Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,549,566 |
A→G |
D121G (GAC→GGC) |
uxuA → |
mannonate hydrolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,549,566 | 0 | A | G | 100.0%
| 673.1
/ NA
| 213 | D121G (GAC→GGC) | uxuA | mannonate hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (98/115); total (98/115) |
Only 100 of 221 total aligned reads displayed.
ACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACA > NC_000913/4549476‑4549655
|
aCCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCg < 2:2632532/93‑1 (MQ=255)
ccTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCgg > 2:493810/1‑93 (MQ=255)
cTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAggcggc > 2:1231655/1‑93 (MQ=255)
cTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAggcggc > 1:2683493/1‑93 (MQ=255)
ggCGCAGTGTGTCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTc < 2:3528823/93‑1 (MQ=255)
ggCGCAGTATGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTc > 2:4572424/1‑93 (MQ=255)
gcAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCaa > 1:3048486/1‑93 (MQ=255)
cAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCaaa < 1:1318164/93‑1 (MQ=255)
cAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCaaa < 2:2697604/93‑1 (MQ=255)
cAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCaaa < 2:3182302/93‑1 (MQ=255)
gtgtGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGc < 1:2935588/93‑1 (MQ=255)
tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGct > 2:2113206/1‑93 (MQ=255)
gtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctc > 2:2296047/1‑93 (MQ=255)
gtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctc > 1:3449569/1‑93 (MQ=255)
gtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctc < 2:4132053/93‑1 (MQ=255)
gtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctc < 1:569870/93‑1 (MQ=255)
tgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctct < 1:2368597/93‑1 (MQ=255)
tgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctct < 2:1769842/93‑1 (MQ=255)
tgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctct < 2:3080248/93‑1 (MQ=255)
ggCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTg < 1:1730065/93‑1 (MQ=255)
cATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTgcg > 1:4280921/1‑93 (MQ=255)
aTTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTgcgc > 2:3652797/1‑93 (MQ=255)
ttCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCt > 1:2506429/1‑93 (MQ=255)
ttCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCt > 1:446328/1‑93 (MQ=255)
ttCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCt > 2:3847307/1‑93 (MQ=255)
cGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGCACTGACCTCGAATACGTGCTGTCAGGCGGCTCCAAAGCTCTGCGCTTc > 1:3023739/1‑93 (MQ=255)
cACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGa > 1:3193894/1‑93 (MQ=255)
ccGGGTGCTACAACTTCATGTCGGTGCTCGACTGGACCCGTAATGACCTCGAATACATGCTGCCAGGATGCCCCAGAGGTCTGTGCGTCGAcc > 2:818869/1‑93 (MQ=255)
cGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCa < 1:461133/93‑1 (MQ=255)
cGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCa < 1:3241658/93‑1 (MQ=255)
cGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCa < 1:3894592/93‑1 (MQ=255)
gtgtGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAg > 1:62241/1‑93 (MQ=255)
gtgCTACCACTTCATGCCGGTGCTAGACTGGACCCGTACTGACCTCGACTCCGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAgtt < 2:3736685/93‑3 (MQ=255)
gtgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGAt < 2:3122379/93‑1 (MQ=255)
gtgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGAt < 2:2184423/93‑1 (MQ=255)
gCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCg < 1:1113003/93‑1 (MQ=255)
gCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCg < 1:4244542/93‑1 (MQ=255)
cTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGa > 2:2998990/1‑93 (MQ=255)
tACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGaa < 1:3736446/93‑1 (MQ=255)
tACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGaa < 2:61596/93‑1 (MQ=255)
tACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGaa < 1:2308495/93‑1 (MQ=255)
aCAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAt < 2:708439/93‑1 (MQ=255)
cAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAtt < 2:2795322/93‑1 (MQ=255)
cAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAtt > 1:4138120/1‑93 (MQ=255)
aaCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTc > 2:4635587/1‑93 (MQ=255)
aaCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTc > 2:194275/1‑93 (MQ=255)
aaCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTc > 1:3254988/1‑93 (MQ=255)
aaCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTc > 2:524731/1‑93 (MQ=255)
aCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCg > 1:2053511/1‑93 (MQ=255)
aCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCg > 1:1862068/1‑93 (MQ=255)
ttCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCt < 1:37514/93‑1 (MQ=255)
tCATGCCGGTGCTCGACTGGACCCGTACTGCCCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTg < 2:4365782/93‑1 (MQ=255)
cATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGc < 1:1560031/93‑1 (MQ=255)
aTGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCa < 1:1920986/93‑1 (MQ=255)
aTGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCa > 1:208744/1‑93 (MQ=255)
aTGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCa > 2:4000525/1‑93 (MQ=255)
gCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAtt < 2:4651869/93‑1 (MQ=255)
cGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCATGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCg > 2:2554324/1‑93 (MQ=255)
cGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCg > 1:2366191/1‑93 (MQ=255)
gCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAt < 2:2494975/93‑1 (MQ=255)
gCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAt < 1:150487/93‑1 (MQ=255)
gCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAt < 1:2800617/93‑1 (MQ=255)
tCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGc > 1:19588/1‑93 (MQ=255)
cGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCa > 2:1148405/1‑93 (MQ=255)
gACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCat < 2:4242426/93‑1 (MQ=255)
gACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCat < 2:2165889/93‑1 (MQ=255)
aCTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCata < 2:1434381/93‑1 (MQ=255)
tGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATc < 1:1660915/93‑1 (MQ=255)
gACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCt > 2:893316/1‑93 (MQ=255)
gACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCt < 2:3365093/93‑1 (MQ=255)
ccGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaa < 2:1362589/93‑1 (MQ=255)
ccGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaa > 2:3944122/1‑93 (MQ=255)
ccGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaa > 1:66562/1‑93 (MQ=255)
cGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaaa < 1:2483529/93‑1 (MQ=255)
gTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAc < 2:4495803/93‑1 (MQ=255)
gTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAc > 1:2197354/1‑93 (MQ=255)
cTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGcc < 1:2648020/93‑1 (MQ=255)
cTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGcc > 1:875500/1‑93 (MQ=255)
tGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGccc > 2:3566370/1‑93 (MQ=255)
tGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGccc > 2:2904634/1‑93 (MQ=255)
aCCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAg > 2:1217801/1‑93 (MQ=255)
ccTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAgg > 1:1571054/1‑93 (MQ=255)
cTCGAATACGTGCTGCCAGGGGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAggg > 2:1508573/1‑92 (MQ=255)
cTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgc < 2:3271072/93‑1 (MQ=255)
cTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgc < 2:498787/93‑1 (MQ=255)
cTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgc > 1:3051506/1‑93 (MQ=255)
tCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgcg > 1:4335864/1‑93 (MQ=255)
cGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgcgc < 1:1036916/93‑1 (MQ=255)
cGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgcgc > 1:1198408/1‑93 (MQ=255)
cGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgcgc < 2:1478085/93‑1 (MQ=255)
aaTACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCgg > 1:790074/1‑93 (MQ=255)
tACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGaa < 1:2387252/93‑1 (MQ=255)
cGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGc < 1:3830224/93‑1 (MQ=255)
tgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGCTCGAATTCGCTGCATTCGCAATGCCTATCCTGACACGCCCAGCCGCGGACGCGGAtt > 2:2152590/1‑93 (MQ=255)
tgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAtt > 1:1356586/1‑93 (MQ=255)
tgcCAGCCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAtt < 2:1573633/93‑1 (MQ=255)
ccAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTac > 2:1695563/1‑93 (MQ=255)
cAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTaca > 1:3321681/1‑93 (MQ=255)
cAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTaca > 1:3696070/1‑93 (MQ=255)
cAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAACGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTaca > 2:4081262/1‑93 (MQ=255)
|
ACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACA > NC_000913/4549476‑4549655
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCG > NC_000913/4549476‑4549658
|
ACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGG > SRR4302535.1088634/1‑94 (MQ=60)
CCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGC > SRR4302535.2702684/1‑94 (MQ=60)
CTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCT > SRR4302535.4016365/1‑94 (MQ=60)
CGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAA > SRR4302535.3069840/1‑94 (MQ=60)
CAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAG < SRR4302535.4417321/94‑1 (MQ=60)
CAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAG < SRR4302535.1327580/94‑1 (MQ=60)
CAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAG < SRR4302535.3056535/94‑1 (MQ=60)
AGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGC < SRR4302535.3643467/94‑1 (MQ=60)
GTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCT < SRR4302535.2956247/94‑1 (MQ=60)
GTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCT < SRR4302535.2512923/94‑1 (MQ=60)
TGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTC < SRR4302535.3903646/94‑1 (MQ=60)
TGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTC > SRR4302535.3509431/1‑94 (MQ=60)
TGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTC > SRR4302535.3473551/1‑94 (MQ=60)
GTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCT > SRR4302535.2402693/1‑94 (MQ=60)
GTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCT < SRR4302535.573872/94‑1 (MQ=60)
TGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTG < SRR4302535.3006121/94‑1 (MQ=60)
TGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTG < SRR4302535.2385602/94‑1 (MQ=60)
GGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGC < SRR4302535.1742571/94‑1 (MQ=60)
GCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCG > SRR4302535.4310213/1‑94 (MQ=60)
ATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCT > SRR4302535.449450/1‑94 (MQ=60)
ATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCT > SRR4302535.2524498/1‑94 (MQ=60)
ATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCT > SRR4302535.2238871/1‑94 (MQ=60)
ATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCT > SRR4302535.4271666/1‑94 (MQ=60)
TCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGCACTGACCTCGAATACGTGCTGTCAGGCGGCTCCAAAGCTCTGCGCTTC > SRR4302535.3044910/1‑94 (MQ=60)
CGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCG < SRR4302535.245855/94‑1 (MQ=60)
CGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCG > SRR4302535.207679/1‑94 (MQ=60)
GCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGA > SRR4302535.3215992/1‑94 (MQ=60)
CACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGAC < SRR4302535.4305892/94‑1 (MQ=60)
CGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAG < SRR4302535.3921288/94‑1 (MQ=60)
CGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAG > SRR4302535.62705/1‑94 (MQ=60)
CGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAG < SRR4302535.464355/94‑1 (MQ=60)
CGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAG > SRR4302535.3159869/1‑94 (MQ=60)
CGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAG < SRR4302535.3264173/94‑1 (MQ=60)
TGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGAT < SRR4302535.1772978/94‑1 (MQ=60)
TGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCG < SRR4302535.2675550/94‑1 (MQ=60)
GCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGA < SRR4302535.1120941/94‑1 (MQ=60)
GCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGA < SRR4302535.4273595/94‑1 (MQ=60)
GCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGA < SRR4302535.173151/94‑1 (MQ=60)
TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT < SRR4302535.3762307/94‑1 (MQ=60)
TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT < SRR4302535.2325017/94‑1 (MQ=60)
ACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATT > SRR4302535.4166458/1‑94 (MQ=60)
CAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTC > SRR4302535.3277603/1‑94 (MQ=60)
AACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCG > SRR4302535.3731043/1‑94 (MQ=60)
AACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCG > SRR4302535.77624/1‑94 (MQ=60)
AACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCG > SRR4302535.1875497/1‑94 (MQ=60)
AACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCG > SRR4302535.2068301/1‑94 (MQ=60)
CTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCT < SRR4302535.2207884/94‑1 (MQ=60)
CTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCT > SRR4302535.3925503/1‑94 (MQ=60)
CTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCT < SRR4302535.1906550/94‑1 (MQ=60)
TTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTG < SRR4302535.2384786/94‑1 (MQ=60)
TTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTG < SRR4302535.37803/94‑1 (MQ=60)
TTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTG < SRR4302535.2922608/94‑1 (MQ=60)
CATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCA > SRR4302535.210178/1‑94 (MQ=60)
CATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCA < SRR4302535.1571273/94‑1 (MQ=60)
ATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAT < SRR4302535.1001701/94‑1 (MQ=60)
ATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAT < SRR4302535.1934832/94‑1 (MQ=60)
ATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAT > SRR4302535.2785783/1‑94 (MQ=60)
CCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCG > SRR4302535.2383177/1‑94 (MQ=60)
GGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAA > SRR4302535.1806605/1‑94 (MQ=60)
GTGCTCGACTGGACCCCTAGTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAA < SRR4302535.1545771/94‑1 (MQ=60)
TGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAT < SRR4302535.2350935/94‑1 (MQ=60)
TGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAT < SRR4302535.616021/94‑1 (MQ=60)
TGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAT < SRR4302535.869714/94‑1 (MQ=60)
TGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAT < SRR4302535.2812103/94‑1 (MQ=60)
GCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATG < SRR4302535.2820539/94‑1 (MQ=60)
GCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATG < SRR4302535.151539/94‑1 (MQ=60)
GCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATG > SRR4302535.1474405/1‑94 (MQ=60)
GCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATG < SRR4302535.4585525/94‑1 (MQ=60)
CTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGC > SRR4302535.1573113/1‑94 (MQ=60)
CTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGC > SRR4302535.19735/1‑94 (MQ=60)
TCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCA < SRR4302535.2045859/94‑1 (MQ=60)
CGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCAT < SRR4302535.3256843/94‑1 (MQ=60)
CGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCAT < SRR4302535.1399516/94‑1 (MQ=60)
GACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATA < SRR4302535.632198/94‑1 (MQ=60)
ACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATAT > SRR4302535.1223529/1‑94 (MQ=60)
ACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATAT < SRR4302535.795175/94‑1 (MQ=60)
CTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATC < SRR4302535.2154677/94‑1 (MQ=60)
CTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATC < SRR4302535.2466829/94‑1 (MQ=60)
TGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCC < SRR4302535.1672916/94‑1 (MQ=60)
TGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCC < SRR4302535.3203806/94‑1 (MQ=60)
GACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCCCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTG < SRR4302535.2525463/94‑1 (MQ=60)
CCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAA > SRR4302535.67061/1‑94 (MQ=60)
CGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAC < SRR4302535.2501435/94‑1 (MQ=60)
CGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAC > SRR4302535.2213015/1‑94 (MQ=60)
GTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACG < SRR4302535.1120976/94‑1 (MQ=60)
GTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACG > SRR4302535.3275003/1‑94 (MQ=60)
CTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACG < SRR4302535.500848/94‑1 (MQ=60)
ACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCC > SRR4302535.881703/1‑94 (MQ=60)
ACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCC < SRR4302535.1943006/94‑1 (MQ=60)
CTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCC < SRR4302535.2666988/94‑1 (MQ=60)
CTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATAGAATTCGCTGCATTCGAAATGCAAATCCTGAAACGGCC > SRR4302535.162429/1‑94 (MQ=60)
TGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCA < SRR4302535.436279/94‑1 (MQ=60)
ACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGG > SRR4302535.1582396/1‑94 (MQ=60)
CCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGC > SRR4302535.3072882/1‑94 (MQ=60)
CTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCG > SRR4302535.338037/1‑94 (MQ=60)
CTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCG > SRR4302535.4365519/1‑94 (MQ=60)
TCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGC > SRR4302535.1206993/1‑94 (MQ=60)
CGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCG < SRR4302535.1044282/94‑1 (MQ=60)
GAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGG > SRR4302535.3809928/1‑94 (MQ=60)
GAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGG > SRR4302535.795617/1‑94 (MQ=60)
GAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGG > SRR4302535.3316747/1‑94 (MQ=60)
TACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAG < SRR4302535.2404415/94‑1 (MQ=60)
CGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCG < SRR4302535.3776765/94‑1 (MQ=60)
CGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCG < SRR4302535.3856641/94‑1 (MQ=60)
GCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAT < SRR4302535.1337286/94‑1 (MQ=60)
CTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATT > SRR4302535.1366293/1‑94 (MQ=60)
TGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTA > SRR4302535.161674/1‑94 (MQ=60)
CCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACA < SRR4302535.4444632/94‑1 (MQ=60)
CCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACA > SRR4302535.3071472/1‑94 (MQ=60)
CCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACA > SRR4302535.3344791/1‑94 (MQ=60)
CCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACA > SRR4302535.3721650/1‑94 (MQ=60)
CAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACAC > SRR4302535.1496954/1‑94 (MQ=60)
CAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACAC > SRR4302535.1203179/1‑94 (MQ=60)
AGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACC < SRR4302535.2832012/94‑1 (MQ=60)
GGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCG < SRR4302535.3479046/94‑1 (MQ=60)
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ACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCG > NC_000913/4549476‑4549658
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
