Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,632,032 |
A→G |
L283P (CTG→CCG) |
rob ← |
right origin‑binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,632,032 | 0 | A | G | 100.0%
| 542.8
/ NA
| 174 | L283P (CTG→CCG) | rob | right origin‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (92/82); total (92/82) |
Only 100 of 188 total aligned reads displayed.
TGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGTC > NC_000913/4631945‑4632121
|
tggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTca > 1:4105756/1‑93 (MQ=255)
ggTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTcaca < 2:2149928/93‑1 (MQ=255)
ggTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTcaca > 2:455619/1‑93 (MQ=255)
gTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAg < 1:3456149/93‑1 (MQ=255)
gTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAg < 2:3569954/93‑1 (MQ=255)
gTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAg > 2:3176985/1‑93 (MQ=255)
tCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGc > 2:510379/1‑93 (MQ=255)
ttGAAACCGCAGGGGACATCTCGCATCTGGACTCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTa > 1:2356687/1‑93 (MQ=255)
aaaCCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGAt < 2:944176/93‑1 (MQ=255)
ccGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAACCAGCGGTTCACAGCGTAGATTaa < 2:751439/93‑1 (MQ=255)
cGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAAt < 1:958784/93‑1 (MQ=255)
cGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAAt < 2:304464/93‑1 (MQ=255)
cGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAAt < 2:2261511/93‑1 (MQ=255)
cGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAAt > 1:2183990/1‑93 (MQ=255)
cGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAAt > 2:2788428/1‑93 (MQ=255)
gCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAAtt > 1:2392759/1‑93 (MQ=255)
gCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAAtt < 2:2728881/93‑1 (MQ=255)
gCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAAtt > 2:2653486/1‑93 (MQ=255)
cAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTg < 2:3892842/93‑1 (MQ=255)
cAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTg < 1:1462927/93‑1 (MQ=255)
aGGGGACATCTCGCATCTGGTCGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTgg < 2:2905307/93‑1 (MQ=255)
ggggACATCTCGCATCTGGACGCCCCTGCATTAGATGTGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTggg > 1:4635353/1‑93 (MQ=255)
ggggACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTggg < 2:2858118/93‑1 (MQ=255)
gACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGa < 2:791395/93‑1 (MQ=255)
gACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGa < 1:3583034/93‑1 (MQ=255)
aCATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGAt > 1:1343568/1‑93 (MQ=255)
cATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGAtc < 2:4329028/93‑1 (MQ=255)
aTCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGAtct > 1:3625515/1‑93 (MQ=255)
tctcGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGAtctc > 2:3651091/1‑93 (MQ=255)
tctcGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGAtctc > 1:3205863/1‑93 (MQ=255)
ctcGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTcc < 2:3306169/93‑1 (MQ=255)
ctcGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTcc > 2:1870583/1‑93 (MQ=255)
gCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGc > 1:326895/1‑93 (MQ=255)
gCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGc > 1:2876111/1‑93 (MQ=255)
gCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGc > 2:3732645/1‑93 (MQ=255)
tCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCttt < 1:1143161/93‑1 (MQ=255)
ggACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGc > 1:505034/1‑93 (MQ=255)
gACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCa < 2:2699818/93‑1 (MQ=255)
gACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCa < 1:2711835/93‑1 (MQ=255)
aCGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAt < 2:810540/93‑1 (MQ=255)
cGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTTGGCGATCTCCCGCTTTGGCAtc > 1:1626849/1‑93 (MQ=255)
gCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtct > 1:4321169/1‑93 (MQ=255)
gCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtct > 1:2611107/1‑93 (MQ=255)
gCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtct > 2:20118/1‑93 (MQ=255)
ccccTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtctt > 1:1527800/1‑93 (MQ=255)
ccccTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtctt < 2:3940787/93‑1 (MQ=255)
cccTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttc < 1:490550/93‑1 (MQ=255)
cccTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttc < 2:12539/93‑1 (MQ=255)
cccTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttc < 1:3369730/93‑1 (MQ=255)
cccTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttc > 2:541992/1‑93 (MQ=255)
ccTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttct < 2:4120714/93‑1 (MQ=255)
ccTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttct < 2:1531073/93‑1 (MQ=255)
ccTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGAGTAATTGGGCGATCTCCCGCTTTGGCAtcttct < 2:1229900/93‑1 (MQ=255)
cTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTg > 2:2197479/1‑93 (MQ=255)
tGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGc > 2:1317212/1‑93 (MQ=255)
gCATTAGATGAGCTGCAGCGTTAACGGCCGGTCGGAATCAGCGGTGCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGcc < 1:2238368/93‑1 (MQ=255)
aTTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCgg < 1:827135/93‑1 (MQ=255)
aTTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCgg > 1:2333686/1‑93 (MQ=255)
aTTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCgg < 2:1171978/93‑1 (MQ=255)
aTTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCgg > 2:4158277/1‑93 (MQ=255)
ttAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg > 1:852923/1‑93 (MQ=255)
ttAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg > 2:4658281/1‑93 (MQ=255)
ttAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg < 1:3720123/93‑1 (MQ=255)
gATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtag > 1:1827839/1‑93 (MQ=255)
tGAGCTGCAGCGTTAACGACGGATCGTAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtagta < 2:3793231/93‑1 (MQ=255)
tGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGACCTCCCGCTTTGGCATCTTCTGCCGGgtagta > 1:109996/1‑93 (MQ=255)
tGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGGAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtagta > 1:3041940/1‑93 (MQ=255)
aGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATc < 2:1957160/93‑1 (MQ=255)
tGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCt < 2:2614508/93‑1 (MQ=255)
tGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCt > 1:974373/1‑93 (MQ=255)
gCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTc < 1:762753/93‑1 (MQ=255)
gCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTc < 1:1776957/93‑1 (MQ=255)
gCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAat > 2:324422/1‑93 (MQ=255)
gCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAat > 2:1483437/1‑93 (MQ=255)
gTTAACGCCGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAatat < 1:585137/93‑1 (MQ=255)
gTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAatat < 1:1107593/93‑1 (MQ=255)
gTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAatat < 2:2434584/93‑1 (MQ=255)
ttAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATc > 1:400309/1‑93 (MQ=255)
ttAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATc > 2:3497309/1‑93 (MQ=255)
ttAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTATGCCGGGTAGTATCGCTCAATATc > 2:1365112/1‑93 (MQ=255)
tAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATcc > 2:4249221/1‑93 (MQ=255)
aaCGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCt < 2:657876/93‑1 (MQ=255)
gacgGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCTTCTTCTGCCGGGCAGTATCGCTCAATATCCTGAc > 1:3161668/1‑93 (MQ=255)
gacgGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCATGAc > 1:2910624/1‑93 (MQ=255)
acgGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGAcc < 2:2243710/93‑1 (MQ=255)
acgGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGAcc > 2:1598992/1‑93 (MQ=255)
aTCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTa < 2:909506/93‑1 (MQ=255)
aTCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTa > 1:3046554/1‑93 (MQ=255)
ggAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTCCgg < 1:161310/93‑1 (MQ=255)
ggAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACgg < 2:4127163/93‑1 (MQ=255)
gAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGgc < 1:3433461/93‑1 (MQ=255)
gAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGgc > 2:148552/1‑93 (MQ=255)
gAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACCgc > 2:4581650/1‑93 (MQ=255)
aTCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGgcgc > 1:1793549/1‑93 (MQ=255)
tCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCGCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTGCGGcgcg > 1:4015553/1‑93 (MQ=255)
tCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGcgcg > 1:1973592/1‑93 (MQ=255)
cagcggTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGt > 2:4539528/1‑93 (MQ=255)
agcggTTCACAGCGTAGATTAATTGGGCGATCTCCTGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGTc < 2:2539192/93‑1 (MQ=255)
agcggTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGTc < 1:2083422/93‑1 (MQ=255)
agcggTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGTc < 2:211722/93‑1 (MQ=255)
|
TGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGTC > NC_000913/4631945‑4632121
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGTCAGGT > NC_000913/4631939‑4632125
|
TCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCG < SRR4302535.528634/94‑1 (MQ=60)
CTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGG < SRR4302535.1294545/94‑1 (MQ=60)
CTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCA > SRR4302535.4133868/1‑94 (MQ=60)
GGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAG < SRR4302535.3661387/94‑1 (MQ=60)
GTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGC > SRR4302535.3478111/1‑94 (MQ=60)
GTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGC < SRR4302535.3480171/94‑1 (MQ=60)
GTTGAAACCGCAGGGGACATCTCGCATCTGGACTCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTA > SRR4302535.2373588/1‑94 (MQ=60)
GTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTA < SRR4302535.1534607/94‑1 (MQ=60)
CCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAAT > SRR4302535.2199563/1‑94 (MQ=60)
CGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATT > SRR4302535.2409958/1‑94 (MQ=60)
CGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATT < SRR4302535.965593/94‑1 (MQ=60)
GCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTG < SRR4302535.2090945/94‑1 (MQ=60)
GCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTG < SRR4302535.496823/94‑1 (MQ=60)
CAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGG > SRR4302535.2227441/1‑94 (MQ=60)
CAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGG < SRR4302535.1473408/94‑1 (MQ=60)
AGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGTGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGG > SRR4302535.4666792/1‑94 (MQ=60)
GGAGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGC < SRR4302535.2168626/94‑1 (MQ=60)
GGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGA > SRR4302535.163005/1‑94 (MQ=60)
GGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGA > SRR4302535.3220492/1‑94 (MQ=60)
GACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGAT < SRR4302535.2908110/94‑1 (MQ=60)
GACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGAT < SRR4302535.3607886/94‑1 (MQ=60)
GACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGAT > SRR4302535.1353158/1‑94 (MQ=60)
ACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATC < SRR4302535.289346/94‑1 (MQ=60)
ACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATC > SRR4302535.584530/1‑94 (MQ=60)
CATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCT < SRR4302535.930059/94‑1 (MQ=60)
CATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCT < SRR4302535.3570141/94‑1 (MQ=60)
CATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCT > SRR4302535.3650643/1‑94 (MQ=60)
CATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCT < SRR4302535.1262653/94‑1 (MQ=60)
CATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCT > SRR4302535.3169031/1‑94 (MQ=60)
ATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTC > SRR4302535.3228064/1‑94 (MQ=60)
CTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCC > SRR4302535.2350963/1‑94 (MQ=60)
CTCGCATCTGGACGCACCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCC < SRR4302535.1548115/94‑1 (MQ=60)
CGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGC > SRR4302535.2896484/1‑94 (MQ=60)
CGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGC > SRR4302535.329161/1‑94 (MQ=60)
GCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCT < SRR4302535.1383017/94‑1 (MQ=60)
ATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTT > SRR4302535.731760/1‑94 (MQ=60)
TCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTG < SRR4302535.1151312/94‑1 (MQ=60)
TGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGC > SRR4302535.508563/1‑94 (MQ=60)
GACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAT < SRR4302535.2731215/94‑1 (MQ=60)
GACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAT > SRR4302535.2701895/1‑94 (MQ=60)
ACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTTGGCGATCTCCCGCTTTGGCATC > SRR4302535.1638593/1‑94 (MQ=60)
CGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCT > SRR4302535.4350728/1‑94 (MQ=60)
CGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCT > SRR4302535.2629840/1‑94 (MQ=60)
CGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCT > SRR4302535.1931291/1‑94 (MQ=60)
GCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTT > SRR4302535.1538806/1‑94 (MQ=60)
CCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCT < SRR4302535.493992/94‑1 (MQ=60)
CCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCT < SRR4302535.3393174/94‑1 (MQ=60)
GCATTAGATGAGCTGCAGCGTTAACGGCCGGTCGGAATCAGCGGTGCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCG < SRR4302535.2254292/94‑1 (MQ=60)
GCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCG < SRR4302535.1829456/94‑1 (MQ=60)
CATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGG > SRR4302535.2350384/1‑94 (MQ=60)
CATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGG < SRR4302535.1685188/94‑1 (MQ=60)
ATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGG > SRR4302535.4628613/1‑94 (MQ=60)
ATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGG < SRR4302535.832924/94‑1 (MQ=60)
ATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGG > SRR4302535.858929/1‑94 (MQ=60)
TTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGT < SRR4302535.3745897/94‑1 (MQ=60)
AGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAG > SRR4302535.1841037/1‑94 (MQ=60)
ATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGACCTCCCGCTTTGGCATCTTCTGCCGGGTAGTA > SRR4302535.110773/1‑94 (MQ=60)
ATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGGAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTA > SRR4302535.3063253/1‑94 (MQ=60)
GAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATC < SRR4302535.857979/94‑1 (MQ=60)
GAGCTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATC < SRR4302535.3370617/94‑1 (MQ=60)
CTGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCT > SRR4302535.981289/1‑94 (MQ=60)
TGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTC > SRR4302535.3616726/1‑94 (MQ=60)
TGCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTC > SRR4302535.2973561/1‑94 (MQ=60)
GCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCA < SRR4302535.1789824/94‑1 (MQ=60)
GCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCA < SRR4302535.3760828/94‑1 (MQ=60)
GCAGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCA < SRR4302535.768128/94‑1 (MQ=60)
AGCGTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAAT > SRR4302535.976616/1‑94 (MQ=60)
GTTAACGCCGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATC < SRR4302535.589239/94‑1 (MQ=60)
GTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATC < SRR4302535.1115504/94‑1 (MQ=60)
GTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATC > SRR4302535.2275324/1‑94 (MQ=60)
GTTAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATC > SRR4302535.403113/1‑94 (MQ=60)
TAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCT < SRR4302535.4116950/94‑1 (MQ=60)
TAACGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCT < SRR4302535.340680/94‑1 (MQ=60)
CGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCTTCTTCTGCCGGGCAGTATCGCTCAATATCCTGAC > SRR4302535.3183599/1‑94 (MQ=60)
CGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGAC > SRR4302535.479976/1‑94 (MQ=60)
CGACGGATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCATGAC > SRR4302535.2931184/1‑94 (MQ=60)
GATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTA > SRR4302535.3067897/1‑94 (MQ=60)
GATCGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTA > SRR4302535.3067707/1‑94 (MQ=60)
AACGGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTAC < SRR4302535.244447/94‑1 (MQ=60)
GGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTCCGGC < SRR4302535.162442/94‑1 (MQ=60)
GGAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGC > SRR4302535.1122604/1‑94 (MQ=60)
GAATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCG < SRR4302535.3457320/94‑1 (MQ=60)
AATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGC > SRR4302535.1806516/1‑94 (MQ=60)
ATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCGCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTGCGGCGCG > SRR4302535.4043019/1‑94 (MQ=60)
ATCAGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCG > SRR4302535.1987806/1‑94 (MQ=60)
AGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGTTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGTCA < SRR4302535.4299148/94‑1 (MQ=60)
AGCGGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGTCA < SRR4302535.2098427/94‑1 (MQ=60)
GGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGTCAGGT < SRR4302535.3896238/94‑1 (MQ=60)
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TCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTATCGCTCAATATCCTGACCTTTACGGCGCGTCAGGT > NC_000913/4631939‑4632125
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
