Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
707,634 |
A→G |
A26A (GCA→GCG) |
ybfM → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 707,634 | 0 | A | G | 100.0%
| 724.4
/ NA
| 223 | A26A (GCA→GCG) | ybfM | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (108/115); total (108/115) |
Only 100 of 227 total aligned reads displayed.
AGAGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCAATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAGA > NC_000913/707544‑707723
|
agagGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGAt > 1:680258/1‑93 (MQ=255)
agagGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGAt > 2:2246782/1‑93 (MQ=255)
agGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGc < 1:2779772/93‑1 (MQ=255)
ggATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGcc < 1:4866564/93‑1 (MQ=255)
gATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCg > 1:5544793/1‑93 (MQ=255)
ttAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGa > 1:5608753/1‑93 (MQ=255)
tAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAg < 2:1963337/93‑1 (MQ=255)
aCCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGc < 1:909334/93‑1 (MQ=255)
aCCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGc < 2:2568052/93‑1 (MQ=255)
cccATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCt > 1:3680819/1‑93 (MQ=255)
cccATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCt < 2:3267509/93‑1 (MQ=255)
cATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTcg > 1:1023136/1‑93 (MQ=255)
cATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTcg > 2:6029185/1‑93 (MQ=255)
cATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTcg < 1:4206693/93‑1 (MQ=255)
cATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTcg < 2:512773/93‑1 (MQ=255)
cATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTcg < 2:4257283/93‑1 (MQ=255)
cATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTcg > 2:3403115/1‑93 (MQ=255)
tGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTcgcg > 2:5928987/1‑93 (MQ=255)
gCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCgcgc < 1:5969193/93‑1 (MQ=255)
gTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCg > 1:5338344/1‑93 (MQ=255)
tACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGa < 2:6034669/93‑1 (MQ=255)
aCGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGaa < 1:1746845/93‑1 (MQ=255)
aCGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGaa > 1:100279/1‑93 (MQ=255)
gTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAgg < 2:5820343/93‑1 (MQ=255)
aGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTc < 1:1880860/93‑1 (MQ=255)
gTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCa < 2:2729542/93‑1 (MQ=255)
tGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCAt < 2:845297/93‑1 (MQ=255)
ggCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATc < 1:4572500/93‑1 (MQ=255)
ggCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATc > 1:5894708/1‑93 (MQ=255)
cAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGGTTCATcga > 1:1105660/1‑93 (MQ=255)
cAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATcga < 2:53614/93‑1 (MQ=255)
aaaCGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATcgac < 2:3650424/93‑1 (MQ=255)
aaCGTAGTACGCTGGCGCTGGCTATCGCCGTTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATcgacg < 2:3168554/93‑1 (MQ=255)
aaCGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATcgacg > 2:6181504/1‑93 (MQ=255)
aaCGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATcgacg > 1:2652784/1‑93 (MQ=255)
aaCGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTAGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATcgacg > 1:4089059/1‑93 (MQ=255)
aCGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATcgacga < 2:703994/93‑1 (MQ=255)
tagtaCGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTTCTCGACGATTc > 2:1851933/1‑93 (MQ=255)
tagtaCGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTc > 2:3204347/1‑93 (MQ=255)
gtaCGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCaa < 2:1970025/93‑1 (MQ=255)
gtaCGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCaa > 2:3598805/1‑93 (MQ=255)
taCGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAAc < 1:726330/93‑1 (MQ=255)
aCGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAAcc < 2:4100667/93‑1 (MQ=255)
aCGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAAcc < 2:2080437/93‑1 (MQ=255)
cgctggcgctggCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCt < 2:4712080/93‑1 (MQ=255)
cgctggcgctggCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCt < 1:2119465/93‑1 (MQ=255)
ctggcgctggcTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCACCGAAGGATTCATCGACGATTCAACCTTa > 1:6080648/1‑93 (MQ=255)
tggcgctggcTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTaa > 1:526642/1‑93 (MQ=255)
ggcgctggcTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAAc > 2:75373/1‑93 (MQ=255)
gcgctggcTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAAcc < 2:2935557/93‑1 (MQ=255)
gcgctggcTATCGCCGGTGTTACAGCAATGTCGGGCTTGATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAAcc < 1:4986974/93‑1 (MQ=255)
ctggcTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACcggc < 2:4686712/93‑1 (MQ=255)
ctggcTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACcggc < 1:1682088/93‑1 (MQ=255)
gcTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGt > 2:1588887/1‑93 (MQ=255)
tATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTAt < 1:5778584/93‑1 (MQ=255)
tATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTAt > 1:2519297/1‑93 (MQ=255)
tCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCt < 2:2062839/93‑1 (MQ=255)
cGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTa < 2:4798625/93‑1 (MQ=255)
cGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTa < 1:3619754/93‑1 (MQ=255)
gCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTAt > 2:2294028/1‑93 (MQ=255)
gCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTAt > 1:663830/1‑93 (MQ=255)
ccGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTAtt > 2:3988157/1‑93 (MQ=255)
ccGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTAtt < 2:1131563/93‑1 (MQ=255)
cGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTa > 2:3864170/1‑93 (MQ=255)
ggTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTAc > 1:5240136/1‑93 (MQ=255)
gtgtTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACt < 1:4535187/93‑1 (MQ=255)
gtTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTgg < 2:5001022/93‑1 (MQ=255)
tACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCa > 2:2362748/1‑93 (MQ=255)
tACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCa < 1:5176143/93‑1 (MQ=255)
cAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGc > 1:4013279/1‑93 (MQ=255)
aGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGCCGCTTCAACCTTAACCTGCCGGATCTATTACTGGCAGCg > 2:3021290/1‑93 (MQ=255)
aGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCg > 2:4473385/1‑93 (MQ=255)
aGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCg < 2:1471585/93‑1 (MQ=255)
aGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCg < 2:4770269/93‑1 (MQ=255)
cAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTg > 1:1165890/1‑93 (MQ=255)
aaTGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGa > 1:3350901/1‑93 (MQ=255)
aTGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGaa < 1:2246782/93‑1 (MQ=255)
tGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAAc > 2:3657004/1‑93 (MQ=255)
tGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAAc < 2:1704945/93‑1 (MQ=255)
tCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAAcgc < 2:5268157/93‑1 (MQ=255)
tCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAAcgc > 2:4602636/1‑93 (MQ=255)
tCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAAcgc < 2:1253833/93‑1 (MQ=255)
cGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTTGCAGCGGGAAcgcg > 2:2820708/1‑93 (MQ=255)
cGGGCTTGATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAAcgcg < 1:5055788/93‑1 (MQ=255)
gggCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGa < 1:5294004/93‑1 (MQ=255)
ggCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCCTCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGGACGCGAc > 2:5582773/1‑93 (MQ=255)
ggCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGAc > 2:857923/1‑93 (MQ=255)
ggCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGAc < 2:2161812/93‑1 (MQ=255)
ggCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGAc > 1:1329918/1‑93 (MQ=255)
gCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGAcc < 1:4594946/93‑1 (MQ=255)
tttATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGt > 2:1756313/1‑93 (MQ=255)
agggCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTaaa < 1:5697652/91‑1 (MQ=255)
aTGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTaaa < 2:3346507/93‑1 (MQ=255)
aTGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTaaa < 2:3326388/93‑1 (MQ=255)
aTGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTaaa < 1:3934064/93‑1 (MQ=255)
aTGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTaaa < 1:2968009/93‑1 (MQ=255)
aTGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTaaa > 1:2377850/1‑93 (MQ=255)
aTGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTaaa < 1:2311282/93‑1 (MQ=255)
tGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAg < 2:3482478/93‑1 (MQ=255)
ggCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAGa > 2:4336701/1‑93 (MQ=255)
|
AGAGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCAATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAGA > NC_000913/707544‑707723
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGAGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCAATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAGATGTT > NC_000913/707541‑707727
|
CAAAGAGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCG > SRR4302533.803868/1‑94 (MQ=60)
AAAGAGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGA > SRR4302533.3797408/1‑94 (MQ=60)
AAAGAGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGA > SRR4302533.4311090/1‑94 (MQ=60)
AAGAGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGAT > SRR4302533.684282/1‑94 (MQ=60)
AGAGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATG < SRR4302533.3140530/94‑1 (MQ=60)
AGAGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATG < SRR4302533.4746133/94‑1 (MQ=60)
AGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCC < SRR4302533.2796847/94‑1 (MQ=60)
AGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCC < SRR4302533.1939709/94‑1 (MQ=60)
GGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCG < SRR4302533.4896056/94‑1 (MQ=60)
GGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCG > SRR4302533.5578283/1‑94 (MQ=60)
ATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGA > SRR4302533.5642649/1‑94 (MQ=60)
TAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGG < SRR4302533.1776041/94‑1 (MQ=60)
ACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCT > SRR4302533.3703438/1‑94 (MQ=60)
ACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCT < SRR4302533.914668/94‑1 (MQ=60)
CCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCG > SRR4302533.1029149/1‑94 (MQ=60)
CATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGC < SRR4302533.4232140/94‑1 (MQ=60)
CATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGC > SRR4302533.6131800/1‑94 (MQ=60)
ATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCG > SRR4302533.4741950/1‑94 (MQ=60)
TGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGC > SRR4302533.5405013/1‑94 (MQ=60)
GCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCC < SRR4302533.1719733/94‑1 (MQ=60)
GCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCC < SRR4302533.6005329/94‑1 (MQ=60)
CGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCG > SRR4302533.5370353/1‑94 (MQ=60)
CGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCG > SRR4302533.1019084/1‑94 (MQ=60)
CGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCG < SRR4302533.1247698/94‑1 (MQ=60)
GTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGA > SRR4302533.415890/1‑94 (MQ=60)
TACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAA > SRR4302533.100905/1‑94 (MQ=60)
ACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAG < SRR4302533.4611419/94‑1 (MQ=60)
ACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAG < SRR4302533.1757472/94‑1 (MQ=60)
CGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGG > SRR4302533.3972678/1‑94 (MQ=60)
GTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGA > SRR4302533.5815460/1‑94 (MQ=60)
AGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCA < SRR4302533.1892316/94‑1 (MQ=60)
AGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCA > SRR4302533.672670/1‑94 (MQ=60)
GTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCAT < SRR4302533.5251102/94‑1 (MQ=60)
TGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATC > SRR4302533.5930309/1‑94 (MQ=60)
TGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATC < SRR4302533.2156950/94‑1 (MQ=60)
GGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTTATCG > SRR4302533.1811616/1‑94 (MQ=60)
GGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCG < SRR4302533.4600210/94‑1 (MQ=60)
GCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGGTTCATCGA > SRR4302533.1112215/1‑94 (MQ=60)
AAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACG > SRR4302533.2669082/1‑94 (MQ=60)
AAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACG > SRR4302533.5450335/1‑94 (MQ=60)
AAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTAGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACG > SRR4302533.4113954/1‑94 (MQ=60)
ACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGAT < SRR4302533.1138238/94‑1 (MQ=60)
AGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGCAGGATTCATCGACGATTCAA > SRR4302533.5216055/1‑94 (MQ=60)
TACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACC < SRR4302533.730620/94‑1 (MQ=60)
CGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTT < SRR4302533.2132539/94‑1 (MQ=60)
GCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTA < SRR4302533.2652564/94‑1 (MQ=60)
GCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTA > SRR4302533.432617/1‑94 (MQ=60)
GCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCACCGAAGGATTCATCGACGATTCAACCTTA > SRR4302533.6117420/1‑94 (MQ=60)
CTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAA > SRR4302533.529763/1‑94 (MQ=60)
GGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACC < SRR4302533.2465401/94‑1 (MQ=60)
GCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCG < SRR4302533.5819258/94‑1 (MQ=60)
GCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTGATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCG < SRR4302533.5017211/94‑1 (MQ=60)
CGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGG < SRR4302533.2388047/94‑1 (MQ=60)
CTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCG < SRR4302533.1692276/94‑1 (MQ=60)
CTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCG < SRR4302533.5666630/94‑1 (MQ=60)
CTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTAT > SRR4302533.2534819/1‑94 (MQ=60)
TATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATC < SRR4302533.5813489/94‑1 (MQ=60)
TATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATC > SRR4302533.2892875/1‑94 (MQ=60)
ATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCT > SRR4302533.5340062/1‑94 (MQ=60)
ATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCT < SRR4302533.5106672/94‑1 (MQ=60)
CGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTAT < SRR4302533.3642025/94‑1 (MQ=60)
CGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTAT > SRR4302533.667748/1‑94 (MQ=60)
CGCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTAT < SRR4302533.5007724/94‑1 (MQ=60)
GCCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTTAACCTTAACCGGCGGGATCTATT > SRR4302533.5587330/1‑94 (MQ=60)
GCCGGTGTTACAGCAATGTCGGGCTTTATGGAGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATT > SRR4302533.952542/1‑94 (MQ=60)
CCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTA < SRR4302533.129872/94‑1 (MQ=60)
CCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTA > SRR4302533.4598238/1‑94 (MQ=60)
CCGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTA < SRR4302533.5287608/94‑1 (MQ=60)
CGGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTAC > SRR4302533.5271640/1‑94 (MQ=60)
GGTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCACCCTTAACCCGCGGCATCTATTACT > SRR4302533.4086684/1‑94 (MQ=60)
GTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTG < SRR4302533.4562647/94‑1 (MQ=60)
GTGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTG < SRR4302533.2860562/94‑1 (MQ=60)
TGTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGG > SRR4302533.3573974/1‑94 (MQ=60)
GTTACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGC < SRR4302533.1058656/94‑1 (MQ=60)
TACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAG > SRR4302533.5993997/1‑94 (MQ=60)
TACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAG < SRR4302533.5207407/94‑1 (MQ=60)
TACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAG < SRR4302533.4289889/94‑1 (MQ=60)
ACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGC < SRR4302533.386638/94‑1 (MQ=60)
ACAGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGC > SRR4302533.4037714/1‑94 (MQ=60)
AGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGT < SRR4302533.718873/94‑1 (MQ=60)
AGCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGGATCTATTACTGGCAGCGT > SRR4302533.2457993/1‑94 (MQ=60)
GCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTG > SRR4302533.1172883/1‑94 (MQ=60)
GCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTG < SRR4302533.768982/94‑1 (MQ=60)
GCAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTG < SRR4302533.150119/94‑1 (MQ=60)
CAATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGA > SRR4302533.3371600/1‑94 (MQ=60)
AATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAA < SRR4302533.2040748/94‑1 (MQ=60)
ATGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAAC < SRR4302533.2260666/94‑1 (MQ=60)
TGTCGGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACG > SRR4302533.2738580/1‑94 (MQ=60)
CGGGCTTGATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGA < SRR4302533.5086348/94‑1 (MQ=60)
GGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGAC > SRR4302533.1337896/1‑94 (MQ=60)
GGGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGAC < SRR4302533.5325693/94‑1 (MQ=60)
GGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACC < SRR4302533.5769239/94‑1 (MQ=60)
GGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACC > SRR4302533.3645574/1‑94 (MQ=60)
GGCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACC > SRR4302533.6079305/1‑94 (MQ=60)
GCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCG < SRR4302533.229042/94‑1 (MQ=60)
GCTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCG < SRR4302533.4622780/94‑1 (MQ=60)
CTTTATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGT > SRR4302533.5034008/1‑94 (MQ=60)
TATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAA < SRR4302533.3728427/94‑1 (MQ=60)
TATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAA > SRR4302533.2392562/1‑94 (MQ=60)
ATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAG < SRR4302533.5308355/94‑1 (MQ=60)
ATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAG < SRR4302533.2325601/94‑1 (MQ=60)
ATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAG > SRR4302533.636143/1‑94 (MQ=60)
ATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAG < SRR4302533.2986153/94‑1 (MQ=60)
ATGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAG < SRR4302533.3958076/94‑1 (MQ=60)
AGGGCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAG < SRR4302533.5732069/94‑1 (MQ=60)
GCGATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAGATG < SRR4302533.5128904/94‑1 (MQ=60)
GATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAGATGTT > SRR4302533.4943278/1‑94 (MQ=60)
GATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAGATGTT < SRR4302533.1448822/94‑1 (MQ=60)
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CAAAGAGGATTAACCCATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCAATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAGATGTT > NC_000913/707541‑707727
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
