Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,980,918 2 bp→CG coding (348‑349/1236 nt) aslB → putative arylsulfatase regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,980,9180GC100.0% 1363.9 / NA 420W116C (TGG→TGC) aslBputative arylsulfatase regulator
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (197/223);  total (197/223)
*NC_0009133,980,9190CG100.0% 1372.3 / NA 427P117A (CCG→GCG) aslBputative arylsulfatase regulator
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (200/227);  total (200/227)

Only 100 of 440 total aligned reads displayed.

CGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT  >  NC_000913/3980831‑3981005
                                                                                       ||                                                                                      
cgtAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGtt                                                                                    >  1:3560532/1‑93 (MQ=255)
 gtAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGttt                                                                                   >  1:1220237/1‑93 (MQ=255)
 gtAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGttt                                                                                   >  1:10020137/1‑93 (MQ=255)
 gtAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGttt                                                                                   >  2:9299484/1‑93 (MQ=255)
  tAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtc                                                                                  >  2:8574344/1‑93 (MQ=255)
  tAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtc                                                                                  >  1:2133937/1‑93 (MQ=255)
   aGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtct                                                                                 <  1:7704976/93‑1 (MQ=255)
    gcgcTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtctc                                                                                <  2:6630771/93‑1 (MQ=255)
    gcgcTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtctc                                                                                <  2:1867371/93‑1 (MQ=255)
    gcgcTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtctc                                                                                <  2:9141160/93‑1 (MQ=255)
    gcgcTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGAATGACGAATGGGGCGGGTTtctc                                                                                >  2:5537702/1‑93 (MQ=255)
     cgcTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTcg                                                                               <  2:8085249/93‑1 (MQ=255)
     cgcTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTcg                                                                               >  2:8769954/1‑93 (MQ=255)
      gcTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTcgc                                                                              <  1:6195053/93‑1 (MQ=255)
        tACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCgg                                                                            >  2:1717670/1‑93 (MQ=255)
        tACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCgg                                                                            >  1:6775381/1‑93 (MQ=255)
         aCAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCggg                                                                           >  2:5320169/1‑92 (MQ=255)
         aCAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGa                                                                           <  1:3071194/93‑1 (MQ=255)
          cAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAg                                                                          <  2:6784465/93‑1 (MQ=255)
           aGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGc                                                                         <  2:6376983/93‑1 (MQ=255)
            ggCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGca                                                                        >  2:7044585/1‑93 (MQ=255)
               gAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGcatca                                                                     <  2:4896487/93‑1 (MQ=255)
                  atatGGTGCTGGCAGGAAGTTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAttt                                                                  >  1:7928300/1‑93 (MQ=255)
                  atatGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAttt                                                                  <  1:1328425/93‑1 (MQ=255)
                   tatGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtttt                                                                 >  1:5015516/1‑93 (MQ=255)
                   tatGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtttt                                                                 >  1:9006224/1‑93 (MQ=255)
                    atGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTc                                                                <  2:201908/93‑1 (MQ=255)
                    atGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTc                                                                >  1:395015/1‑93 (MQ=255)
                      ggTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCtt                                                              <  1:7177807/93‑1 (MQ=255)
                       gTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttg                                                             >  1:4613891/1‑93 (MQ=255)
                       gTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttg                                                             >  1:1681436/1‑93 (MQ=255)
                       gTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttg                                                             <  2:7087355/93‑1 (MQ=255)
                        tGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttgt                                                            <  2:39984/93‑1 (MQ=255)
                         gCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttgtt                                                           >  1:609818/1‑93 (MQ=255)
                          cTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttgttg                                                          <  1:1419467/93‑1 (MQ=255)
                           tGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTgg                                                         <  1:737106/93‑1 (MQ=255)
                           tGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGCGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTgg                                                         >  2:3638322/1‑93 (MQ=255)
                             gCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGtt                                                       <  1:5871817/93‑1 (MQ=255)
                             gCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGtt                                                       >  1:8878803/1‑93 (MQ=255)
                              cAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGttt                                                      <  2:6486445/93‑1 (MQ=255)
                                ggAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGtttgt                                                    <  1:527685/93‑3 (MQ=255)
                                ggAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGGGCGCGTTTCTCGCGGGGCATCATTTTCTTGTTGGtttgt                                                    >  1:9185531/1‑91 (MQ=255)
                                 gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGCGCATCATTTTCTTGTTGGtttgtg                                                   >  1:2435198/1‑90 (MQ=255)
                                 gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTc                                                   >  2:10032787/1‑93 (MQ=255)
                                 gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTc                                                   >  2:3595319/1‑93 (MQ=255)
                                     aTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTg                                               >  2:9496920/1‑93 (MQ=255)
                                     aTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTg                                               <  2:7964010/93‑1 (MQ=255)
                                      tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTgg                                              >  2:9690039/1‑93 (MQ=255)
                                      tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTgg                                              >  2:2511439/1‑93 (MQ=255)
                                      tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTgg                                              <  2:1615226/93‑1 (MQ=255)
                                      tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTgg                                              <  1:4123670/93‑1 (MQ=255)
                                       aaGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGa                                             <  2:832064/93‑1 (MQ=255)
                                       aaGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGa                                             <  1:6381393/93‑1 (MQ=255)
                                       aaGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGa                                             <  1:8723022/93‑1 (MQ=255)
                                       aaGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGa                                             <  2:4235750/93‑1 (MQ=255)
                                       aaGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGa                                             <  1:8565044/93‑1 (MQ=255)
                                        aGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAt                                            >  1:8373972/1‑93 (MQ=255)
                                         gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATg                                           >  2:7710945/1‑93 (MQ=255)
                                          tAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGCGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATgg                                          >  1:2607013/1‑93 (MQ=255)
                                            aCAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGcc                                        <  1:480175/93‑1 (MQ=255)
                                             cAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGccc                                       <  2:5641263/93‑1 (MQ=255)
                                             cAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGccc                                       <  2:7475452/93‑1 (MQ=255)
                                               gCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGc                                     >  2:9194588/1‑93 (MQ=255)
                                                cTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGcc                                    <  1:7534954/93‑1 (MQ=255)
                                                 ttCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGGCCGCCt                                   >  2:5079836/1‑93 (MQ=255)
                                                  tCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTg                                  >  1:4023359/1‑93 (MQ=255)
                                                  tCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGACCGCCTg                                  >  2:9605124/1‑93 (MQ=255)
                                                   ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga                                 >  2:1228193/1‑93 (MQ=255)
                                                     aGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTgaga                               >  1:63465/1‑93 (MQ=255)
                                                     aGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTgaga                               >  1:5164716/1‑93 (MQ=255)
                                                      gACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAt                              <  1:9929750/93‑1 (MQ=255)
                                                      gACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAt                              <  2:3051536/93‑1 (MQ=255)
                                                       aCTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATc                             >  1:9507938/1‑93 (MQ=255)
                                                             ggCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATTGACCGCCTGAGATCCAcaat                       >  2:1441131/1‑93 (MQ=255)
                                                             ggCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaat                       <  2:4620094/93‑1 (MQ=255)
                                                              gCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatc                      >  1:3264463/1‑93 (MQ=255)
                                                                gTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaa                    >  1:3375598/1‑93 (MQ=255)
                                                                 tgctgcTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAccatcaat                   >  2:4408829/1‑93 (MQ=255)
                                                                 tgctgcTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaat                   >  1:3729843/1‑93 (MQ=255)
                                                                 tgctgcTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaat                   >  1:6917388/1‑93 (MQ=255)
                                                                 tgctgcTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaat                   <  1:8051221/93‑1 (MQ=255)
                                                                  gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAata                  <  1:2959014/93‑1 (MQ=255)
                                                                  gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAata                  >  2:3355596/1‑93 (MQ=255)
                                                                  gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAata                  >  1:3479433/1‑93 (MQ=255)
                                                                   ctgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAatat                 <  2:9835614/93‑1 (MQ=255)
                                                                   ctgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAatat                 >  1:6020329/1‑93 (MQ=255)
                                                                    tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc                >  2:7604359/1‑93 (MQ=255)
                                                                    tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc                <  1:1905834/93‑1 (MQ=255)
                                                                      ctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcgc              >  1:4400738/1‑93 (MQ=255)
                                                                       tgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcgcg             >  2:5974840/1‑93 (MQ=255)
                                                                       tgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcgcg             <  1:2769248/93‑1 (MQ=255)
                                                                         gATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTg           >  1:940913/1‑93 (MQ=255)
                                                                            gACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACt        >  2:7426408/1‑93 (MQ=255)
                                                                              cGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaa      >  1:5705679/1‑93 (MQ=255)
                                                                              cGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaa      >  2:3146881/1‑93 (MQ=255)
                                                                               gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaaa     >  2:2169921/1‑93 (MQ=255)
                                                                                gaTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAg    <  1:8601151/92‑1 (MQ=255)
                                                                                 aTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATTGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAgg   >  2:5796726/1‑93 (MQ=255)
                                                                                  tggtgcGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAggg  >  2:3777871/1‑92 (MQ=255)
                                                                                  tggtgcGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGt  <  2:4560093/93‑1 (MQ=255)
                                                                                       ||                                                                                      
CGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT  >  NC_000913/3980831‑3981005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 239 total aligned reads displayed.
CCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGG  >  NC_000913/3980825‑3981007
                                                                                             |                                                                                         
CCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGC                                                                                           <  SRR4302540.5431202/94‑1 (MQ=60)
CCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGC                                                                                           <  SRR4302540.113665/94‑1 (MQ=60)
CCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGC                                                                                           <  SRR4302540.2419463/94‑1 (MQ=60)
CCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGC                                                                                           >  SRR4302540.8915159/1‑94 (MQ=60)
     CCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTT                                                                                      >  SRR4302540.3185810/1‑94 (MQ=60)
     CCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTT                                                                                      >  SRR4302540.3599427/1‑94 (MQ=60)
     CCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTT                                                                                      <  SRR4302540.2605815/94‑1 (MQ=60)
      CGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTT                                                                                     >  SRR4302540.10136755/1‑94 (MQ=60)
      CGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTT                                                                                     >  SRR4302540.1232724/1‑94 (MQ=60)
       GTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTC                                                                                    >  SRR4302540.8235797/1‑94 (MQ=60)
       GTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTC                                                                                    >  SRR4302540.5297148/1‑94 (MQ=60)
       GTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTC                                                                                    >  SRR4302540.2156845/1‑94 (MQ=60)
       GTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTC                                                                                    <  SRR4302540.6845118/94‑1 (MQ=60)
        TAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACTAATGGTGCGCGTTTCT                                                                                   <  SRR4302540.9406332/94‑1 (MQ=60)
        TAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCT                                                                                   >  SRR4302540.7385684/1‑94 (MQ=60)
         AGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTC                                                                                  <  SRR4302540.7793218/94‑1 (MQ=60)
         AGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTC                                                                                  >  SRR4302540.5954158/1‑94 (MQ=60)
           CGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGC                                                                                >  SRR4302540.1188893/1‑94 (MQ=60)
            GCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCG                                                                               <  SRR4302540.9244623/94‑1 (MQ=60)
            GCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCG                                                                               <  SRR4302540.6383407/94‑1 (MQ=60)
            GCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCG                                                                               <  SRR4302540.4327738/94‑1 (MQ=60)
            GCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCG                                                                               <  SRR4302540.6264026/94‑1 (MQ=60)
            GCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCG                                                                               <  SRR4302540.6264025/94‑1 (MQ=60)
             CTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGG                                                                              >  SRR4302540.6850261/1‑94 (MQ=60)
              TACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGG                                                                             >  SRR4302540.3070498/1‑94 (MQ=60)
               ACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAG                                                                            >  SRR4302540.203899/1‑94 (MQ=60)
               ACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAG                                                                            <  SRR4302540.3104893/94‑1 (MQ=60)
               ACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAG                                                                            <  SRR4302540.9737043/94‑1 (MQ=60)
                CAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCTGAGC                                                                           >  SRR4302540.9791641/1‑94 (MQ=60)
                CAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGC                                                                           >  SRR4302540.3959198/1‑94 (MQ=60)
                CAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGC                                                                           >  SRR4302540.9688000/1‑94 (MQ=60)
                 AGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCA                                                                          >  SRR4302540.8676109/1‑94 (MQ=60)
                 AGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCA                                                                          <  SRR4302540.9538222/94‑1 (MQ=60)
                 AGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCA                                                                          >  SRR4302540.2973727/1‑94 (MQ=60)
                  GGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCAT                                                                         >  SRR4302540.3338266/1‑94 (MQ=60)
                   GCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATC                                                                        >  SRR4302540.5828383/1‑94 (MQ=60)
                   GCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATC                                                                        >  SRR4302540.4375064/1‑94 (MQ=60)
                   GCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATC                                                                        <  SRR4302540.4264665/94‑1 (MQ=60)
                   GCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATC                                                                        <  SRR4302540.4050168/94‑1 (MQ=60)
                    CGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCA                                                                       <  SRR4302540.456156/94‑1 (MQ=60)
                    CGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCA                                                                       <  SRR4302540.1528780/94‑1 (MQ=60)
                     GAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAT                                                                      >  SRR4302540.10099729/1‑94 (MQ=60)
                      AAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATT                                                                     >  SRR4302540.3445559/1‑94 (MQ=60)
                      AAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATT                                                                     >  SRR4302540.5327329/1‑94 (MQ=60)
                       AATATGGTGCTGGCAGGAAGTTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTT                                                                    >  SRR4302540.8020701/1‑94 (MQ=60)
                       AATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGCGCATCATTT                                                                    >  SRR4302540.5927858/1‑94 (MQ=60)
                       AATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTT                                                                    <  SRR4302540.5113570/94‑1 (MQ=60)
                       AATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTT                                                                    <  SRR4302540.5980609/94‑1 (MQ=60)
                       AATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTT                                                                    >  SRR4302540.2798341/1‑94 (MQ=60)
                       AATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTT                                                                    <  SRR4302540.9397360/94‑1 (MQ=60)
                        atgtgagaCTGGCAGGAAGATAAGTACCAGCTTCCAGGCTAACGGCGTGCTGCTGGATGACTAATGGTGCGCGTTTCTCGCGGAGCATCATTTT                                                                   <  SRR4302540.1341960/86‑1 (MQ=60)
                        ATATGGTGCTGGCAGGAAGATAAGTAACCGCTTCCAGACTAACGGCGTGCTGCTGGCTGACGAATGCGGCGCGTTTATCGCGGAGCATCACTTT                                                                   >  SRR4302540.45298/1‑94 (MQ=60)
                        ATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTT                                                                   >  SRR4302540.2865140/1‑94 (MQ=60)
                        ATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTT                                                                   >  SRR4302540.5069821/1‑94 (MQ=60)
                        ATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTT                                                                   <  SRR4302540.1342301/94‑1 (MQ=60)
                        ATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTT                                                                   >  SRR4302540.9502415/1‑94 (MQ=60)
                         TATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTC                                                                  >  SRR4302540.298880/1‑94 (MQ=60)
                         TATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTC                                                                  >  SRR4302540.399106/1‑94 (MQ=60)
                          ATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCT                                                                 <  SRR4302540.7090636/94‑1 (MQ=60)
                          ATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCT                                                                 >  SRR4302540.6717133/1‑94 (MQ=60)
                           TGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTT                                                                <  SRR4302540.3419110/94‑1 (MQ=60)
                           TGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTT                                                                <  SRR4302540.6177442/94‑1 (MQ=60)
                            GGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTG                                                               >  SRR4302540.4663397/1‑94 (MQ=60)
                            GGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTG                                                               <  SRR4302540.868037/94‑1 (MQ=60)
                             GTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGT                                                              <  SRR4302540.8471810/94‑1 (MQ=60)
                              TGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTT                                                             >  SRR4302540.7594875/1‑94 (MQ=60)
                              TGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTT                                                             <  SRR4302540.8538460/94‑1 (MQ=60)
                              GGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTT                                                             <  SRR4302540.8744784/94‑1 (MQ=60)
                                CTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGG                                                           <  SRR4302540.1434817/94‑1 (MQ=60)
                                CTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGG                                                           >  SRR4302540.7098191/1‑94 (MQ=60)
                                 TGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGT                                                          <  SRR4302540.5483648/94‑1 (MQ=60)
                                 TGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGT                                                          <  SRR4302540.744980/94‑1 (MQ=60)
                                  GGCAGTAAGATAAGGAACAGCTTCCAGACTGACGGCGGGCTGCTGGATGACGAAGGGTGCGCGTTTCGCGCGGAGCATCATTTTCTTGTTGGTT                                                         <  SRR4302540.1323804/94‑1 (MQ=60)
                                  GGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTT                                                         >  SRR4302540.8981549/1‑94 (MQ=60)
                                   GCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTT                                                        <  SRR4302540.3560815/94‑1 (MQ=60)
                                   GCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTT                                                        <  SRR4302540.5346664/94‑1 (MQ=60)
                                   GCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTT                                                        <  SRR4302540.3560814/94‑1 (MQ=60)
                                   GCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTT                                                        >  SRR4302540.6259859/1‑94 (MQ=60)
                                   GCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTT                                                        <  SRR4302540.5936720/94‑1 (MQ=60)
                                   GCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTT                                                        >  SRR4302540.3680588/1‑94 (MQ=60)
                                    CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTG                                                       <  SRR4302540.4105014/94‑1 (MQ=60)
                                    CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTG                                                       <  SRR4302540.7192666/94‑1 (MQ=60)
                                     AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT                                                      >  SRR4302540.6146705/1‑94 (MQ=60)
                                     AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT                                                      >  SRR4302540.8058044/1‑94 (MQ=60)
                                     AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT                                                      >  SRR4302540.6146704/1‑94 (MQ=60)
                                     AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT                                                      <  SRR4302540.2920045/94‑1 (MQ=60)
                                     AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGGGCGCGTTTCTCGCGGGGCATCATTTTCTTGTTGGTTTGT                                                      >  SRR4302540.9295692/1‑94 (MQ=60)
                                      GGAAGATAAGTAACAGCTTCCAGACTAATGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTGGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                     >  SRR4302540.8685780/1‑94 (MQ=60)
                                      GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGCGCATCATTTTCTTGTTGGTTTgtg                                                     >  SRR4302540.2461430/1‑91 (MQ=60)
                                      GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                     <  SRR4302540.6950824/94‑1 (MQ=60)
                                      GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                     <  SRR4302540.498308/94‑1 (MQ=60)
                                      GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                     <  SRR4302540.5107407/94‑1 (MQ=60)
                                      GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                     <  SRR4302540.6950823/94‑1 (MQ=60)
                                      GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                     <  SRR4302540.6230954/94‑1 (MQ=60)
                                      GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTC                                                     <  SRR4302540.533392/94‑1 (MQ=60)
                                       GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCG                                                    <  SRR4302540.102742/94‑1 (MQ=60)
                                       GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCG                                                    >  SRR4302540.10092806/1‑94 (MQ=60)
                                       GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCG                                                    >  SRR4302540.3004251/1‑94 (MQ=60)
                                          GATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTG                                                 <  SRR4302540.3325695/94‑1 (MQ=60)
                                           ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGG                                                >  SRR4302540.7401338/1‑94 (MQ=60)
                                            TAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGA                                               <  SRR4302540.4168206/94‑1 (MQ=60)
                                             AAGTAACAGCTTCCAGACTAACGGCGTGTTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT                                              <  SRR4302540.2579419/94‑1 (MQ=60)
                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGNTGACGAATGGTGCGCGTTTCTCGCGGAGCATCNNTNNNNTNTTGGTTTnntnnngnnt                                              >  SRR4302540.14306/1‑84 (MQ=60)
                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT                                              >  SRR4302540.8471151/1‑94 (MQ=60)
                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT                                              <  SRR4302540.6452439/94‑1 (MQ=60)
                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT                                              <  SRR4302540.895502/94‑1 (MQ=60)
                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT                                              <  SRR4302540.8824310/94‑1 (MQ=60)
                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT                                              <  SRR4302540.8664509/94‑1 (MQ=60)
                                              AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATG                                             <  SRR4302540.3313417/94‑1 (MQ=60)
                                              AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATG                                             >  SRR4302540.7845550/1‑94 (MQ=60)
                                              AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATG                                             <  SRR4302540.785955/94‑1 (MQ=60)
                                              AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATG                                             <  SRR4302540.8525898/94‑1 (MQ=60)
                                              AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATG                                             <  SRR4302540.255370/94‑1 (MQ=60)
                                               GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGG                                            <  SRR4302540.8041094/94‑1 (MQ=60)
                                               GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGG                                            >  SRR4302540.2424861/1‑94 (MQ=60)
                                               GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGGTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGTATGG                                            >  SRR4302540.10006714/1‑94 (MQ=60)
                                               GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGCGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGG                                            >  SRR4302540.2635147/1‑94 (MQ=60)
                                                  ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCC                                         <  SRR4302540.8409666/94‑1 (MQ=60)
                                                  ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCC                                         <  SRR4302540.485320/94‑1 (MQ=60)
                                                  ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCC                                         <  SRR4302540.1365649/94‑1 (MQ=60)
                                                  ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCC                                         >  SRR4302540.6418003/1‑94 (MQ=60)
                                                   CAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCG                                        >  SRR4302540.5651240/1‑94 (MQ=60)
                                                   CAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCG                                        <  SRR4302540.9618075/94‑1 (MQ=60)
                                                    AGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGC                                       >  SRR4302540.8902592/1‑94 (MQ=60)
                                                     GCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCC                                      <  SRR4302540.1791022/94‑1 (MQ=60)
                                                     GCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCC                                      <  SRR4302540.8897794/94‑1 (MQ=60)
                                                     GCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCC                                      <  SRR4302540.3825886/94‑1 (MQ=60)
                                                      CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT                                     <  SRR4302540.7619346/94‑1 (MQ=60)
                                                      CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT                                     <  SRR4302540.7619620/94‑1 (MQ=60)
                                                       TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTG                                    >  SRR4302540.9266569/1‑94 (MQ=60)
                                                       TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTG                                    >  SRR4302540.4066725/1‑94 (MQ=60)
                                                       TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTG                                    >  SRR4302540.4066724/1‑94 (MQ=60)
                                                        TCCAGACTAACGGCGTGCTGCTGGCTGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGA                                   <  SRR4302540.9099675/94‑1 (MQ=60)
                                                        TCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGA                                   <  SRR4302540.2613892/94‑1 (MQ=60)
                                                        TCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGA                                   <  SRR4302540.2202801/94‑1 (MQ=60)
                                                        TCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGA                                   >  SRR4302540.4748746/1‑94 (MQ=60)
                                                        TCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGA                                   >  SRR4302540.4175818/1‑94 (MQ=60)
                                                         CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAG                                  <  SRR4302540.3691436/94‑1 (MQ=60)
                                                          CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGA                                 <  SRR4302540.898543/94‑1 (MQ=60)
                                                          CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGA                                 >  SRR4302540.5220878/1‑94 (MQ=60)
                                                          CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGA                                 >  SRR4302540.5270654/1‑94 (MQ=60)
                                                          CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGA                                 >  SRR4302540.64104/1‑94 (MQ=60)
                                                          CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGA                                 >  SRR4302540.1502356/1‑94 (MQ=60)
                                                           AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAT                                >  SRR4302540.3190273/1‑94 (MQ=60)
                                                           AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAT                                >  SRR4302540.6374948/1‑94 (MQ=60)
                                                           AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAT                                >  SRR4302540.4873497/1‑94 (MQ=60)
                                                            GACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATC                               <  SRR4302540.10045659/94‑1 (MQ=60)
                                                            GACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATC                               <  SRR4302540.7691973/94‑1 (MQ=60)
                                                            GACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATC                               >  SRR4302540.9620574/1‑94 (MQ=60)
                                                              CTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCA                             >  SRR4302540.511742/1‑94 (MQ=60)
                                                              CTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCA                             >  SRR4302540.2210801/1‑94 (MQ=60)
                                                                   GGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATC                        >  SRR4302540.7492840/1‑94 (MQ=60)
                                                                   GGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATC                        >  SRR4302540.3300081/1‑94 (MQ=60)
                                                                     CGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAA                      >  SRR4302540.6451144/1‑94 (MQ=60)
                                                                     CGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAA                      <  SRR4302540.3549581/94‑1 (MQ=60)
                                                                      GTGCTTCTGGATGACGAATGGTGCGCGTTTCTCGCGGAACATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                     <  SRR4302540.3380723/94‑1 (MQ=60)
                                                                      GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAGAATCAAT                     >  SRR4302540.2707350/1‑94 (MQ=60)
                                                                      GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                     >  SRR4302540.3770532/1‑94 (MQ=60)
                                                                      GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                     <  SRR4302540.178795/94‑1 (MQ=60)
                                                                       TGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATA                    >  SRR4302540.6881241/1‑94 (MQ=60)
                                                                       TGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATA                    >  SRR4302540.3517316/1‑94 (MQ=60)
                                                                       TGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATA                    <  SRR4302540.8144731/94‑1 (MQ=60)
                                                                        GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT                   <  SRR4302540.3901696/94‑1 (MQ=60)
                                                                        GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT                   >  SRR4302540.6087103/1‑94 (MQ=60)
                                                                        GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT                   <  SRR4302540.4840315/94‑1 (MQ=60)
                                                                        GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT                   <  SRR4302540.803759/94‑1 (MQ=60)
                                                                        GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT                   >  SRR4302540.183915/1‑94 (MQ=60)
                                                                         CTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATC                  <  SRR4302540.14498/94‑1 (MQ=60)
                                                                         CTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATC                  <  SRR4302540.9203614/94‑1 (MQ=60)
                                                                          TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG                 <  SRR4302540.1926666/94‑1 (MQ=60)
                                                                            CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCG               <  SRR4302540.2713423/94‑1 (MQ=60)
                                                                            CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCG               >  SRR4302540.2116801/1‑94 (MQ=60)
                                                                            CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCG               <  SRR4302540.4045443/94‑1 (MQ=60)
                                                                             TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT              <  SRR4302540.2799176/94‑1 (MQ=60)
                                                                             TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT              >  SRR4302540.7686780/1‑94 (MQ=60)
                                                                             TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT              >  SRR4302540.486161/1‑94 (MQ=60)
                                                                              GGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTG             >  SRR4302540.950746/1‑94 (MQ=60)
                                                                              GGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTG             <  SRR4302540.792017/94‑1 (MQ=60)
                                                                                ATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAC           <  SRR4302540.3481497/94‑1 (MQ=60)
                                                                                 TGGCGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACA          <  SRR4302540.4062401/94‑1 (MQ=60)
                                                                                  GACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGGAACTA         >  SRR4302540.1262802/1‑94 (MQ=60)
                                                                                   ACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAA        >  SRR4302540.5768497/1‑94 (MQ=60)
                                                                                    CGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAA       >  SRR4302540.7230633/1‑94 (MQ=60)
                                                                                     GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG      <  SRR4302540.6441612/94‑1 (MQ=60)
                                                                                     GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG      >  SRR4302540.1351558/1‑94 (MQ=60)
                                                                                     GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG      <  SRR4302540.5986969/94‑1 (MQ=60)
                                                                                     GAATGGTGCGCGTTTCACGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTAGATGGCCAGCATGAGATCCACAATCAATATCGCGTGACTAAAG      <  SRR4302540.9062178/94‑1 (MQ=60)
                                                                                      AATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGG     >  SRR4302540.7411930/1‑94 (MQ=60)
                                                                                      AATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGG     >  SRR4302540.2832727/1‑94 (MQ=60)
                                                                                       ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT    >  SRR4302540.4499681/1‑94 (MQ=60)
                                                                                       ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT    >  SRR4302540.6135292/1‑94 (MQ=60)
                                                                                       ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT    <  SRR4302540.6498487/94‑1 (MQ=60)
                                                                                       ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT    <  SRR4302540.8702773/94‑1 (MQ=60)
                                                                                       ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT    >  SRR4302540.6135294/1‑94 (MQ=60)
                                                                                       ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGG    >  SRR4302540.8837028/1‑94 (MQ=60)
                                                                                        TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG   >  SRR4302540.9158849/1‑94 (MQ=60)
                                                                                        TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG   <  SRR4302540.662398/94‑1 (MQ=60)
                                                                                        TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG   >  SRR4302540.6188102/1‑94 (MQ=60)
                                                                                         GGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGG  >  SRR4302540.7067719/1‑94 (MQ=60)
                                                                                         GGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGG  <  SRR4302540.1172220/94‑1 (MQ=60)
                                                                                             |                                                                                         
CCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGG  >  NC_000913/3980825‑3981007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑