Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,961,605 G→A R80R (CGC→CGT gppA ← guanosine pentaphosphatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,961,6050GA99.6% 1878.3 / ‑5.1 517R80R (CGC→CGTgppAguanosine pentaphosphatase
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base A (272/243);  total (274/243)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.82e-01

Only 100 of 540 total aligned reads displayed.

CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGC  >  NC_000913/3961515‑3961694
                                                                                          |                                                                                         
 aCCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGa                                                                                        >  1:2884185/1‑93 (MQ=255)
  ccTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGaa                                                                                       <  2:6430807/93‑1 (MQ=255)
    tGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAAtt                                                                                     <  1:7247668/93‑1 (MQ=255)
      tACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTg                                                                                   >  2:3876669/1‑93 (MQ=255)
        ccGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCg                                                                                 <  1:3708672/93‑1 (MQ=255)
         cGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCga                                                                                <  1:3883913/93‑1 (MQ=255)
         cGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCga                                                                                <  1:4155553/93‑1 (MQ=255)
          ggACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgag                                                                               <  2:683761/93‑1 (MQ=255)
            aCAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgaggg                                                                             <  2:6236439/93‑1 (MQ=255)
            aCAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgaggg                                                                             <  1:4892801/93‑1 (MQ=255)
              aaCCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagggag                                                                           <  1:3240467/93‑1 (MQ=255)
               aCCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagggagg                                                                          >  2:6679828/1‑93 (MQ=255)
               aCCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagggagg                                                                          >  2:9589577/1‑93 (MQ=255)
                ccGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGggagga                                                                         >  2:197340/1‑93 (MQ=255)
                 cGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGTAGGaa                                                                        >  1:6829539/1‑93 (MQ=255)
                 cGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGaa                                                                        <  1:858308/93‑1 (MQ=255)
                  gagaATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAat                                                                       >  2:4269206/1‑93 (MQ=255)
                   agaATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAata                                                                      >  1:7495429/1‑93 (MQ=255)
                     aaTTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATc                                                                    >  1:8325893/1‑93 (MQ=255)
                       tttCCTGCGCTTTGGCAATACAATCACCCGCACTGACGGCAAGGCGTAACGTCGCCGTCGCGACAACAAGAATTTGCGAGGGATGAATATCtt                                                                  <  2:8527497/93‑1 (MQ=255)
                       tttCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCtt                                                                  >  2:8832396/1‑93 (MQ=255)
                       tttCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCtt                                                                  <  1:5221044/93‑1 (MQ=255)
                       tttCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCtt                                                                  >  2:9059505/1‑93 (MQ=255)
                         tCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATCTCTTGc                                                                >  1:2716782/1‑93 (MQ=255)
                          ccTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCa                                                               <  1:4526894/93‑1 (MQ=255)
                          ccTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCa                                                               <  2:873617/93‑1 (MQ=255)
                          ccTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCa                                                               <  2:7760889/93‑1 (MQ=255)
                            tGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGa                                                             >  1:2466057/1‑93 (MQ=255)
                            tGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGa                                                             <  2:8049897/93‑1 (MQ=255)
                             gcgcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGAc                                                            <  1:5853315/93‑1 (MQ=255)
                             gcgcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGAc                                                            <  2:9417267/93‑1 (MQ=255)
                             gcgcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGAc                                                            <  2:2453420/93‑1 (MQ=255)
                             gcgcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGAc                                                            >  2:1425204/1‑93 (MQ=255)
                               gcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGt                                                          >  1:2023840/1‑93 (MQ=255)
                                cTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACTAATTTGCGAGGGAGGAATATCTTGCAGACGtt                                                         <  1:6296635/93‑1 (MQ=255)
                                cTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGtt                                                         <  1:2207367/93‑1 (MQ=255)
                                 tttGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTc                                                        >  1:10008069/1‑93 (MQ=255)
                                    ggCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGc                                                     <  1:7785752/93‑1 (MQ=255)
                                     gCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCa                                                    <  2:1707070/93‑1 (MQ=255)
                                     gCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCa                                                    >  2:157729/1‑93 (MQ=255)
                                        aTAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAc                                                 <  1:6938872/93‑1 (MQ=255)
                                        aTAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAc                                                 >  2:6997950/1‑93 (MQ=255)
                                         tAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACa                                                >  2:8157434/1‑93 (MQ=255)
                                         tAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGACGGAGGAATATCTTGCAGACGCTCAGCAAACa                                                >  2:537841/1‑93 (MQ=255)
                                          aaaaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAg                                               <  2:4448586/93‑1 (MQ=255)
                                           aaaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAgg                                              >  1:7592050/1‑93 (MQ=255)
                                           aaaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAgg                                              <  1:941953/93‑1 (MQ=255)
                                           aaaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAgg                                              <  2:3481948/93‑1 (MQ=255)
                                            aaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGgc                                             >  1:928965/1‑93 (MQ=255)
                                            aaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGgc                                             >  2:1868360/1‑93 (MQ=255)
                                             aTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGgcg                                            >  2:3218694/1‑93 (MQ=255)
                                                 gccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCaaa                                        >  1:2537475/2‑93 (MQ=255)
                                                 cccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCaaa                                        >  2:5917175/1‑93 (MQ=255)
                                                 cccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCaaa                                        >  2:1768966/1‑93 (MQ=255)
                                                  ccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCACACAGGCGCAAAc                                       >  2:3726332/1‑93 (MQ=255)
                                                  ccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAAc                                       <  2:7299165/93‑1 (MQ=255)
                                                  ccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAAc                                       <  1:4241197/93‑1 (MQ=255)
                                                  ccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAAc                                       >  1:6094937/1‑93 (MQ=255)
                                                   cGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACa                                      >  2:121375/1‑93 (MQ=255)
                                                   cGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACa                                      <  2:2034265/93‑1 (MQ=255)
                                                   cGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACa                                      <  1:9801577/93‑1 (MQ=255)
                                                   cGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACa                                      >  2:266207/1‑93 (MQ=255)
                                                   cGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACa                                      <  2:9177315/93‑1 (MQ=255)
                                                    gCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAt                                     >  1:4836802/1‑93 (MQ=255)
                                                     cATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAtt                                    <  2:7959510/93‑1 (MQ=255)
                                                     cATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAtt                                    <  2:4794697/93‑1 (MQ=255)
                                                      aTTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTg                                   >  2:2353323/1‑93 (MQ=255)
                                                       ttGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGc                                  <  1:9098786/93‑1 (MQ=255)
                                                        tGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGcc                                 >  2:1481888/1‑93 (MQ=255)
                                                           cGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAAc                              <  1:4460920/93‑1 (MQ=255)
                                                           cGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAAc                              <  2:9783662/93‑1 (MQ=255)
                                                            ggCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAAcc                             <  1:5935987/93‑1 (MQ=255)
                                                             gCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACcg                            >  2:8406159/1‑93 (MQ=255)
                                                              cAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACcgc                           >  2:55733/1‑93 (MQ=255)
                                                                aGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCgcgc                         >  2:3107956/1‑93 (MQ=255)
                                                                aGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCgcgc                         <  1:5642467/93‑1 (MQ=255)
                                                                aGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCgcgc                         >  1:1848096/1‑93 (MQ=255)
                                                                     tAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAt                    <  1:1712819/93‑1 (MQ=255)
                                                                     tAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAt                    >  1:6611138/1‑93 (MQ=255)
                                                                     tAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAt                    >  1:3513263/1‑93 (MQ=255)
                                                                       acgtCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTg                  >  1:3631731/4‑93 (MQ=255)
                                                                         gtCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCt                >  1:8361719/2‑93 (MQ=255)
                                                                            gCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCa             >  1:1177117/1‑93 (MQ=255)
                                                                            gCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCa             <  1:899887/93‑1 (MQ=255)
                                                                             ccGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCAt            >  1:3114095/1‑93 (MQ=255)
                                                                              cGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCAtt           <  1:1606535/93‑1 (MQ=255)
                                                                              cGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCAtt           <  1:549808/93‑1 (MQ=255)
                                                                              cGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCAtt           <  1:9593965/93‑1 (MQ=255)
                                                                               gTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTg          >  2:4974743/1‑93 (MQ=255)
                                                                                tAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTgg         >  2:10004907/1‑93 (MQ=255)
                                                                                tAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCACAAACATTGCCAACCGCGCTCCATTGCTTCATTgg         >  2:2239626/1‑93 (MQ=255)
                                                                                 aGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGga        >  1:1468372/1‑93 (MQ=255)
                                                                                  gCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTCgag       >  2:6068061/1‑93 (MQ=255)
                                                                                   cGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGgaga      <  1:8147845/93‑1 (MQ=255)
                                                                                   cGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGgaga      <  1:8037129/93‑1 (MQ=255)
                                                                                   cGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGgaga      <  2:5160588/93‑1 (MQ=255)
                                                                                   cGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGgaga      >  2:5753504/1‑93 (MQ=255)
                                                                                     acaacaCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAgg    >  2:7547643/1‑93 (MQ=255)
                                                                                     acaacaCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGACAACCGCGCTCCATTGCTTCATTGGAGAgg    >  1:3028786/1‑93 (MQ=255)
                                                                                       aaCACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTCCCAACCGCGCTCCATTGCTTCATTGGAGAggga  >  2:2874354/1‑92 (MQ=255)
                                                                                          |                                                                                         
CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGC  >  NC_000913/3961515‑3961694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 297 total aligned reads displayed.
GATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCATTT  >  NC_000913/3961512‑3961698
                                                                                             |                                                                                             
GATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACA                                                                                               >  SRR4302540.7966041/1‑94 (MQ=60)
GATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACA                                                                                               >  SRR4302540.9174629/1‑94 (MQ=60)
 ATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACAC                                                                                              >  SRR4302540.6769970/1‑94 (MQ=60)
 ATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACAC                                                                                              >  SRR4302540.2927641/1‑94 (MQ=60)
  TCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACG                                                                                             <  SRR4302540.521965/94‑1 (MQ=60)
  TCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACG                                                                                             <  SRR4302540.8656069/94‑1 (MQ=60)
  TCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACG                                                                                             >  SRR4302540.10008951/1‑94 (MQ=60)
  TCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACG                                                                                             <  SRR4302540.4468600/94‑1 (MQ=60)
   CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGA                                                                                            >  SRR4302540.4931812/1‑94 (MQ=60)
   CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGA                                                                                            >  SRR4302540.2915575/1‑94 (MQ=60)
   CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGA                                                                                            >  SRR4302540.5833290/1‑94 (MQ=60)
   CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGA                                                                                            <  SRR4302540.10064636/94‑1 (MQ=60)
     CCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAAT                                                                                          <  SRR4302540.137035/94‑1 (MQ=60)
     CCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAAT                                                                                          <  SRR4302540.7371488/94‑1 (MQ=60)
       TGTGCCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTT                                                                                        <  SRR4302540.3088956/94‑1 (MQ=60)
       TGTCCCGGCCAACCGAGAATTTCCTGCGCGTTGGCAATAAAATCACCCGAATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTT                                                                                        <  SRR4302540.6291976/94‑1 (MQ=60)
       TGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTT                                                                                        <  SRR4302540.7328530/94‑1 (MQ=60)
        GTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTG                                                                                       >  SRR4302540.7174798/1‑94 (MQ=60)
         TACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGC                                                                                      >  SRR4302540.8429234/1‑94 (MQ=60)
          ACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCG                                                                                     <  SRR4302540.10029899/94‑1 (MQ=60)
          ACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCG                                                                                     <  SRR4302540.10110288/94‑1 (MQ=60)
          ACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCG                                                                                     <  SRR4302540.8374571/94‑1 (MQ=60)
           CCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGA                                                                                    <  SRR4302540.3749147/94‑1 (MQ=60)
           CCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGA                                                                                    >  SRR4302540.6053942/1‑94 (MQ=60)
            CGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAG                                                                                   <  SRR4302540.4200572/94‑1 (MQ=60)
            CGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAG                                                                                   <  SRR4302540.3926108/94‑1 (MQ=60)
             GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGG                                                                                  <  SRR4302540.8863354/94‑1 (MQ=60)
             GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGG                                                                                  >  SRR4302540.5242449/1‑94 (MQ=60)
             GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGG                                                                                  <  SRR4302540.1716904/94‑1 (MQ=60)
              GACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGG                                                                                 <  SRR4302540.314952/94‑1 (MQ=60)
              GACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGG                                                                                 <  SRR4302540.7990622/94‑1 (MQ=60)
              GACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGG                                                                                 <  SRR4302540.4579336/94‑1 (MQ=60)
               ACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGA                                                                                <  SRR4302540.4490621/94‑1 (MQ=60)
                CAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAG                                                                               <  SRR4302540.5595059/94‑1 (MQ=60)
                 AACCGAGAATTTCCTGCGCTTTGGCAATAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGG                                                                              <  SRR4302540.3740316/94‑1 (MQ=60)
                 AACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGG                                                                              >  SRR4302540.9374233/1‑94 (MQ=60)
                 AACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGG                                                                              <  SRR4302540.8358608/94‑1 (MQ=60)
                 AACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGG                                                                              >  SRR4302540.813267/1‑94 (MQ=60)
                 AACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGG                                                                              <  SRR4302540.3275731/94‑1 (MQ=60)
                   CCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGTAGGAA                                                                            >  SRR4302540.6905159/1‑94 (MQ=60)
                   CCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAA                                                                            >  SRR4302540.5937649/1‑94 (MQ=60)
                    CGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAAT                                                                           <  SRR4302540.867424/94‑1 (MQ=60)
                    CGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAAT                                                                           >  SRR4302540.4218549/1‑94 (MQ=60)
                    CGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAAT                                                                           >  SRR4302540.2533198/1‑94 (MQ=60)
                    CGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAAT                                                                           <  SRR4302540.8450944/94‑1 (MQ=60)
                     GAGCATTTCCTGCGCTTTGGCAATAATATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGcatt                                                                          >  SRR4302540.7579147/1‑90 (MQ=60)
                     GAGAATTTCCTGCTCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATA                                                                          <  SRR4302540.2411844/94‑1 (MQ=60)
                     GAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATA                                                                          >  SRR4302540.7579148/1‑94 (MQ=60)
                     GAGAATTTCCTGCGCTTGTGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATA                                                                          <  SRR4302540.8021088/94‑1 (MQ=60)
                      AGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATAT                                                                         <  SRR4302540.9442857/94‑1 (MQ=60)
                      AGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATAT                                                                         <  SRR4302540.9442858/94‑1 (MQ=60)
                      AGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATAT                                                                         >  SRR4302540.7489638/1‑94 (MQ=60)
                      AGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATAT                                                                         >  SRR4302540.4987845/1‑94 (MQ=60)
                       GAATTTCGTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATC                                                                        <  SRR4302540.1051577/94‑1 (MQ=60)
                       GAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATC                                                                        >  SRR4302540.3995862/1‑94 (MQ=60)
                       GAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATC                                                                        >  SRR4302540.8422523/1‑94 (MQ=60)
                       GAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATC                                                                        <  SRR4302540.9365308/94‑1 (MQ=60)
                        AATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCT                                                                       >  SRR4302540.9765254/1‑94 (MQ=60)
                         ATTTCCTGCGCTTTGGCATTAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTG                                                                      >  SRR4302540.9891861/1‑94 (MQ=60)
                         ATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTT                                                                      <  SRR4302540.8219715/94‑1 (MQ=60)
                         ATTTCCTGCGCTGTGGCAATAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTT                                                                      <  SRR4302540.1969025/94‑1 (MQ=60)
                          TTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTG                                                                     <  SRR4302540.6850895/94‑1 (MQ=60)
                           TTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATCTCTTGC                                                                    >  SRR4302540.2746078/1‑94 (MQ=60)
                             CCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAG                                                                  <  SRR4302540.8566582/94‑1 (MQ=60)
                             CCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAG                                                                  <  SRR4302540.4575905/94‑1 (MQ=60)
                              CTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGA                                                                 >  SRR4302540.2151887/1‑94 (MQ=60)
                                GCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACG                                                               <  SRR4302540.5918052/94‑1 (MQ=60)
                                 CGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGT                                                              >  SRR4302540.3115466/1‑94 (MQ=60)
                                 CGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGT                                                              >  SRR4302540.2045709/1‑94 (MQ=60)
                                  GCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTT                                                             >  SRR4302540.7871400/1‑94 (MQ=60)
                                  GCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTT                                                             >  SRR4302540.7871399/1‑94 (MQ=60)
                                  GCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTT                                                             >  SRR4302540.705596/1‑94 (MQ=60)
                                  GCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTT                                                             >  SRR4302540.4547185/1‑94 (MQ=60)
                                   CTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACTAATTTGCGAGGGAGGAATATCTTGCAGACGTTC                                                            <  SRR4302540.6366748/94‑1 (MQ=60)
                                   CTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTC                                                            >  SRR4302540.2443129/1‑94 (MQ=60)
                                   CTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTC                                                            >  SRR4302540.10124621/1‑94 (MQ=60)
                                   CTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTC                                                            <  SRR4302540.2231209/94‑1 (MQ=60)
                                   CTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTC                                                            >  SRR4302540.6385212/1‑94 (MQ=60)
                                    TTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCA                                                           <  SRR4302540.8030408/94‑1 (MQ=60)
                                     TTGGCAATAAAATCTCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGATAACACGAATTTGCGAGGCAGGAATATCTTGCAGACGTTCAG                                                          <  SRR4302540.1798506/94‑1 (MQ=60)
                                     TTGACAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTGGCGACAACACAAATTTGCGAGGGAGGAATATCTTGCAGATGTTCAG                                                          <  SRR4302540.1798270/94‑1 (MQ=60)
                                      TGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGC                                                         >  SRR4302540.597588/1‑94 (MQ=60)
                                      TGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGA                                                         >  SRR4302540.7638567/1‑94 (MQ=60)
                                       GGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCA                                                        <  SRR4302540.6272322/94‑1 (MQ=60)
                                         CAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAA                                                      >  SRR4302540.2443373/1‑94 (MQ=60)
                                         CAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAA                                                      >  SRR4302540.6066560/1‑94 (MQ=60)
                                         CAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAA                                                      >  SRR4302540.3768069/1‑94 (MQ=60)
                                          AATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAA                                                     >  SRR4302540.8181399/1‑94 (MQ=60)
                                           ATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACA                                                    <  SRR4302540.7016106/94‑1 (MQ=60)
                                           ATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACA                                                    >  SRR4302540.6170514/1‑94 (MQ=60)
                                            TAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAG                                                   <  SRR4302540.7796181/94‑1 (MQ=60)
                                            AAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAG                                                   <  SRR4302540.7796319/94‑1 (MQ=60)
                                             AAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGG                                                  >  SRR4302540.7677329/1‑94 (MQ=60)
                                             AAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGG                                                  <  SRR4302540.5931681/94‑1 (MQ=60)
                                              AAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGC                                                 <  SRR4302540.6977599/94‑1 (MQ=60)
                                              AAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGC                                                 <  SRR4302540.951791/94‑1 (MQ=60)
                                               AATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCG                                                <  SRR4302540.2745438/94‑1 (MQ=60)
                                               AATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCG                                                >  SRR4302540.9116854/1‑94 (MQ=60)
                                               AATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCG                                                <  SRR4302540.3805169/94‑1 (MQ=60)
                                                ATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGC                                               >  SRR4302540.6211484/1‑94 (MQ=60)
                                                  CACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAtgcggta                                             >  SRR4302540.3194083/1‑87 (MQ=60)
                                                  CACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAA                                             >  SRR4302540.1400987/1‑94 (MQ=60)
                                                   AGCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAA                                            >  SRR4302540.2564839/1‑94 (MQ=60)
                                                   ACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAA                                            >  SRR4302540.6699379/1‑94 (MQ=60)
                                                   ACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAA                                            >  SRR4302540.6869530/1‑94 (MQ=60)
                                                   ACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAA                                            >  SRR4302540.4319985/1‑94 (MQ=60)
                                                    CCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAAC                                           <  SRR4302540.2619445/94‑1 (MQ=60)
                                                     CCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACA                                          <  SRR4302540.4287338/94‑1 (MQ=60)
                                                      CGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT                                         <  SRR4302540.2071540/94‑1 (MQ=60)
                                                      CGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT                                         >  SRR4302540.251028/1‑94 (MQ=60)
                                                      CGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT                                         >  SRR4302540.4888616/1‑94 (MQ=60)
                                                      CACATGGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT                                         <  SRR4302540.1682385/94‑1 (MQ=60)
                                                       GCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATT                                        <  SRR4302540.8483008/94‑1 (MQ=60)
                                                       GCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATT                                        >  SRR4302540.4649676/1‑94 (MQ=60)
                                                        CATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTG                                       <  SRR4302540.3333920/94‑1 (MQ=60)
                                                         ATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGC                                      >  SRR4302540.359671/1‑94 (MQ=60)
                                                         ATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGC                                      >  SRR4302540.6929101/1‑94 (MQ=60)
                                                          TTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCC                                     <  SRR4302540.9208110/94‑1 (MQ=60)
                                                          TTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCC                                     <  SRR4302540.3019340/94‑1 (MQ=60)
                                                          TTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCC                                     >  SRR4302540.5458611/1‑94 (MQ=60)
                                                          TTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCC                                     <  SRR4302540.5558160/94‑1 (MQ=60)
                                                          TTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCC                                     <  SRR4302540.9208109/94‑1 (MQ=60)
                                                          TTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCC                                     <  SRR4302540.826815/94‑1 (MQ=60)
                                                           TGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCA                                    >  SRR4302540.7618618/1‑94 (MQ=60)
                                                           TGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCA                                    >  SRR4302540.4658108/1‑94 (MQ=60)
                                                            GACGGCAAGGCGTAACGTCGCCGTAGCGACAACACAAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAA                                   <  SRR4302540.4087022/94‑1 (MQ=60)
                                                             ACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAAC                                  >  SRR4302540.3734143/1‑94 (MQ=60)
                                                              CGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACC                                 <  SRR4302540.4509282/94‑1 (MQ=60)
                                                              CGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACC                                 <  SRR4302540.446390/94‑1 (MQ=60)
                                                               GGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG                                <  SRR4302540.279084/94‑1 (MQ=60)
                                                               GGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG                                <  SRR4302540.5009504/94‑1 (MQ=60)
                                                               GGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG                                >  SRR4302540.9592/1‑94 (MQ=60)
                                                               GGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG                                <  SRR4302540.1737452/94‑1 (MQ=60)
                                                               GGCAAGGCGTAACCTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG                                >  SRR4302540.9593/1‑94 (MQ=60)
                                                                 CAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCG                              >  SRR4302540.6447477/1‑94 (MQ=60)
                                                                 CAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCG                              <  SRR4302540.5711498/94‑1 (MQ=60)
                                                                  AAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAACCAGGCGCAAACATTGCCAACCGCGC                             >  SRR4302540.1868371/1‑94 (MQ=60)
                                                                  AAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGC                             >  SRR4302540.1500812/1‑94 (MQ=60)
                                                                  AAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGC                             >  SRR4302540.1868370/1‑94 (MQ=60)
                                                                   AGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCT                            <  SRR4302540.5704571/94‑1 (MQ=60)
                                                                   AGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAACAAACAGGCGCAAACATTGCCAACCGCGCT                            <  SRR4302540.5867105/94‑1 (MQ=60)
                                                                    GGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTC                           >  SRR4302540.6685603/1‑94 (MQ=60)
                                                                    GGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTC                           <  SRR4302540.9167724/94‑1 (MQ=60)
                                                                      CGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCA                         >  SRR4302540.2671670/1‑94 (MQ=60)
                                                                       GTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAT                        <  SRR4302540.7088066/94‑1 (MQ=60)
                                                                       GTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAT                        <  SRR4302540.9734045/94‑1 (MQ=60)
                                                                        TAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATT                       <  SRR4302540.1731325/94‑1 (MQ=60)
                                                                        TAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATT                       <  SRR4302540.3204045/94‑1 (MQ=60)
                                                                        TAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATT                       <  SRR4302540.9223916/94‑1 (MQ=60)
                                                                        TAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATT                       <  SRR4302540.1146504/94‑1 (MQ=60)
                                                                         AACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTG                      >  SRR4302540.3671480/1‑94 (MQ=60)
                                                                         AACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTG                      >  SRR4302540.3671482/1‑94 (MQ=60)
                                                                           CGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCT                    >  SRR4302540.8458755/1‑94 (MQ=60)
                                                                           CGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCT                    <  SRR4302540.4233855/94‑1 (MQ=60)
                                                                           CGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCT                    <  SRR4302540.249390/94‑1 (MQ=60)
                                                                            GTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTT                   >  SRR4302540.4228979/1‑94 (MQ=60)
                                                                              CGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCT                 >  SRR4302540.2870989/1‑94 (MQ=60)
                                                                              CGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCA                 >  SRR4302540.1189282/1‑94 (MQ=60)
                                                                              CGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCA                 >  SRR4302540.1603497/1‑94 (MQ=60)
                                                                              CGCCGTAACGACAATACGAATTTGTGAGGGAGTAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCA                 <  SRR4302540.1916417/94‑1 (MQ=60)
                                                                               GCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCAT                <  SRR4302540.909451/94‑1 (MQ=60)
                                                                               GCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCAT                >  SRR4302540.3148146/1‑94 (MQ=60)
                                                                               GCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCAT                <  SRR4302540.5599308/94‑1 (MQ=60)
                                                                               GCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCAT                <  SRR4302540.311803/94‑1 (MQ=60)
                                                                               CCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCAT                <  SRR4302540.9499631/94‑1 (MQ=60)
                                                                                GCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATT               <  SRR4302540.6063040/94‑1 (MQ=60)
                                                                                CCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATT               <  SRR4302540.1560559/94‑1 (MQ=60)
                                                                                CCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATT               >  SRR4302540.9682873/1‑94 (MQ=60)
                                                                                 CGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTG              >  SRR4302540.2339176/1‑94 (MQ=60)
                                                                                 CGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTG              <  SRR4302540.9707181/94‑1 (MQ=60)
                                                                                 CGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTG              <  SRR4302540.1624117/94‑1 (MQ=60)
                                                                                 CGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTG              >  SRR4302540.6489047/1‑94 (MQ=60)
                                                                                 CGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTG              >  SRR4302540.2994205/1‑94 (MQ=60)
                                                                                 CGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTG              <  SRR4302540.555794/94‑1 (MQ=60)
                                                                                 CGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTG              <  SRR4302540.8829902/94‑1 (MQ=60)
                                                                                  GTAGCGACAACACGAATTTGCGAGGTAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGG             <  SRR4302540.4940593/94‑1 (MQ=60)
                                                                                  GTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGG             <  SRR4302540.3380372/94‑1 (MQ=60)
                                                                                  GTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGG             >  SRR4302540.553551/1‑94 (MQ=60)
                                                                                   TAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGA            <  SRR4302540.4925856/94‑1 (MQ=60)
                                                                                   TAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGA            >  SRR4302540.1484401/1‑94 (MQ=60)
                                                                                      CGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAG         <  SRR4302540.3550106/94‑1 (MQ=60)
                                                                                      CGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAG         <  SRR4302540.4537570/94‑1 (MQ=60)
                                                                                      CGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAG         <  SRR4302540.8242431/94‑1 (MQ=60)
                                                                                      CGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAG         >  SRR4302540.6038805/1‑94 (MQ=60)
                                                                                       GACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGG        <  SRR4302540.3872694/94‑1 (MQ=60)
                                                                                       GACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGG        >  SRR4302540.3663784/1‑94 (MQ=60)
                                                                                       GACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGACAACCGCGCTCCATTGCTTCATTGGAGAGG        >  SRR4302540.3062052/1‑94 (MQ=60)
                                                                                        ACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGG       >  SRR4302540.8556485/1‑94 (MQ=60)
                                                                                         CAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGC      <  SRR4302540.4973825/94‑1 (MQ=60)
                                                                                          AACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCT     >  SRR4302540.8214993/1‑94 (MQ=60)
                                                                                          AACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCA     >  SRR4302540.1231138/1‑94 (MQ=60)
                                                                                          AACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCA     >  SRR4302540.2155762/1‑94 (MQ=60)
                                                                                           ACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCAT    <  SRR4302540.3581639/94‑1 (MQ=60)
                                                                                           ACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCAT    >  SRR4302540.403539/1‑94 (MQ=60)
                                                                                           ACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCAT    <  SRR4302540.9333554/94‑1 (MQ=60)
                                                                                           ACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCAT    <  SRR4302540.9815304/94‑1 (MQ=60)
                                                                                            CACGAATTTGCGAGGGAGGAATATCCTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCATT   <  SRR4302540.3435306/94‑1 (MQ=60)
                                                                                             ACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCATTT  <  SRR4302540.7674103/94‑1 (MQ=60)
                                                                                             ACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCATTT  >  SRR4302540.1543117/1‑94 (MQ=60)
                                                                                             ACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCATTT  >  SRR4302540.3399150/1‑94 (MQ=60)
                                                                                             |                                                                                             
GATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTTCATTGGAGAGGGCATTT  >  NC_000913/3961512‑3961698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: