Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
657,246 |
A→G |
intergenic (‑85/‑8) |
crcB ← / → ybeH |
hypothetical protein/hypothetical protein |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 657,246 | 0 | A | G | 100.0%
| 905.9
/ NA
| 281 | intergenic (‑85/‑8) | crcB/ybeH | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (131/150); total (131/150) |
Only 100 of 297 total aligned reads displayed.
TAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGAGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGG > NC_000913/657156‑657335
|
tAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACaggggg < 2:1411693/93‑1 (MQ=255)
tAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACaggggg < 2:2934650/93‑1 (MQ=255)
tAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACaggggg < 1:555095/93‑1 (MQ=255)
acacTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACTCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTg < 2:3358837/93‑1 (MQ=255)
acacTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTg > 1:4912929/1‑93 (MQ=255)
aaaaTCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGc < 1:2232430/93‑1 (MQ=255)
aaaTCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCt > 2:2265151/1‑93 (MQ=255)
aTCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTgg > 1:3887090/1‑93 (MQ=255)
aTCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTgg > 1:817442/1‑93 (MQ=255)
tCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGt < 1:1677002/93‑1 (MQ=255)
tCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGt < 2:2210825/93‑1 (MQ=255)
tGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGc > 1:1373235/1‑93 (MQ=255)
tGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGc < 1:2605455/93‑1 (MQ=255)
gCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGcc < 1:3590979/93‑1 (MQ=255)
cTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCg > 2:321845/1‑93 (MQ=255)
atttgatttgTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGcg > 1:2521747/1‑92 (MQ=255)
atttgatttgTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCa < 1:1172456/93‑1 (MQ=255)
tgatttgTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGa < 1:3685500/93‑1 (MQ=255)
atgtgTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACa < 1:3756487/90‑1 (MQ=255)
tttgTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAg < 1:905272/93‑1 (MQ=255)
tttgTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAg < 2:1309068/93‑1 (MQ=255)
tttgTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAg > 2:644639/1‑93 (MQ=255)
ttgTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGt < 2:3512805/93‑1 (MQ=255)
gTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGttt < 1:4156830/93‑1 (MQ=255)
gTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGttt < 1:4551421/93‑1 (MQ=255)
gTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGttt < 2:2324995/93‑1 (MQ=255)
gTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGttt > 2:5755652/1‑93 (MQ=255)
tATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTg > 2:2568410/1‑93 (MQ=255)
aTGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGc > 1:2447399/1‑93 (MQ=255)
aTGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGc < 2:602026/93‑1 (MQ=255)
tgagtgagAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCt < 2:1831756/93‑1 (MQ=255)
tGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCt > 2:1721484/1‑93 (MQ=255)
tGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCt < 1:3201181/93‑1 (MQ=255)
gAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGGAATGCTGGTTGCCGCAGGACAGTTTGCTg > 2:27782/1‑93 (MQ=255)
gAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTg > 1:1071510/1‑93 (MQ=255)
gTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGtt < 2:3104878/93‑1 (MQ=255)
tGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTa > 1:3330547/1‑93 (MQ=255)
aTAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACa < 1:994721/93‑1 (MQ=255)
aGTGTAACGCCGAATAATCGTCGCTGGCGAATTTTACGACTCTGACAGGGGGGGGCAATGCTGGTTGCCGCAGGACGGTTTGCTGTTACATCt > 1:4714803/1‑93 (MQ=255)
gtgtAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCtg > 2:2509548/1‑93 (MQ=255)
gtgtAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCtg < 2:23183/93‑1 (MQ=255)
gtgtAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCtg > 2:3790077/1‑93 (MQ=255)
tgtAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCtgt < 2:3418849/93‑1 (MQ=255)
tgtAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCtgt < 2:4469556/93‑1 (MQ=255)
gtAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACCTCtgtg < 2:5812487/93‑1 (MQ=255)
gtAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCtgtg > 1:1838426/1‑93 (MQ=255)
gCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGa > 1:4468416/1‑93 (MQ=255)
gCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGa > 1:4235074/1‑93 (MQ=255)
ccGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGaa > 1:74753/1‑93 (MQ=255)
cGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGaaa > 1:6228606/1‑93 (MQ=255)
cGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGaaa > 1:2075128/1‑93 (MQ=255)
cGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGaaa > 1:2031230/1‑93 (MQ=255)
gAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGaaaa > 1:2376273/1‑93 (MQ=255)
gAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGaaaa > 2:474241/1‑93 (MQ=255)
gAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGaaaa > 2:3604873/1‑93 (MQ=255)
gAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGaaaa < 2:3021396/93‑1 (MQ=255)
gAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTGGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGaaaa < 2:944857/93‑1 (MQ=255)
taatCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGaa > 1:1271104/1‑93 (MQ=255)
taatCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGaa > 2:2135135/1‑93 (MQ=255)
taatCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGaa < 2:4586708/93‑1 (MQ=255)
aatCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAAc < 2:5046378/93‑1 (MQ=255)
tcgtcgTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGc > 2:1127251/1‑93 (MQ=255)
tcgtcgTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGc < 1:4199648/93‑1 (MQ=255)
gtcgtTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTg > 1:2930030/1‑93 (MQ=255)
gtTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTgaga > 1:1603049/1‑93 (MQ=255)
gtTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTgaga > 1:1990910/1‑93 (MQ=255)
gtTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTgaga > 2:5466390/1‑93 (MQ=255)
ttGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAt > 2:3698336/1‑93 (MQ=255)
ttGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAt > 2:4132294/1‑93 (MQ=255)
ttGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAt > 1:2770826/1‑93 (MQ=255)
ttGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAt > 1:5667540/1‑93 (MQ=255)
ttGGCGAATTTTACGACTCTGACAGGGGGGGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAt > 1:5832523/1‑93 (MQ=255)
tGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAtg > 1:6047629/1‑92 (MQ=255)
cgcaTTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTtgt < 2:1621679/90‑1 (MQ=255)
cGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTtgt < 1:4248733/93‑1 (MQ=255)
cGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTtgt < 2:1917779/93‑1 (MQ=255)
gAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTtgtg < 1:3424703/93‑1 (MQ=255)
aaTTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGc > 1:2310483/1‑93 (MQ=255)
aaTTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGc > 2:306160/1‑93 (MQ=255)
aaTTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGc > 1:2134265/1‑93 (MQ=255)
aaTTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGc > 2:5254832/1‑93 (MQ=255)
aTTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGcc > 2:5921432/1‑93 (MQ=255)
ttttACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCt < 1:3041189/93‑1 (MQ=255)
ttttACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCt < 2:4300773/93‑1 (MQ=255)
tttACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTc < 1:4896894/93‑1 (MQ=255)
tttACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTc > 2:3655665/1‑93 (MQ=255)
tttACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTc < 1:5118968/93‑1 (MQ=255)
ttACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCg > 2:3969352/1‑93 (MQ=255)
tACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGt < 2:4898488/93‑1 (MQ=255)
aCGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGtt < 1:5376462/93‑1 (MQ=255)
gACTGTGACAGGGGGTGGCAATGCTGGTTGCCTCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGa < 2:5628364/93‑1 (MQ=255)
ctctGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATg < 1:1420287/93‑1 (MQ=255)
tctGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATgg > 1:5020429/1‑93 (MQ=255)
tctGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATgg > 2:6233849/1‑93 (MQ=255)
ctGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGGGGGAGAAGAACGCTGAGATTTGTGCCTCGTTTATggg > 1:1104489/1‑92 (MQ=255)
aCAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCa < 1:2564010/93‑1 (MQ=255)
cAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAg < 2:3862366/93‑1 (MQ=255)
cAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAg > 1:5973864/1‑93 (MQ=255)
cAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAg < 1:3800517/93‑1 (MQ=255)
agggggTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAgg > 2:79192/1‑93 (MQ=255)
|
TAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGAGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGG > NC_000913/657156‑657335
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGAGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGG > NC_000913/657154‑657338
|
TGTAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGG > SRR4302533.5123348/1‑94 (MQ=60)
GTAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGG > SRR4302533.3778039/1‑94 (MQ=60)
GTAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGG > SRR4302533.3865188/1‑94 (MQ=60)
TAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGT > SRR4302533.5762143/1‑94 (MQ=60)
TAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGT < SRR4302533.2976861/94‑1 (MQ=60)
TAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGT < SRR4302533.558386/94‑1 (MQ=60)
AACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTG > SRR4302533.4942687/1‑94 (MQ=60)
AACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTG > SRR4302533.4942688/1‑94 (MQ=60)
AACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTG > SRR4302533.5898643/1‑94 (MQ=60)
ACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGG < SRR4302533.1639621/94‑1 (MQ=60)
ACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCA > SRR4302533.5395216/1‑94 (MQ=60)
CTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAA > SRR4302533.5619566/1‑94 (MQ=60)
TGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAAT > SRR4302533.5069877/1‑94 (MQ=60)
GCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATG < SRR4302533.4965480/94‑1 (MQ=60)
AAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCT < SRR4302533.1604301/94‑1 (MQ=60)
AAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCT < SRR4302533.2136855/94‑1 (MQ=60)
AAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCT < SRR4302533.2246206/94‑1 (MQ=60)
AAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTG < SRR4302533.2701875/94‑1 (MQ=60)
AATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGG < SRR4302533.4950758/94‑1 (MQ=60)
AATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGG > SRR4302533.822231/1‑94 (MQ=60)
AATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGG > SRR4302533.3910805/1‑94 (MQ=60)
AATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGG > SRR4302533.6020665/1‑94 (MQ=60)
AATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGG < SRR4302533.542431/94‑1 (MQ=60)
ATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGT < SRR4302533.1295332/94‑1 (MQ=60)
ATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGT < SRR4302533.6133427/94‑1 (MQ=60)
ATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGT > SRR4302533.36109/1‑94 (MQ=60)
ATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGT > SRR4302533.73333/1‑94 (MQ=60)
TCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTT < SRR4302533.1687156/94‑1 (MQ=60)
TCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTT < SRR4302533.6078177/94‑1 (MQ=60)
TCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTT < SRR4302533.1308121/94‑1 (MQ=60)
CTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGC > SRR4302533.3059807/1‑94 (MQ=60)
CTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGC > SRR4302533.1381497/1‑94 (MQ=60)
TGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGTGGGTGGCAATGCTGGTTGCC < SRR4302533.1403181/94‑1 (MQ=60)
TGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCC > SRR4302533.2016552/1‑94 (MQ=60)
TGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCC < SRR4302533.2243457/94‑1 (MQ=60)
TGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCC < SRR4302533.2621460/94‑1 (MQ=60)
TGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCC < SRR4302533.2300318/94‑1 (MQ=60)
TGCTATTTGATGTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCC < SRR4302533.3114162/94‑1 (MQ=60)
GCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCG < SRR4302533.3613085/94‑1 (MQ=60)
TATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCG > SRR4302533.2537285/1‑94 (MQ=60)
TATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCA < SRR4302533.1135557/94‑1 (MQ=60)
ATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAG > SRR4302533.3881708/1‑94 (MQ=60)
ATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAG < SRR4302533.1179494/94‑1 (MQ=60)
TTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGG < SRR4302533.947965/94‑1 (MQ=60)
TTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGA > SRR4302533.5927331/1‑94 (MQ=60)
TGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGAC > SRR4302533.4604970/1‑94 (MQ=60)
TGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGAC < SRR4302533.3708151/94‑1 (MQ=60)
ATGTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAG < SRR4302533.3779513/94‑1 (MQ=60)
TTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGT < SRR4302533.910578/94‑1 (MQ=60)
TTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTT < SRR4302533.5140645/94‑1 (MQ=60)
TTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTT < SRR4302533.4055582/94‑1 (MQ=60)
GTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTG < SRR4302533.4579022/94‑1 (MQ=60)
GTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTG < SRR4302533.4182018/94‑1 (MQ=60)
TATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGC > SRR4302533.2462501/1‑94 (MQ=60)
TATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGC < SRR4302533.1151002/94‑1 (MQ=60)
ATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCT < SRR4302533.1794153/94‑1 (MQ=60)
TGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTG > SRR4302533.1077824/1‑94 (MQ=60)
TGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTG < SRR4302533.4198541/94‑1 (MQ=60)
TGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTG > SRR4302533.3364471/1‑94 (MQ=60)
TGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTG < SRR4302533.3220879/94‑1 (MQ=60)
TGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTG > SRR4302533.2355939/1‑94 (MQ=60)
GAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGT > SRR4302533.1628885/1‑94 (MQ=60)
AGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTT < SRR4302533.2847986/94‑1 (MQ=60)
AGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTT < SRR4302533.2848155/94‑1 (MQ=60)
GTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTA > SRR4302533.4939662/1‑94 (MQ=60)
GTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTA > SRR4302533.3351134/1‑94 (MQ=60)
TGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTAC > SRR4302533.2479370/1‑94 (MQ=60)
ATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACAT < SRR4302533.1000533/94‑1 (MQ=60)
TAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATC < SRR4302533.94235/94‑1 (MQ=60)
AAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCT < SRR4302533.4394941/94‑1 (MQ=60)
AAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCT < SRR4302533.6110833/94‑1 (MQ=60)
AAGTGTAACGCCGAATAATCGTCGCTGGCGAATTTTACGACTCTGACAGGGGGGGGCAATGCTGGTTGCCGCAGGACGGTTTGCTGTTACATCT > SRR4302533.4743377/1‑94 (MQ=60)
AGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTG < SRR4302533.2684268/94‑1 (MQ=60)
GTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGT > SRR4302533.576290/1‑94 (MQ=60)
GTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGGGGCGATGCTGGTTGCCGCAGGAGAGTTTGCTGTTACCTCTGT > SRR4302533.1102488/1‑94 (MQ=60)
TGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTG > SRR4302533.1849637/1‑94 (MQ=60)
TAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTG < SRR4302533.3937056/94‑1 (MQ=60)
CGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGCCAGTTTGCTGTTACATCTGTGTGGGA > SRR4302533.3342704/1‑94 (MQ=60)
CGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGA > SRR4302533.4260662/1‑94 (MQ=60)
CGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGA > SRR4302533.4495443/1‑94 (MQ=60)
GCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAA > SRR4302533.75239/1‑94 (MQ=60)
CCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAA > SRR4302533.2087904/1‑94 (MQ=60)
CCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAA > SRR4302533.2043767/1‑94 (MQ=60)
CCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAA > SRR4302533.6265917/1‑94 (MQ=60)
CGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAA > SRR4302533.4242517/1‑94 (MQ=60)
CGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAA > SRR4302533.2390976/1‑94 (MQ=60)
GAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAG < SRR4302533.1822186/94‑1 (MQ=60)
AATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGA < SRR4302533.3961473/94‑1 (MQ=60)
AATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGA > SRR4302533.4268546/1‑94 (MQ=60)
ATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAA < SRR4302533.5376917/94‑1 (MQ=60)
ATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAA > SRR4302533.1278708/1‑94 (MQ=60)
TTATCGTCGTTGGCCAATTTTACGACTCTGACAGGGGGTGGCAATGCTTGTTCCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAAC < SRR4302533.5534599/94‑1 (MQ=60)
TAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAAC < SRR4302533.2053994/94‑1 (MQ=60)
TAATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAAC < SRR4302533.4841538/94‑1 (MQ=60)
AATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACG > SRR4302533.2043904/1‑94 (MQ=60)
AATCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACG < SRR4302533.1880806/94‑1 (MQ=60)
TCGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCT < SRR4302533.4225062/94‑1 (MQ=60)
CGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTG < SRR4302533.2542994/94‑1 (MQ=60)
CGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTG < SRR4302533.761777/94‑1 (MQ=60)
CGTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTG > SRR4302533.2947952/1‑94 (MQ=60)
GTCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGA < SRR4302533.1396167/94‑1 (MQ=60)
TCGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAG < SRR4302533.1912094/94‑1 (MQ=60)
CGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGA < SRR4302533.4236433/94‑1 (MQ=60)
CGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGA > SRR4302533.381143/1‑94 (MQ=60)
CGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGA > SRR4302533.1612755/1‑94 (MQ=60)
CGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGA > SRR4302533.1461233/1‑94 (MQ=60)
CGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGA < SRR4302533.2023851/94‑1 (MQ=60)
CGTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGA > SRR4302533.2003106/1‑94 (MQ=60)
GTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAT > SRR4302533.4532062/1‑94 (MQ=60)
GTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAT > SRR4302533.2787826/1‑94 (MQ=60)
GTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAT > SRR4302533.5701774/1‑94 (MQ=60)
GTTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAT > SRR4302533.1202301/1‑94 (MQ=60)
GTTGGCGAATTTTACGACTCTGACAGGGGGGGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGAT > SRR4302533.5867774/1‑94 (MQ=60)
TTGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATG > SRR4302533.6084275/1‑94 (MQ=60)
TGGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTT > SRR4302533.786646/1‑94 (MQ=60)
GGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTG < SRR4302533.3008225/94‑1 (MQ=60)
GGCGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTG < SRR4302533.3260536/94‑1 (MQ=60)
CGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTG > SRR4302533.5650631/1‑94 (MQ=60)
CGAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTG < SRR4302533.4274375/94‑1 (MQ=60)
CGAATTTTACGACTCTGACAGGGGGGGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTG > SRR4302533.837929/1‑94 (MQ=60)
GAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGC > SRR4302533.2147426/1‑94 (MQ=60)
GAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGC > SRR4302533.2324797/1‑94 (MQ=60)
GAATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGC < SRR4302533.3445861/94‑1 (MQ=60)
GAATTTTACGACTCTGACAGGGGGGGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGC > SRR4302533.4605081/1‑94 (MQ=60)
ATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCT > SRR4302533.889927/1‑94 (MQ=60)
ATTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCT < SRR4302533.4203174/94‑1 (MQ=60)
TTTTACGACTCTGACAGGGGGTGGCAATTCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTC < SRR4302533.3464643/94‑1 (MQ=60)
TTTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTC < SRR4302533.3059803/94‑1 (MQ=60)
TTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCG < SRR4302533.4840713/94‑1 (MQ=60)
TTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCG < SRR4302533.4926564/94‑1 (MQ=60)
TTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCG < SRR4302533.5149897/94‑1 (MQ=60)
TTTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCG < SRR4302533.2579436/94‑1 (MQ=60)
TTACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGT > SRR4302533.3652737/1‑94 (MQ=60)
TACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTT < SRR4302533.6311437/94‑1 (MQ=60)
TACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTT < SRR4302533.3639783/94‑1 (MQ=60)
ACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTG > SRR4302533.3788605/1‑94 (MQ=60)
ACGACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTG < SRR4302533.5408774/94‑1 (MQ=60)
GACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGAT < SRR4302533.2139661/94‑1 (MQ=60)
GACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGAT > SRR4302533.2479547/1‑94 (MQ=60)
ACTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATG < SRR4302533.2312269/94‑1 (MQ=60)
CTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGG < SRR4302533.1428879/94‑1 (MQ=60)
CTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGG < SRR4302533.3427823/94‑1 (MQ=60)
CTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGG > SRR4302533.5050835/1‑94 (MQ=60)
CTCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGG > SRR4302533.1220528/1‑94 (MQ=60)
TCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGC > SRR4302533.4290150/1‑94 (MQ=60)
TCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGC > SRR4302533.2345534/1‑94 (MQ=60)
TCTGACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGGGGGAGAAGAACGCTGAGATTTGTGCCTCGTTTATGGG > SRR4302533.1111032/1‑94 (MQ=60)
GACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCA > SRR4302533.4528035/1‑94 (MQ=60)
GACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGGTTGCTGGTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCA > SRR4302533.3751255/1‑94 (MQ=60)
ACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAG > SRR4302533.6010026/1‑94 (MQ=60)
ACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAG < SRR4302533.5492179/94‑1 (MQ=60)
ACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAG < SRR4302533.2579790/94‑1 (MQ=60)
ACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAG < SRR4302533.2581991/94‑1 (MQ=60)
ACAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAG < SRR4302533.2608919/94‑1 (MQ=60)
CAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGG > SRR4302533.2457791/1‑94 (MQ=60)
CAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGG < SRR4302533.3823777/94‑1 (MQ=60)
CAGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGG > SRR4302533.2211167/1‑94 (MQ=60)
AGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGC < SRR4302533.2391221/94‑1 (MQ=60)
AGGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGC > SRR4302533.4781475/1‑94 (MQ=60)
GGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCG > SRR4302533.6325333/1‑94 (MQ=60)
GGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCG < SRR4302533.837310/94‑1 (MQ=60)
GGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCG > SRR4302533.4609129/1‑94 (MQ=60)
GGGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCG < SRR4302533.3674899/94‑1 (MQ=60)
GGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGG < SRR4302533.5692624/94‑1 (MQ=60)
GGGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGG > SRR4302533.5232468/1‑94 (MQ=60)
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TGTAACACTGCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGAGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGG > NC_000913/657154‑657338
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |