Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1873 183.1 9376148 98.2% 9207377 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑GCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACTG  >  NC_000913/4013083‑4013262
                                                                                             |                                                                                         
TCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG                                                                                           <  SRR4302535.2311644/94‑1 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG                                                                                           >  SRR4302535.2512139/1‑94 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG                                                                                           <  SRR4302535.2643790/94‑1 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG                                                                                           >  SRR4302535.2920520/1‑94 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG                                                                                           <  SRR4302535.3378739/94‑1 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG                                                                                           <  SRR4302535.4486822/94‑1 (MQ=60)
 CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGG                                                                                          >  SRR4302535.1754233/1‑94 (MQ=60)
 CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGG                                                                                          >  SRR4302535.3894786/1‑94 (MQ=60)
  TTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑GC                                                                                       >  SRR4302535.3315657/1‑94 (MQ=60)
   TTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑GCG                                                                                      <  SRR4302535.1437155/94‑1 (MQ=60)
        ATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTA                                                                                 >  SRR4302535.1354510/1‑94 (MQ=60)
        ATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTA                                                                                 >  SRR4302535.525876/1‑94 (MQ=60)
         TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAA                                                                                <  SRR4302535.2216021/94‑1 (MQ=60)
             CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATC                                                                            <  SRR4302535.1738460/94‑1 (MQ=60)
             CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATC                                                                            <  SRR4302535.2183559/94‑1 (MQ=60)
             CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATC                                                                            <  SRR4302535.2153547/94‑1 (MQ=60)
             CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATC                                                                            <  SRR4302535.1297700/94‑1 (MQ=60)
              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCG                                                                           <  SRR4302535.4278690/94‑1 (MQ=60)
              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCG                                                                           <  SRR4302535.2754353/94‑1 (MQ=60)
              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCG                                                                           >  SRR4302535.1106197/1‑94 (MQ=60)
               GCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGG                                                                          >  SRR4302535.3725295/1‑94 (MQ=60)
                CCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGATCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGT                                                                         >  SRR4302535.1607412/1‑94 (MQ=60)
                 CCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTT                                                                        <  SRR4302535.4496230/94‑1 (MQ=60)
                 CCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTT                                                                        <  SRR4302535.2356782/94‑1 (MQ=60)
                 CCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTT                                                                        >  SRR4302535.2298589/1‑94 (MQ=60)
                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTG                                                                       >  SRR4302535.1944967/1‑94 (MQ=60)
                   GCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGC                                                                      >  SRR4302535.3640292/1‑94 (MQ=60)
                   GCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGC                                                                      >  SRR4302535.3696029/1‑94 (MQ=60)
                    CAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGCGCG‑‑TTAAGATCGGTTGCG                                                                     >  SRR4302535.1971504/1‑94 (MQ=60)
                     AGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGA                                                                    >  SRR4302535.1419482/1‑94 (MQ=60)
                      GCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGAT                                                                   <  SRR4302535.922010/94‑1 (MQ=60)
                      GCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGAT                                                                   >  SRR4302535.7203/1‑94 (MQ=60)
                      GCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGAT                                                                   <  SRR4302535.4514376/94‑1 (MQ=60)
                       CGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATA                                                                  <  SRR4302535.2057249/94‑1 (MQ=60)
                         CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATC                                                                >  SRR4302535.3199818/1‑94 (MQ=60)
                         CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATC                                                                >  SRR4302535.3307059/1‑94 (MQ=60)
                         CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATC                                                                >  SRR4302535.180303/1‑94 (MQ=60)
                         CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATC                                                                >  SRR4302535.4219654/1‑94 (MQ=60)
                          CTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCA                                                               <  SRR4302535.227678/94‑1 (MQ=60)
                           TGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAA                                                              <  SRR4302535.454565/94‑1 (MQ=60)
                           TGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCACATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAA                                                              >  SRR4302535.2377736/1‑94 (MQ=60)
                              CGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAG                                                           >  SRR4302535.4279059/1‑94 (MQ=60)
                              CGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAG                                                           >  SRR4302535.4312567/1‑94 (MQ=60)
                                CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGT                                                         <  SRR4302535.1231415/94‑1 (MQ=60)
                                CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGT                                                         >  SRR4302535.4699042/1‑94 (MQ=60)
                                CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGT                                                         <  SRR4302535.3626228/94‑1 (MQ=60)
                                 ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTT                                                        >  SRR4302535.4409775/1‑94 (MQ=60)
                                 ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTT                                                        >  SRR4302535.1250585/1‑94 (MQ=60)
                                 ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTT                                                        >  SRR4302535.4512147/1‑94 (MQ=60)
                                  TGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCGTATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTG                                                       >  SRR4302535.2536160/1‑94 (MQ=60)
                                  TGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTG                                                       >  SRR4302535.669193/1‑94 (MQ=60)
                                    GTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTT                                                     <  SRR4302535.588930/94‑1 (MQ=60)
                                      TTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTC                                                   >  SRR4302535.1180568/1‑94 (MQ=60)
                                       TCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCG                                                  <  SRR4302535.4481318/94‑1 (MQ=60)
                                       TCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCG                                                  <  SRR4302535.4190673/94‑1 (MQ=60)
                                        CAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGG                                                 <  SRR4302535.3164172/94‑1 (MQ=60)
                                          ACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTG                                               <  SRR4302535.4215945/94‑1 (MQ=60)
                                          ACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTG                                               <  SRR4302535.4684716/94‑1 (MQ=60)
                                          ACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTG                                               >  SRR4302535.3613160/1‑94 (MQ=60)
                                           CGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGA                                              >  SRR4302535.3195403/1‑94 (MQ=60)
                                             CTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAT                                            >  SRR4302535.3910303/1‑94 (MQ=60)
                                              TCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATT                                           >  SRR4302535.4204716/1‑94 (MQ=60)
                                                TCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCA                                         <  SRR4302535.1667016/94‑1 (MQ=60)
                                                TCCTGCGGAATGCTGTGATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCA                                         <  SRR4302535.1111008/94‑1 (MQ=60)
                                                 CCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGTATTCAG                                        >  SRR4302535.2030562/1‑94 (MQ=60)
                                                 CCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAG                                        <  SRR4302535.194438/94‑1 (MQ=60)
                                                  CTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGC                                       >  SRR4302535.612824/1‑94 (MQ=60)
                                                   TGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG                                      <  SRR4302535.4266596/94‑1 (MQ=60)
                                                    GCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGA                                     <  SRR4302535.1208948/94‑1 (MQ=60)
                                                     CGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGAC                                    >  SRR4302535.3740749/1‑94 (MQ=60)
                                                       GAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑GCGCATTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTT                                  >  SRR4302535.3328055/1‑94 (MQ=60)
                                                         ATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGT                                >  SRR4302535.2216686/1‑94 (MQ=60)
                                                          TGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTC                               <  SRR4302535.3555948/94‑1 (MQ=60)
                                                           GCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCC                              >  SRR4302535.3220735/1‑94 (MQ=60)
                                                            CTGTTATCCTGACCACCATATAAGCTGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGC                             >  SRR4302535.3609782/1‑94 (MQ=60)
                                                            CTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGC                             >  SRR4302535.445035/1‑94 (MQ=60)
                                                              GTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCC                           >  SRR4302535.3868049/1‑94 (MQ=60)
                                                              GTTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCC                           >  SRR4302535.1142679/1‑94 (MQ=60)
                                                               TTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCG                          <  SRR4302535.3005979/94‑1 (MQ=60)
                                                               TTATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCG                          <  SRR4302535.1576499/94‑1 (MQ=60)
                                                                 ATCCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC                        >  SRR4302535.2305703/1‑94 (MQ=60)
                                                                 ATCCTGACCACCATATAAGACGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC                        >  SRR4302535.4657571/1‑94 (MQ=60)
                                                                   CCTGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAG                      <  SRR4302535.1013822/94‑1 (MQ=60)
                                                                     TGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTT                    <  SRR4302535.684152/94‑1 (MQ=60)
                                                                     TGACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTT                    >  SRR4302535.1379947/1‑94 (MQ=60)
                                                                       ACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG                  <  SRR4302535.4293602/94‑1 (MQ=60)
                                                                       ACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG                  >  SRR4302535.811166/1‑94 (MQ=60)
                                                                       ACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG                  >  SRR4302535.802623/1‑94 (MQ=60)
                                                                       ACCACCATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG                  >  SRR4302535.2348758/1‑94 (MQ=60)
                                                                          AACATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCG               >  SRR4302535.4337494/1‑94 (MQ=60)
                                                                             ATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC            >  SRR4302535.2998621/1‑94 (MQ=60)
                                                                             ATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC            <  SRR4302535.3754672/94‑1 (MQ=60)
                                                                             ATATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC            >  SRR4302535.1044183/1‑94 (MQ=60)
                                                                               ATAAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCA          >  SRR4302535.156411/1‑94 (MQ=60)
                                                                                 AAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACG        <  SRR4302535.4292856/94‑1 (MQ=60)
                                                                                 AAGCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGGTGTTTCGGTGACTTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACG        >  SRR4302535.3043757/1‑94 (MQ=60)
                                                                                   GCCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCC      >  SRR4302535.177189/1‑94 (MQ=60)
                                                                                    CCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCA     >  SRR4302535.1002709/1‑94 (MQ=60)
                                                                                    CCGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCA     >  SRR4302535.1700749/1‑94 (MQ=60)
                                                                                     CGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC    >  SRR4302535.96312/1‑94 (MQ=60)
                                                                                     CGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC    <  SRR4302535.3866792/94‑1 (MQ=60)
                                                                                     CGAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGGTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC    >  SRR4302535.2460298/1‑94 (MQ=60)
                                                                                      GAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT   <  SRR4302535.2473487/94‑1 (MQ=60)
                                                                                      GAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT   >  SRR4302535.926705/1‑94 (MQ=60)
                                                                                      GAGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT   >  SRR4302535.3005325/1‑94 (MQ=60)
                                                                                       AGAATCGGCGCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACTG  <  SRR4302535.4271537/94‑1 (MQ=60)
                                                                                             |                                                                                         
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑GCG‑‑TTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACTG  >  NC_000913/4013083‑4013262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑