Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
780,918 |
T→C |
intergenic (+43/‑390) |
lysQ → / → nadA |
tRNA‑Lys/quinolinate synthetase A protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 780,918 | 0 | T | C | 99.7%
| 749.5
/ ‑5.9
| 303 | intergenic (+43/‑390) | lysQ/nadA | tRNA‑Lys/quinolinate synthetase A protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (177/125); total (177/126) |
| Fisher's exact test for biased strand distribution p-value = 4.16e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
Only 100 of 313 total aligned reads displayed.
TGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGC > NC_000913/780828‑780999
|
tGATTTTTAATCAATGGTTCGCAGGTCCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGacac < 1:3720542/93‑1 (MQ=11)
aCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTc < 1:9059305/93‑1 (MQ=21)
aCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTc > 1:132855/1‑93 (MQ=18)
aCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTc < 1:6197052/93‑1 (MQ=18)
tttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCaaa < 2:9598530/93‑1 (MQ=21)
tttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCaaa < 1:7666655/93‑1 (MQ=21)
tttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCaaa > 2:6552132/1‑93 (MQ=18)
ttaaaTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCaaa < 2:360151/90‑1 (MQ=255)
tAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGa > 1:1507085/1‑93 (MQ=18)
aTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGAtt < 1:331651/93‑1 (MQ=21)
cAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCg > 1:9950126/1‑93 (MQ=18)
aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGa > 2:6098484/1‑93 (MQ=18)
aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGa > 1:9177038/1‑93 (MQ=18)
aTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGac > 2:1937203/1‑92 (MQ=18)
aTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGaa > 2:4623360/1‑93 (MQ=18)
ttGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAAc < 1:6274197/93‑1 (MQ=18)
tGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAAcc < 1:7027451/93‑1 (MQ=18)
tGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAAcc < 2:4969545/93‑1 (MQ=21)
tGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAAcc < 2:8413080/93‑1 (MQ=21)
ggTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCt < 1:3126321/93‑1 (MQ=21)
gcGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTgc < 1:4773227/92‑1 (MQ=21)
cGCAGTTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTgca < 1:1842734/93‑1 (MQ=16)
gCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGACCCTgcag < 1:4957152/93‑1 (MQ=16)
cAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTgcagc < 1:2027820/93‑1 (MQ=21)
cAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTgcagc < 1:2378692/93‑1 (MQ=21)
ggTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGcagcag > 2:3499782/1‑93 (MQ=18)
gTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAgg > 2:4915456/1‑93 (MQ=18)
gTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAgg > 1:8396799/1‑93 (MQ=18)
ttCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCCGGt > 2:8884915/1‑93 (MQ=16)
ttCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGt > 1:527388/1‑93 (MQ=18)
tCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGtt < 2:8510940/93‑1 (MQ=18)
tCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGtt < 1:611312/93‑1 (MQ=18)
cGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGttt > 1:6692460/1‑93 (MQ=18)
gAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttg < 2:2946902/93‑1 (MQ=21)
aaTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttga < 1:7348349/93‑1 (MQ=21)
aaTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttga < 1:4051716/93‑1 (MQ=18)
aaTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttga > 1:4370776/1‑93 (MQ=18)
aaTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTCCAGCAGGTttga > 2:7738741/1‑93 (MQ=16)
tCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttgagt < 1:914533/93‑1 (MQ=21)
ccTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttgagtt < 2:8665222/93‑1 (MQ=18)
gCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttgagttgag < 1:5508167/93‑1 (MQ=21)
gCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttgagttgag > 2:4853028/1‑93 (MQ=18)
cACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgc > 2:1426317/1‑93 (MQ=18)
aCGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgcg < 1:2722253/93‑1 (MQ=18)
cGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgcgc > 1:6450169/1‑93 (MQ=18)
gACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCa > 2:9368450/1‑93 (MQ=18)
gACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCa < 2:596833/93‑1 (MQ=18)
cccACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGc > 1:8011432/1‑93 (MQ=18)
ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCg > 1:9564285/1‑93 (MQ=18)
ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCg > 1:5916301/1‑93 (MQ=18)
caccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGa > 2:8604845/1‑93 (MQ=18)
caccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGGTTGAGTTGAGCGCAGCGa > 1:4012476/1‑93 (MQ=16)
caccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGGTTGAGTTGAGCGCAGCGa > 2:2755921/1‑93 (MQ=16)
ccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGaaa > 1:8752183/1‑93 (MQ=21)
ccaATGTAAAAAAGCGCCCTAAAGCCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGaaa < 2:5512211/93‑1 (MQ=16)
aTGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacaa < 2:9805440/93‑1 (MQ=18)
tGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacaac > 2:2259360/1‑93 (MQ=18)
tGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacaac > 1:10028703/1‑93 (MQ=18)
tGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacaac > 2:5780876/1‑93 (MQ=21)
gTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACg > 2:9274439/1‑93 (MQ=21)
gTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACg < 2:9513210/93‑1 (MQ=18)
tAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACgg < 2:8046728/93‑1 (MQ=18)
tAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACgg > 2:10020888/1‑93 (MQ=21)
aaaaaaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGa > 1:1023332/1‑93 (MQ=18)
aaaaaaGCGCCCTAAAGGCGCGTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGa < 1:7815235/93‑1 (MQ=16)
aaaaaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAg < 2:9135199/93‑1 (MQ=18)
aaaaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGc < 2:1652760/93‑1 (MQ=18)
aaaGCGCCCTAAAGTCTCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCATCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGcc < 1:862129/93‑1 (MQ=11)
aaaGCGCCATAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGcc < 2:3761899/93‑1 (MQ=16)
aaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCg > 1:8086726/1‑93 (MQ=21)
aGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGc < 1:9296311/93‑1 (MQ=18)
ctcccTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCCGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTc < 2:3648106/91‑1 (MQ=255)
cccTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgc < 1:5134430/93‑1 (MQ=18)
ccTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgcg > 2:428919/1‑93 (MQ=18)
cTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAAAAACGGAGCCGCTCgcgg > 2:4055619/1‑93 (MQ=255)
cTAAAGGCGCTTTTTTGCTATCTACGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcgg > 2:1117119/1‑93 (MQ=16)
tAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCCGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggc > 1:9718366/1‑93 (MQ=16)
tAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggc < 1:4639017/93‑1 (MQ=18)
tAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggc > 2:2404606/1‑93 (MQ=18)
tAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggc > 1:9269687/1‑93 (MQ=21)
tAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggc > 2:412559/1‑93 (MQ=21)
aaaGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggcg > 1:2538895/1‑93 (MQ=21)
aaaGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggcg > 1:2942074/1‑93 (MQ=18)
aaaGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggcg > 2:2189580/1‑93 (MQ=18)
aaaGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCACCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCccggcc > 2:7227549/1‑92 (MQ=11)
aaGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGa > 2:7007434/1‑93 (MQ=18)
aaGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGa > 2:3868328/1‑93 (MQ=18)
aGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGAc > 2:6190196/1‑93 (MQ=21)
aGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGAc > 1:7176863/1‑93 (MQ=18)
gcTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGcc < 1:9859673/93‑1 (MQ=18)
cTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGAAGAccc > 2:6482514/1‑93 (MQ=255)
cTTTGTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGccc < 2:4736480/93‑1 (MQ=16)
tttttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGa > 1:5166216/1‑93 (MQ=21)
tttttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGa > 2:6752024/1‑93 (MQ=18)
ttttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGaa < 2:2361498/93‑1 (MQ=18)
tgttGCTATCTGCGACACTCAAAGATTCGAATCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGaa < 1:5711716/91‑1 (MQ=255)
tttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAg > 2:7477403/1‑93 (MQ=18)
tttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAg > 2:5277231/1‑93 (MQ=18)
tGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAggg < 1:4264956/93‑1 (MQ=17)
gCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGCTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgc > 1:4996890/1‑93 (MQ=9)
|
TGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGC > NC_000913/780828‑780999
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
