Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,511,632 |
T→C |
Q84R (CAG→CGG) |
fecB ← |
FecB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,511,632 | 0 | T | C | 99.5%
| 613.1
/ ‑5.6
| 200 | Q84R (CAG→CGG) | fecB | FecB |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (81/118); total (82/118) |
| Fisher's exact test for biased strand distribution p-value = 4.10e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 |
Only 100 of 216 total aligned reads displayed.
CCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACTGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCG > NC_000913/4511542‑4511721
|
cccGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGc > 1:421936/1‑93 (MQ=255)
cccGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGc > 2:2208895/1‑93 (MQ=255)
cccGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGGTCCGACGGACCGc > 1:2431811/1‑93 (MQ=255)
cGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCa < 1:2803124/93‑1 (MQ=255)
gCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCAc > 1:2904065/1‑93 (MQ=255)
aTGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCATGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCGCgg > 2:1890602/1‑93 (MQ=255)
aTGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACgg > 2:1164588/1‑93 (MQ=255)
aTGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACgg > 2:1707469/1‑93 (MQ=255)
tGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGt > 1:3968254/1‑93 (MQ=255)
ggCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGtt < 1:3820524/93‑1 (MQ=255)
gACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCa < 2:2326910/93‑1 (MQ=255)
gACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCa < 2:821864/93‑1 (MQ=255)
gACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCa < 1:2177619/93‑1 (MQ=255)
gACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCa < 1:2479719/93‑1 (MQ=255)
aCTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAg < 2:458224/93‑1 (MQ=255)
ctgctgTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAgg < 1:2581152/93‑1 (MQ=255)
ctgctgTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGCTTCAgg > 2:2396968/1‑93 (MQ=255)
tgctgTCGGCAATGATCGGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGt > 2:3039891/1‑93 (MQ=255)
ctgTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTgc < 2:1858747/93‑1 (MQ=255)
gTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGGTTCAGGTgggc > 2:3955824/1‑93 (MQ=255)
cGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGGCCGCCACGGTTTCTGGTGcgcac > 1:1589521/1‑93 (MQ=255)
gCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGcgcacgc > 2:1357405/1‑93 (MQ=255)
cAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGcgcacgca < 1:4431636/93‑1 (MQ=255)
aaTGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCgcacgcac > 2:4003495/1‑93 (MQ=255)
aaTGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCgcacgcac > 1:1068847/1‑93 (MQ=255)
aTGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACt > 1:3140231/1‑93 (MQ=255)
aTGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACt > 2:2928412/1‑93 (MQ=255)
tGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACtt > 2:3286279/1‑93 (MQ=255)
gATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTc < 2:2088542/93‑1 (MQ=255)
tCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCgg > 2:1140454/1‑93 (MQ=255)
tCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCgg > 1:1265412/1‑93 (MQ=255)
tCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCgg < 2:3622581/93‑1 (MQ=255)
tCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCCCACGCACTTCgg > 2:570296/1‑93 (MQ=255)
ggTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCa < 1:1983468/93‑1 (MQ=255)
ggTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGGTTCAGGTGCGCACGCACTTCGGGCa > 1:102349/1‑93 (MQ=255)
gTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAg < 1:3842337/93‑1 (MQ=255)
tCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAgg > 2:4171361/1‑93 (MQ=255)
tGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCCGGAt > 1:4126624/1‑93 (MQ=255)
tGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGAt < 2:1407920/93‑1 (MQ=255)
tGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGAt > 2:2625475/1‑93 (MQ=255)
ggTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATg < 2:4087983/93‑1 (MQ=255)
gTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGc < 2:3129570/93‑1 (MQ=255)
tCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGtt < 1:2497049/93‑1 (MQ=255)
cAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCTGGCAGGATGGGttt > 1:2901018/1‑93 (MQ=255)
agagCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACTGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGtttt < 1:1245564/93‑1 (MQ=255)
gCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCa < 1:34807/93‑1 (MQ=255)
gCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCa < 2:2948765/93‑1 (MQ=255)
cGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCAt < 2:4479207/93‑1 (MQ=255)
ggCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATc < 2:515995/93‑1 (MQ=255)
gCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCg > 2:3207665/1‑93 (MQ=255)
cAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGt < 1:3567161/93‑1 (MQ=255)
aaTGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGtt < 1:3383003/93‑1 (MQ=255)
aTGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTa > 1:2130406/1‑93 (MQ=255)
aTGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTa > 1:2875695/1‑93 (MQ=255)
aTGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTa < 2:4377069/93‑1 (MQ=255)
aTGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTa > 1:2303753/1‑93 (MQ=255)
tGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAt < 2:3731883/93‑1 (MQ=255)
tGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAt < 1:3599903/93‑1 (MQ=255)
ggCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtc < 1:148075/93‑1 (MQ=255)
ggCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtc < 1:2718444/93‑1 (MQ=255)
gCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGGTTTAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcg > 2:1855593/1‑93 (MQ=255)
cTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgt < 2:1235824/93‑1 (MQ=255)
cTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgt < 2:3883786/93‑1 (MQ=255)
cTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgt < 1:4296807/93‑1 (MQ=255)
ttCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgtc < 2:3946862/93‑1 (MQ=255)
ttCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgtc > 2:2427240/1‑93 (MQ=255)
tCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAtcgtcg > 1:693620/1‑93 (MQ=255)
cAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGc > 1:930630/1‑93 (MQ=255)
ggCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCaa > 2:3810844/1‑93 (MQ=255)
ggCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCaa < 1:1766951/93‑1 (MQ=255)
gCTCGGCTGCGCGCGCGTTCCGACGGACCTCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAAt < 1:402544/93‑1 (MQ=255)
gCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAAt < 1:2646430/93‑1 (MQ=255)
gCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGa < 1:4578166/93‑1 (MQ=255)
gCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGa < 1:3785814/93‑1 (MQ=255)
cTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGAt < 2:1975568/93‑1 (MQ=255)
cTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGAt < 2:1639121/93‑1 (MQ=255)
cTGCGCGCGCGGTCCGATGGACCGCCACGGTTTCAGGTGCTCACGCACTTCGGGCAGGATGCGTTGTGTATCGTTATCGTCGGCAATACCGAt < 2:3481276/93‑1 (MQ=255)
tGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATAGCGAtt > 2:3243662/1‑92 (MQ=255)
tGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATc > 1:875922/1‑93 (MQ=255)
tGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATc > 1:3102648/1‑93 (MQ=255)
cgcgcgcgcGTTCCGACGCACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATc < 2:2447140/92‑1 (MQ=255)
cgcgcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCgg > 1:4502395/1‑93 (MQ=255)
cgcgcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCgg < 1:3197851/93‑1 (MQ=255)
gcgcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCggg < 1:1376268/93‑1 (MQ=255)
cgcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGa < 2:883302/93‑1 (MQ=255)
cgcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGa < 1:72921/93‑1 (MQ=255)
cgcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGa > 1:275989/1‑93 (MQ=255)
gcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGAt < 2:3421069/93‑1 (MQ=255)
gcgcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGAt < 2:500785/93‑1 (MQ=255)
gcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGa < 2:2721128/93‑1 (MQ=255)
gcgTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGa < 2:723504/93‑1 (MQ=255)
ttCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGt < 1:1029743/93‑1 (MQ=255)
tCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTc < 1:625008/93‑1 (MQ=255)
ccGACGGACCGCCACGGTTTCAGGTTCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTcc > 2:2540453/1‑93 (MQ=255)
ccGACGGACCGCCACGGTTTCAGGTGCGCACGCACTCCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTcc > 2:3526145/1‑93 (MQ=255)
gACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAc < 1:555050/93‑1 (MQ=255)
gACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAc < 1:184145/93‑1 (MQ=255)
ggACTGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAcggc > 1:496365/1‑93 (MQ=255)
ggACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAcggc < 2:1454500/93‑1 (MQ=255)
gACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAcggcg > 2:136442/1‑93 (MQ=255)
|
CCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACTGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCG > NC_000913/4511542‑4511721
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACTGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCGG > NC_000913/4511539‑4511722
|
ACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACC > SRR4302535.1583630/1‑94 (MQ=60)
ACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACC < SRR4302535.3681763/94‑1 (MQ=60)
CCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGC > SRR4302535.424882/1‑94 (MQ=60)
CCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGC > SRR4302535.3356243/1‑94 (MQ=60)
CCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGC > SRR4302535.919087/1‑94 (MQ=60)
CCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGGTCCGACGGACCGC > SRR4302535.2449332/1‑94 (MQ=60)
CGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCAC < SRR4302535.2823059/94‑1 (MQ=60)
CGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCAC > SRR4302535.2924593/1‑94 (MQ=60)
CGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCAC > SRR4302535.2924594/1‑94 (MQ=60)
GCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACG > SRR4302535.4361943/1‑94 (MQ=60)
ATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGT > SRR4302535.3995357/1‑94 (MQ=60)
GGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCTCCACGGTTT < SRR4302535.289652/94‑1 (MQ=60)
GGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTT < SRR4302535.3846883/94‑1 (MQ=60)
GGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTT < SRR4302535.1032031/94‑1 (MQ=60)
CGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCA < SRR4302535.2151279/94‑1 (MQ=60)
GACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAG < SRR4302535.2497601/94‑1 (MQ=60)
GACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAG < SRR4302535.2193175/94‑1 (MQ=60)
GACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAG > SRR4302535.149890/1‑94 (MQ=60)
CTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGT < SRR4302535.1569443/94‑1 (MQ=60)
CTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGT < SRR4302535.2599693/94‑1 (MQ=60)
GCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGC < SRR4302535.2607422/94‑1 (MQ=60)
CTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCG > SRR4302535.250797/1‑94 (MQ=60)
CTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCG > SRR4302535.3548441/1‑94 (MQ=60)
TCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGGCCGCCACGGTTTCTGGTGCGCAC > SRR4302535.1600994/1‑94 (MQ=60)
CGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACG > SRR4302535.2669302/1‑94 (MQ=60)
GGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGC < SRR4302535.4234078/94‑1 (MQ=60)
CAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCAC < SRR4302535.4462002/94‑1 (MQ=60)
CAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCAC > SRR4302535.1076445/1‑94 (MQ=60)
AATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACT > SRR4302535.3162081/1‑94 (MQ=60)
ATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTT > SRR4302535.4483617/1‑94 (MQ=60)
TGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTC < SRR4302535.1055303/94‑1 (MQ=60)
TGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTC < SRR4302535.2454646/94‑1 (MQ=60)
ATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGG > SRR4302535.2318829/1‑94 (MQ=60)
ATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGG > SRR4302535.1274463/1‑94 (MQ=60)
TCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCAGTTCGGG > SRR4302535.3840537/1‑94 (MQ=60)
CAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGC > SRR4302535.3191966/1‑94 (MQ=60)
AGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCA > SRR4302535.497102/1‑94 (MQ=60)
AGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCA > SRR4302535.3861156/1‑94 (MQ=60)
AGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGGTTCAGGTGCGCACGCACTTCGGGCA > SRR4302535.103071/1‑94 (MQ=60)
GGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAG > SRR4302535.4040701/1‑94 (MQ=60)
GGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAG < SRR4302535.2105809/94‑1 (MQ=60)
GGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAG < SRR4302535.1997749/94‑1 (MQ=60)
GTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGG < SRR4302535.3868807/94‑1 (MQ=60)
GTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGG > SRR4302535.280352/1‑94 (MQ=60)
GTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGG > SRR4302535.64606/1‑94 (MQ=60)
CTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCCGGAT > SRR4302535.4154862/1‑94 (MQ=60)
CTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGAT < SRR4302535.377806/94‑1 (MQ=60)
TGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGCGCGCACGCACTTCGGGCAGGATG > SRR4302535.277738/1‑94 (MQ=60)
GTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGTACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCG < SRR4302535.516061/94‑1 (MQ=60)
GTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCG < SRR4302535.1254060/94‑1 (MQ=60)
TCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCTGGCAGGATGGGTTT > SRR4302535.2921523/1‑94 (MQ=60)
TCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTT < SRR4302535.2515062/94‑1 (MQ=60)
AGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACTGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTG < SRR4302535.1254452/94‑1 (MQ=60)
GCGTCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCAT < SRR4302535.2265302/94‑1 (MQ=60)
GCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCAT < SRR4302535.4140980/94‑1 (MQ=60)
GCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCAT < SRR4302535.35074/94‑1 (MQ=60)
CGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATC < SRR4302535.4548960/94‑1 (MQ=60)
CGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATC < SRR4302535.3613393/94‑1 (MQ=60)
GCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGGCACGGTTTCAGGTGCGCACGCAATTCGGGCAGGATGCGTTTTTCATCGT > SRR4302535.3678856/1‑94 (MQ=60)
CAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTT < SRR4302535.1394571/94‑1 (MQ=60)
CAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTT < SRR4302535.3591890/94‑1 (MQ=60)
AATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTA > SRR4302535.3933771/1‑94 (MQ=60)
AATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTA > SRR4302535.2320232/1‑94 (MQ=60)
AATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTA < SRR4302535.3406521/94‑1 (MQ=60)
AATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTA > SRR4302535.2896066/1‑94 (MQ=60)
AATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTA > SRR4302535.2145765/1‑94 (MQ=60)
AATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGGTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTA > SRR4302535.2585533/1‑94 (MQ=60)
ATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAT > SRR4302535.2849365/1‑94 (MQ=60)
ATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTAT < SRR4302535.54611/94‑1 (MQ=60)
TGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATC < SRR4302535.3624885/94‑1 (MQ=60)
GGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCG < SRR4302535.149108/94‑1 (MQ=60)
GGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCG < SRR4302535.2737858/94‑1 (MQ=60)
CTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTC > SRR4302535.347948/1‑94 (MQ=60)
CTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTC < SRR4302535.727146/94‑1 (MQ=60)
CTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTC < SRR4302535.4326211/94‑1 (MQ=60)
TTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCG > SRR4302535.698484/1‑94 (MQ=60)
TTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCG < SRR4302535.1371038/94‑1 (MQ=60)
TCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGG > SRR4302535.3048832/1‑94 (MQ=60)
CCAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGC > SRR4302535.937211/1‑94 (MQ=60)
CAGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCA > SRR4302535.3132901/1‑94 (MQ=60)
AGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAA > SRR4302535.1257551/1‑94 (MQ=60)
AGGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAA > SRR4302535.4248706/1‑94 (MQ=60)
GGCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAAT < SRR4302535.1779763/94‑1 (MQ=60)
GCTCGGCTGCGCGCGCGTTCCGACGGACCTCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATA < SRR4302535.405366/94‑1 (MQ=60)
GCTCGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATA < SRR4302535.2665383/94‑1 (MQ=60)
CGGCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCG < SRR4302535.2724876/94‑1 (MQ=60)
GCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGAT < SRR4302535.3811928/94‑1 (MQ=60)
GCTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGAT < SRR4302535.4609354/94‑1 (MQ=60)
CTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATC > SRR4302535.882127/1‑94 (MQ=60)
CTGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATC > SRR4302535.3124247/1‑94 (MQ=60)
TGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCG > SRR4302535.3783176/1‑94 (MQ=60)
TGCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCG > SRR4302535.736225/1‑94 (MQ=60)
GCGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGG > SRR4302535.4533313/1‑94 (MQ=60)
CGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGG < SRR4302535.3219979/94‑1 (MQ=60)
CGCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGG < SRR4302535.1699211/94‑1 (MQ=60)
GCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGA < SRR4302535.1386095/94‑1 (MQ=60)
GCGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGA > SRR4302535.277912/1‑94 (MQ=60)
CGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGAT > SRR4302535.2405595/1‑94 (MQ=60)
CGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGAT < SRR4302535.73450/94‑1 (MQ=60)
CGCGCGTTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTCATCGTCGGCAATACCGATCGGGAT > SRR4302535.611471/1‑94 (MQ=60)
TTCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTC < SRR4302535.1037051/94‑1 (MQ=60)
TCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCC < SRR4302535.4210852/94‑1 (MQ=60)
TCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCC < SRR4302535.629355/94‑1 (MQ=60)
TCCGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCC < SRR4302535.1995570/94‑1 (MQ=60)
CGACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCAC < SRR4302535.18542/94‑1 (MQ=60)
GACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACG < SRR4302535.185411/94‑1 (MQ=60)
GACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACG < SRR4302535.558940/94‑1 (MQ=60)
GACGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACG > SRR4302535.2988296/1‑94 (MQ=60)
CGGACTGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGC > SRR4302535.499849/1‑94 (MQ=60)
CGGACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGC > SRR4302535.973504/1‑94 (MQ=60)
GACCGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCGG > SRR4302535.600522/1‑94 (MQ=60)
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ACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACTGCCACGGTTTCAGGTGCGCACGCACTTCGGGCAGGATGCGTTTTGCATCGTTATCGTCGGCAATACCGATCGGGATGACGTCCACGGCGG > NC_000913/4511539‑4511722
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
