Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
744,690 |
T→C |
R101R (CGT→CGC) |
ybgL → |
putative lactam utilization protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 744,690 | 0 | T | C | 100.0%
| 690.1
/ NA
| 212 | R101R (CGT→CGC) | ybgL | putative lactam utilization protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (85/127); total (85/127) |
Only 100 of 225 total aligned reads displayed.
GCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGA > NC_000913/744600‑744779
|
gCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCa < 2:3845431/93‑1 (MQ=255)
gCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCa > 1:2971822/1‑93 (MQ=255)
aGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATg > 1:2015476/1‑93 (MQ=255)
gCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGt > 1:4835943/1‑93 (MQ=255)
tGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCa > 2:4504390/1‑93 (MQ=255)
tGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCa > 1:5270853/1‑93 (MQ=255)
gccgccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCaa > 2:2260452/1‑93 (MQ=255)
gccgccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCaa < 2:4214377/93‑1 (MQ=255)
gccgccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCaa > 1:5109052/1‑93 (MQ=255)
ccgccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCaaa < 2:1708963/93‑1 (MQ=255)
ccgccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCaaa < 1:4355777/93‑1 (MQ=255)
ccgccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCaaa < 1:6228541/93‑1 (MQ=255)
gccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCACAcc > 1:5575688/1‑93 (MQ=255)
gccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAAcc < 1:2380937/93‑1 (MQ=255)
gccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAAcc > 1:5822846/1‑93 (MQ=255)
gccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAAcc < 1:5849107/93‑1 (MQ=255)
ccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCg > 1:3716417/1‑93 (MQ=255)
cAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGc > 1:730370/1‑93 (MQ=255)
cAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGc < 2:325604/93‑1 (MQ=255)
aGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCGCGTGCGCAAGGCGGCGCAATGCGCCATGTCAAACCGCa > 2:4200305/1‑93 (MQ=255)
aGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCa < 2:4440730/93‑1 (MQ=255)
aGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCa > 1:3800383/1‑93 (MQ=255)
gAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCAc < 1:4004047/93‑1 (MQ=255)
aaaCCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACg < 1:2564178/93‑1 (MQ=255)
aCCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGc > 1:4881979/1‑93 (MQ=255)
aCCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGc < 2:477216/93‑1 (MQ=255)
ccGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCa > 1:4183140/1‑93 (MQ=255)
cGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAt > 1:837280/1‑93 (MQ=255)
gTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAtg < 2:3905579/93‑1 (MQ=255)
gTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAtg > 2:187054/1‑93 (MQ=255)
gTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAtg > 1:4842867/1‑93 (MQ=255)
gTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAtg > 2:1400545/1‑93 (MQ=255)
tACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAtgttc < 1:5941785/93‑2 (MQ=255)
cGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTa < 2:1906498/93‑1 (MQ=255)
cGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTa < 1:2896401/93‑1 (MQ=255)
cGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTa < 2:3216119/93‑1 (MQ=255)
cGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTa > 1:819008/1‑93 (MQ=255)
cccAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACa > 2:2063299/1‑93 (MQ=255)
cccAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACa > 2:2973326/1‑93 (MQ=255)
cAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAc < 2:282017/93‑1 (MQ=255)
cAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAc > 2:1630227/1‑93 (MQ=255)
cAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAc < 1:864954/93‑1 (MQ=255)
cAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAc > 1:4962775/1‑93 (MQ=255)
cAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAc < 1:2710044/93‑1 (MQ=255)
gACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCa < 1:4920845/93‑1 (MQ=255)
gACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCa > 2:4736707/1‑93 (MQ=255)
aCGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAg < 1:2002086/93‑1 (MQ=255)
aCGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAg < 1:4306522/93‑1 (MQ=255)
gCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAggc < 1:3183356/93‑1 (MQ=255)
cTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAggcg > 1:744765/1‑93 (MQ=255)
tGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAggcgg < 1:5970203/93‑1 (MQ=255)
gTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAggcggc < 2:5394866/93‑1 (MQ=255)
gTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAggcggc < 1:5373094/93‑1 (MQ=255)
gTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAggcggc > 2:2446508/1‑93 (MQ=255)
aTCACATTGGCGCGCTGGAAACGATTGCCCATGCACAAGGCGGCGTAATGCGCCATGTCAAACAGCCCGGCCTATAGTACAACCAGGCGGCGa < 1:6305963/93‑1 (MQ=255)
aTCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGa > 2:2958897/1‑93 (MQ=255)
tCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGaa > 2:4020916/1‑93 (MQ=255)
aaaTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaag < 2:550359/93‑1 (MQ=255)
aTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaagaa < 2:1609235/93‑1 (MQ=255)
ttGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaagaag > 1:2283931/1‑93 (MQ=255)
gcgcgcTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGcac < 1:2854736/93‑1 (MQ=255)
cgcgcTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGcaca > 1:5754515/1‑93 (MQ=255)
cgcTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAAc < 2:3318517/93‑1 (MQ=255)
cgcTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAAc < 1:1886859/93‑1 (MQ=255)
cgcTGGCAACGATTGCCAGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAAc < 1:3763585/93‑1 (MQ=255)
gcTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACt > 2:5175977/1‑93 (MQ=255)
cTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTg < 2:1720470/93‑1 (MQ=255)
cTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTg < 2:1850690/93‑1 (MQ=255)
ggCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGc < 2:2580964/93‑1 (MQ=255)
gCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCa < 1:6094934/93‑1 (MQ=255)
gCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCa < 2:4996560/93‑1 (MQ=255)
gCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCa < 2:3700628/93‑1 (MQ=255)
cAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAg > 1:322948/1‑93 (MQ=255)
aaCGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGa < 2:4886743/93‑1 (MQ=255)
aCGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGAc < 1:3279312/93‑1 (MQ=255)
aCGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGAc > 1:2435811/1‑93 (MQ=255)
cGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACg < 1:632907/93‑1 (MQ=255)
cGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACg > 2:694866/1‑93 (MQ=255)
gCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATc > 1:1104418/1‑93 (MQ=255)
cccGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCCCAACTGGCAGACGCCATCg > 2:2387733/1‑93 (MQ=255)
gTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCa < 2:5771021/93‑1 (MQ=255)
gTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCa > 1:3114499/1‑93 (MQ=255)
gcgcAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCaga < 1:5655553/93‑1 (MQ=255)
gcgcAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCaga < 1:4534789/93‑1 (MQ=255)
ccgcAAGGGGGCATAATGCCCCATGTCAACCCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCaga < 1:1740168/92‑1 (MQ=255)
cgcAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCagag < 1:1075098/93‑1 (MQ=255)
cgcAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCagag < 1:144456/93‑1 (MQ=255)
gcAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGc > 2:3491992/1‑93 (MQ=255)
gcAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGc > 1:4649919/1‑93 (MQ=255)
aGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGt > 1:4167413/1‑93 (MQ=255)
aGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGt < 2:1567096/93‑1 (MQ=255)
ggcggcGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGta < 1:1342145/93‑1 (MQ=255)
cggcgTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGtata < 1:4109671/93‑1 (MQ=255)
ggcgTAATGCGCCATGTCACACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATAc > 1:3583016/1‑93 (MQ=255)
ggTAGTGCGCGATGTCAACCCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGc < 2:81753/92‑1 (MQ=255)
gTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCt > 2:908807/1‑93 (MQ=255)
gTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCt > 2:1482093/1‑93 (MQ=255)
tAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCtt > 2:953132/1‑93 (MQ=255)
aaTGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTg < 1:6186268/93‑1 (MQ=255)
aaTGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTg > 2:3129808/1‑93 (MQ=255)
|
GCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGA > NC_000913/744600‑744779
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCA > NC_000913/744597‑744783
|
CATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGC > SRR4302533.481815/1‑94 (MQ=60)
CATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGC > SRR4302533.2120592/1‑94 (MQ=60)
ATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCC < SRR4302533.4615959/94‑1 (MQ=60)
ATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCC > SRR4302533.603648/1‑94 (MQ=60)
ATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCC > SRR4302533.4776070/1‑94 (MQ=60)
ATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCC > SRR4302533.3794234/1‑94 (MQ=60)
ATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCC > SRR4302533.5244349/1‑94 (MQ=60)
TGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCA > SRR4302533.2990005/1‑94 (MQ=60)
TGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCA < SRR4302533.1894603/94‑1 (MQ=60)
CAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATG > SRR4302533.2027890/1‑94 (MQ=60)
AGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGT < SRR4302533.3565207/94‑1 (MQ=60)
AGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGT > SRR4302533.4865256/1‑94 (MQ=60)
AGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGT > SRR4302533.4865257/1‑94 (MQ=60)
CTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCA > SRR4302533.5302466/1‑94 (MQ=60)
CTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCA > SRR4302533.5649329/1‑94 (MQ=60)
TGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAA < SRR4302533.2708678/94‑1 (MQ=60)
TGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAA > SRR4302533.6303664/1‑94 (MQ=60)
TGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAA > SRR4302533.5139923/1‑94 (MQ=60)
CCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAAC < SRR4302533.4382071/94‑1 (MQ=60)
CCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAAC < SRR4302533.6265852/94‑1 (MQ=60)
CGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCACACC > SRR4302533.5609384/1‑94 (MQ=60)
CGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACC > SRR4302533.5858017/1‑94 (MQ=60)
GCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCG < SRR4302533.5884470/94‑1 (MQ=60)
GCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCG < SRR4302533.2395665/94‑1 (MQ=60)
GCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCG > SRR4302533.1125724/1‑94 (MQ=60)
GCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCG > SRR4302533.3739229/1‑94 (MQ=60)
CCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGC < SRR4302533.3317608/94‑1 (MQ=60)
CCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGC > SRR4302533.790318/1‑94 (MQ=60)
CCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGC > SRR4302533.734675/1‑94 (MQ=60)
CAGAAACCGTTTACGCCGAGACGCTGTATCAAATGGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCA < SRR4302533.2369247/94‑1 (MQ=60)
CAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCA > SRR4302533.3823643/1‑94 (MQ=60)
AGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGACTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCAC > SRR4302533.3632519/1‑94 (MQ=60)
GAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACG < SRR4302533.4028424/94‑1 (MQ=60)
AAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGG < SRR4302533.2579959/94‑1 (MQ=60)
AAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGG > SRR4302533.6137437/1‑94 (MQ=60)
AACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGC > SRR4302533.3844797/1‑94 (MQ=60)
AACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGC > SRR4302533.4911555/1‑94 (MQ=60)
ACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCA > SRR4302533.4208471/1‑94 (MQ=60)
CCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAT > SRR4302533.842186/1‑94 (MQ=60)
CGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATG < SRR4302533.535203/94‑1 (MQ=60)
CGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATG > SRR4302533.4872219/1‑94 (MQ=60)
GTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGT < SRR4302533.2805657/94‑1 (MQ=60)
TTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTT < SRR4302533.1572883/94‑1 (MQ=60)
TTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTT < SRR4302533.3268422/94‑1 (MQ=60)
TTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTG < SRR4302533.3080542/94‑1 (MQ=60)
TACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTCT < SRR4302533.5977717/94‑1 (MQ=60)
ACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTA > SRR4302533.823807/1‑94 (MQ=60)
CGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTAC < SRR4302533.2914210/94‑1 (MQ=60)
CCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAC > SRR4302533.3068494/1‑94 (MQ=60)
CCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAC > SRR4302533.4992864/1‑94 (MQ=60)
CCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAC < SRR4302533.701017/94‑1 (MQ=60)
CAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACC < SRR4302533.870019/94‑1 (MQ=60)
CAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACC < SRR4302533.1939394/94‑1 (MQ=60)
CAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACC < SRR4302533.2726678/94‑1 (MQ=60)
GACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAG < SRR4302533.3761581/94‑1 (MQ=60)
GACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAG < SRR4302533.4950654/94‑1 (MQ=60)
GACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAG > SRR4302533.855659/1‑94 (MQ=60)
ACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGG < SRR4302533.2014414/94‑1 (MQ=60)
ACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGG < SRR4302533.4332433/94‑1 (MQ=60)
ACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGG < SRR4302533.5816617/94‑1 (MQ=60)
GCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCG < SRR4302533.3202938/94‑1 (MQ=60)
GCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCG > SRR4302533.749149/1‑94 (MQ=60)
GCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCG < SRR4302533.6247408/94‑1 (MQ=60)
TGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGC < SRR4302533.6006344/94‑1 (MQ=60)
GTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCG < SRR4302533.5405377/94‑1 (MQ=60)
TATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGA < SRR4302533.4417013/94‑1 (MQ=60)
CAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAG < SRR4302533.735974/94‑1 (MQ=60)
CAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAG < SRR4302533.2918292/94‑1 (MQ=60)
ATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAG > SRR4302533.2298069/1‑94 (MQ=60)
ATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAG > SRR4302533.2463208/1‑94 (MQ=60)
ATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAG < SRR4302533.6002171/94‑1 (MQ=60)
ATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAG < SRR4302533.667777/94‑1 (MQ=60)
TTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGC < SRR4302533.2127142/94‑1 (MQ=60)
TTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGC < SRR4302533.4955222/94‑1 (MQ=60)
TGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCA < SRR4302533.6070822/94‑1 (MQ=60)
GCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACA > SRR4302533.4842996/1‑94 (MQ=60)
GCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACA > SRR4302533.5789237/1‑94 (MQ=60)
GCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACA < SRR4302533.2872301/94‑1 (MQ=60)
GCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAAC < SRR4302533.5236447/94‑1 (MQ=60)
GCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAAC < SRR4302533.5871660/94‑1 (MQ=60)
CGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACT < SRR4302533.1898383/94‑1 (MQ=60)
CGCTGGCAACGATTGCCAGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACT < SRR4302533.3786655/94‑1 (MQ=60)
CTGGCAACGATTGCGCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGG < SRR4302533.1853817/94‑1 (MQ=60)
CTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGG < SRR4302533.5904966/94‑1 (MQ=60)
CTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGG > SRR4302533.2884782/1‑94 (MQ=60)
CTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGG > SRR4302533.5422435/1‑94 (MQ=60)
TGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGC < SRR4302533.848092/94‑1 (MQ=60)
GCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAG > SRR4302533.324919/1‑94 (MQ=60)
GCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAG < SRR4302533.5716277/94‑1 (MQ=60)
GCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAG < SRR4302533.6131754/94‑1 (MQ=60)
AACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGAC < SRR4302533.1395435/94‑1 (MQ=60)
AACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGAC < SRR4302533.2606340/94‑1 (MQ=60)
AACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGAC > SRR4302533.2450853/1‑94 (MQ=60)
ACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACG < SRR4302533.3299558/94‑1 (MQ=60)
ACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCACGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACG < SRR4302533.634668/94‑1 (MQ=60)
CGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGC < SRR4302533.1082697/94‑1 (MQ=60)
CGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGC > SRR4302533.2068347/1‑94 (MQ=60)
CGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGC < SRR4302533.3199394/94‑1 (MQ=60)
CGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGC < SRR4302533.636632/94‑1 (MQ=60)
TGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATC > SRR4302533.1110959/1‑94 (MQ=60)
GCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCG > SRR4302533.4068818/1‑94 (MQ=60)
CCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCC > SRR4302533.4569176/1‑94 (MQ=60)
CGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCA > SRR4302533.3133651/1‑94 (MQ=60)
GCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAG < SRR4302533.5689729/94‑1 (MQ=60)
GCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAG < SRR4302533.4562248/94‑1 (MQ=60)
GCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAG < SRR4302533.4918489/94‑1 (MQ=60)
CCGCAAGGGGGCATAATGCCCCATGTCAACCCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAG < SRR4302533.1750720/94‑1 (MQ=60)
CGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGC < SRR4302533.1081435/94‑1 (MQ=60)
CGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGC > SRR4302533.4199730/1‑94 (MQ=60)
CGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGC > SRR4302533.4678093/1‑94 (MQ=60)
CGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGC < SRR4302533.145380/94‑1 (MQ=60)
GCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCG > SRR4302533.4689698/1‑94 (MQ=60)
GCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCG > SRR4302533.616441/1‑94 (MQ=60)
CAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGG > SRR4302533.4161858/1‑94 (MQ=60)
CAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGG > SRR4302533.488573/1‑94 (MQ=60)
AAGTCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGT < SRR4302533.3797489/94‑1 (MQ=60)
AAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGT > SRR4302533.4192669/1‑94 (MQ=60)
GGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTAT < SRR4302533.1350226/94‑1 (MQ=60)
GGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTAT < SRR4302533.2020243/94‑1 (MQ=60)
GCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATA < SRR4302533.4281534/94‑1 (MQ=60)
CGGCGTAATGCGCCATGTCACACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATAC > SRR4302533.3605082/1‑94 (MQ=60)
CGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATAC < SRR4302533.4134655/94‑1 (MQ=60)
CGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATAC < SRR4302533.4344508/94‑1 (MQ=60)
CGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATAC < SRR4302533.2444960/94‑1 (MQ=60)
CGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATAC > SRR4302533.5587518/1‑94 (MQ=60)
GGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACG < SRR4302533.3243191/94‑1 (MQ=60)
CGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCT < SRR4302533.5871266/94‑1 (MQ=60)
GTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCCTCCCCACAGCGGTTTCCGCTT > SRR4302533.5092328/1‑94 (MQ=60)
GTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTT < SRR4302533.166522/94‑1 (MQ=60)
GTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTT < SRR4302533.4017496/94‑1 (MQ=60)
TAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTG < SRR4302533.834409/94‑1 (MQ=60)
TAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTG < SRR4302533.4964855/94‑1 (MQ=60)
AATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGC < SRR4302533.6223402/94‑1 (MQ=60)
TGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGA > SRR4302533.425077/1‑94 (MQ=60)
CGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGTGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATC < SRR4302533.6159121/94‑1 (MQ=60)
CGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATC > SRR4302533.1977709/1‑94 (MQ=60)
GCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCC > SRR4302533.1069151/1‑94 (MQ=60)
GCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCC > SRR4302533.4359840/1‑94 (MQ=60)
GCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCC > SRR4302533.4538418/1‑94 (MQ=60)
CCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGTCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCA < SRR4302533.5624183/94‑1 (MQ=60)
CCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCA > SRR4302533.1254842/1‑94 (MQ=60)
CCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCA > SRR4302533.5786306/1‑94 (MQ=60)
|
CATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCA > NC_000913/744597‑744783
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
