1‑94 (MQ=60)
TGCAGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGC > SRR4302535.2068469/1‑94 (MQ=60)
TGCAGTGGATGATCCCGGGGCTTCATCCGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGC < SRR4302535.3292411/94‑1 (MQ=60)
AGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCAC < SRR4302535.3044525/94‑1 (MQ=60)
AGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCAC > SRR4302535.3451875/1‑94 (MQ=60)
AGTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGGGCCGGAGTGAAAGGCGGGCTGGGGGTAAAAGATCTCAATCTTGAGGCCAC > SRR4302535.3706061/1‑94 (MQ=60)
GTGGATGATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACC > SRR4302535.1341060/1‑94 (MQ=60)
GATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAAC < SRR4302535.66094/94‑1 (MQ=60)
GATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAAC < SRR4302535.2684955/94‑1 (MQ=60)
GATCCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAAC < SRR4302535.905297/94‑1 (MQ=60)
CCCGGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCG > SRR4302535.3968706/1‑94 (MQ=60)
GGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCG > SRR4302535.3255940/1‑94 (MQ=60)
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GCCGGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCG > NC_000913/4443143‑4443329
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
